CK740261

Overview
NameCK740261
Unique NameCK740261
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length686
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:462..1148. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.199e-16
Identity = 59/193 (30.57%), Postives = 90/193 (46.63%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLY-PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            +   GGP   ++TGRRDG +S    ++   P    S++  ++ F +IG +   +VAL+G  H+VG  HC     R+  P++D  L        L K      DP        D+ TP  +DN  YR ++  + ++ +D  L  D  TR  V   A +   F + F+ A+  + E   LTG  GEIR  C   N
Sbjct:  128 IALAGGPKFKVRTGRRDGLRSNPSDVKLLGP--TVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRIKDPKMDSKLRAK-----LKKSCRGPNDPSVFM----DQNTPFRVDNEIYRQMIQQRAILRIDDNLIRDGSTRSIVSDFAYNNKLFKESFAEAMQKMGEIGVLTGDSGEIRTNCRAFN 309          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 61/192 (31.77%), Postives = 88/192 (45.83%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVC 565
            V   GGP   +  GR+DGR S+A I  + LP    ++S + + F   G+    LVAL G H++G  HC    +RL+      EVDP LNP     +   CP       A     N  GT    DN YY+ ++  K L   D  L     T+  V K A S + F + F +++  +S    ++G   E+R  C
Sbjct:  129 VALSGGPTWAVPKGRKDGRISKA-IETRQLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCPAHNTVKNAGS---NMDGTVTSFDNIYYKMLIQGKSLFSSDESLLAVPSTKKLVAKYANSNEEFERAFVKSMIKMSS---ISGNGNEVRLNC 313          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16
Identity = 57/192 (29.69%), Postives = 85/192 (44.27%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIG-IDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VVALGGP   +  GRRD   +        LP  N S + +   F   G ++   +VAL G+H++G+  C     R+Y   D  +N  +   +   CP  +           D  T    DN YY N++  KGL+  D  L  +  T   V+  A +   F   F+ A+  +    P TGT+G+IR  C+  N
Sbjct:  125 VVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGG-DTNINAAYAASLRANCPQTVGSGDG-SLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQIRLSCSRVN 314          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.091e-15
Identity = 56/187 (29.95%), Postives = 87/187 (46.52%), Query Frame = 2
Query:   44 GRRDGRKSRA-EILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE--------VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GRRDGR S A E ++  LP    +   + + F A  +    +V L G+H+VGR+ C     R++          VD  L+P +   +   CP        +     D GTP VLDNNYY+ +    GL   D+QL  + +    V   A ++  + ++F+ A+  +      TGT GE+R  C + N
Sbjct:  156 GRRDGRVSNATETVD--LPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAM-DPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNPQMAALVSSFASNETLWKEKFAAAMVKMGRIQVQTGTCGEVRLNCGVVN 339          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15
Identity = 54/191 (28.27%), Postives = 95/191 (49.74%), Query Frame = 2
Query:   20 GPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVAL-LGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRP----YVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GP+  + TGRRDG  +  +  +  LPD  DS++ +  +F   G+    LV L  G+H++G T C  ++ RL  + DP +NP+    +  KCP        +     D  +  V DN  ++NI + +G+++ D  L  D   +     Y++    S+  F  +F++A+  +       G +GEIR++C+  N
Sbjct:  134 GPFYEVPTGRRDGLIANVDHAKN-LPDVQDSINTLKSKFREKGLSDQDLVLLSAGAHTIGTTACFFVIPRLDAQ-DPTINPEFFQILRSKCPQGGDVNVRIPL---DWDSQFVFDNQIFQNIKNGRGVILSDSVLYQDNNMKKIIDSYLETNQSSKANFAADFTKAMIKMGAIGVKIGAEGEIRRLCSATN 319          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 50/156 (32.05%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  116 SVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLANK 580
            S ++  FA   +D   LV+L G+H+ G  HC     R      +PA++      + +KC    P     Q +  D  TP V DN YY +++  +GL   D  L     T+    + + +Q  FF++F+R++T +S  + LTGTKGEIR  C + N+
Sbjct:    1 STLISSFANRSLDVADLVSLSGAHTFGVAHCPAFEDRSSRVRHNPAIDGKFATALRNKCSGDNPSGTLTQKL--DVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHPTTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEIRNNCAVPNR 154          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 57/185 (30.81%), Postives = 87/185 (47.03%), Query Frame = 2
Query:   35 LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVH-RLYPEVDPALNPDHVPHMLHKCPD---AIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            + +GR DG  S A    ++L     ++S +   FA  G+    LV L G+H+VGR+HC   V  RL  +V   +NP     +  +CP       DP  +Q    D  TP  +D  YY+N+L +  L   D  L T   T   V   AK   ++  +F +A+  ++     TG +G++RK C   N
Sbjct:  155 MPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFVSDRL--DVPSDINPALAAFLRTRCPPNTTTSDDPTVMQ----DVVTPNAMDIQYYKNVLSHTVLFTSDAALLTSPETAKLVLDNAKIPGWWEDKFEKAMVKMASLEVKTGHQGQVRKNCRAIN 333          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.207e-14
Identity = 57/204 (27.94%), Postives = 94/204 (46.08%), Query Frame = 2
Query:    5 VVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCP----DAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD----KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            VV  GGP   +  GR+DG  +        LP   + +  ++ +F A+ ++   +VAL G+H+ G+  C    +RL+        D  L    + ++   CP      I  P        DR T    DNNY++N+L+ KGL+  D  L +       T+  V+  ++SQ  FF++F+ A  ++   N   G  GE+R  C + N
Sbjct:  134 VVLSGGPGWRVALGRKDGLVANQNSANN-LPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPL-------DRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCA--MIRMGNISNGASGEVRTNCRVIN 327          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.511e-14
Identity = 53/196 (27.04%), Postives = 93/196 (47.45%), Query Frame = 2
Query:   17 GGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATD----KRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            GGP   +  GR+DG  +        LP   + +  ++ +FAA+G++   +VAL G+H+ G+  C    +RL+        D  L    +  +   CP      K       DR +    DNNY++N+L+ KGL+  D  L +       T+  V+  ++SQ  FF++F+   +++   + + G  GE+R  C + N
Sbjct:  138 GGPQWRVALGRKDGLVANQSSANN-LPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPL---DRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFRDFT--CSMIRMGSLVNGASGEVRTNCRVIN 327          
BLAST of CK740261 vs. ExPASy Swiss-Prot
Match: PERX_LUPPO (Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 4.586e-14
Identity = 46/161 (28.57%), Postives = 80/161 (49.69%), Query Frame = 2
Query:   95 PDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKVCNLAN 577
            P  +  ++ +  +FAA G+    L  L G H++G++ C     R+Y + +  ++ +        CP +      +  +  D  TP   DNNYY++++ N+GL+  D  L         V+  + +   FF +F+ AI  +S+ +PLTG  GEIRK C + N
Sbjct:    2 PGPSSDLTTLTTKFAAKGLTPSDLTVLSGGHTIGQSECQFFKTRIYNDTN--IDTNFATSRQANCPFSAGGETNLAPL--DSLTPNRFDNNYYKDLVSNRGLLHSDQVLFNGGSQDTLVRTYSTNNVKFFSDFAAAIVKMSKISPLTGIAGEIRKNCRVIN 158          
The following BLAST results are available for this feature:
BLAST of CK740261 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER8_ARATH2.199e-1630.57Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER64_ARATH8.357e-1631.77Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER1_HORVU8.357e-1629.69Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER1_MAIZE1.091e-1529.95Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER13_ARATH2.432e-1528.27Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER2_HORVU4.148e-1532.05Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PER2_MAIZE7.075e-1530.81Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER59_ARATH1.207e-1427.94Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PERN_ARMRU3.511e-1427.04Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PERX_LUPPO4.586e-1428.57Peroxidase (Fragment) OS=Lupinus polyphyllus PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6403 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63A08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740261 ID=CK740261; Name=CK740261; organism=Citrus sinensis; type=EST; length=686bp
TGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAA
GAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGAT
CACAACGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCAT
TGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAA
CTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCA
CTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGCAAT
CCCAGACCCCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCA
TGGTGCTGGACAACAACTACTATAGGAACATATTGGACAACAAGGGCTTG
ATGATGGTTGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGT
TAAGAAGATGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAG
CCATTACTCTCCTTTCTGAGAACAACCCTCTCACAGGTACAAAGGGTGAG
ATCCGAAAGGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCT
AGCTAACAGCTGTATTAGCTACACAAGTTAATAGCTCCAAATTTTTCTTC
CTTGTTTCTTCTATGAGGAAGAAAGAGTGTGAGATG
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