CK740274

Overview
NameCK740274
Unique NameCK740274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_PICAN (Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 7.742e-12
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP 192
            VPG+  SND +LQ+R+FSY DT RHRLGPNY Q+PVN P
Sbjct:  330 VPGMEPSNDPVLQSRLFSYPDTHRHRLGPNYHQIPVNCP 368          

HSP 2 Score: 28.8758 bits (63), Expect = 7.742e-12
Identity = 11/20 (55.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:    9 LNKNIDNFFAENEQLAFCPA 68
            LN+N  N++AE EQ+AF P+
Sbjct:  308 LNENPKNYYAETEQIAFSPS 327          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATB_STAAA (Catalase-like protein OS=Staphylococcus aureus subsp. anaerobius GN=katB PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 1.008e-11
Identity = 43/130 (33.08%), Postives = 69/130 (53.08%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNN----HYDGFMNFMHRDE--EIDYFPS---RYDPVRHAEMHPTPPEICG---GRREKCIIPKENNFKQPGERYRSWAPDRQERFI 429
            +PG+ +S DK+LQ R+FSY D QR+RLG N+ Q+PVN PK     N      DG M  +  ++     Y+P+   ++D     +  P P +  G    +R+      +N F+QPG+ +R  +   +ER +
Sbjct:  321 IPGLDFSPDKMLQGRLFSYGDAQRYRLGVNHWQIPVNQPKGVGIENICPFSRDGQMRVVDNNQGGGTHYYPNNHGKFDSQPEYKKPPFPTDGYGYEYNQRQ----DDDNYFEQPGKLFRLQSEGAKERIL 446          

HSP 2 Score: 25.7942 bits (55), Expect = 1.008e-11
Identity = 10/17 (58.82%), Postives = 14/17 (82.35%), Query Frame = 3
Query:    9 LNKNIDNFFAENEQLAF 59
            LN+N DN+F + EQ+AF
Sbjct:  299 LNRNPDNYFMDVEQVAF 315          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_TOXGO (Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.305e-11
Identity = 41/114 (35.96%), Postives = 61/114 (53.51%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNH--YDGFMNF-MHRDEEIDYFPSRYDPVRHAEMHPTPPEICGGRREKCIIPKE---NNFKQPGERYRS 399
            VPGI  S D++LQ R+FSY DT RHRLG NY Q+PVN P  A+  ++   DG M    ++  +++Y P+  D     + +                P+E   ++F+QPG  YR+
Sbjct:  329 VPGIEPSEDRMLQGRMFSYIDTHRHRLGANYHQIPVNRPWNARGGDYSVRDGPMCVDGNKGSQLNYEPNSVDGFPKEDRNAAVSGTTTVSGTVACHPQEHPNSDFEQPGNFYRT 442          

HSP 2 Score: 28.8758 bits (63), Expect = 1.305e-11
Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAFCPA 68
            LVL++N +N+F + EQ AF PA
Sbjct:  305 LVLDRNPENYFQDVEQAAFAPA 326          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATE_RHIME (Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 1.678e-11
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 1
Query:   79 PGIYYSNDKLLQTRIFSYADTQRHRLG-PNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRY 279
            PGI +S+D LLQ R FSY DTQ  RLG PN+  LP+NAPKC   +   DG M   +    ++Y P+ +
Sbjct:  358 PGIDFSDDPLLQGRNFSYLDTQLKRLGSPNFTHLPINAPKCPFQHFQQDGHMAMRNPVGRVNYQPNSW 425          

HSP 2 Score: 27.7202 bits (60), Expect = 1.678e-11
Identity = 12/19 (63.16%), Postives = 16/19 (84.21%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAF 59
            LVL++  +NFFAE EQ+AF
Sbjct:  333 LVLDRMPENFFAETEQVAF 351          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_LACSK (Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.601e-11
Identity = 47/121 (38.84%), Postives = 63/121 (52.07%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNFMHRDEEIDYFPSRYD---PVRHAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFI 429
            VPGI  S DKLLQ R+F Y D +R+RLG NY QLPVN PK   HN   DG M   ++   ++Y P+  D    V  A++H    ++ G        P  + +   G+ YR  + D Q R I
Sbjct:  318 VPGIEASPDKLLQGRLFGYKDAERYRLGANYEQLPVNRPKVPVHNYERDGAM-AQNQATGVNYEPNSQDGPTEVPAAKIH--GDQLSGTTGNFSADP--DYYSAAGKLYRLLSADEQTRLI 433          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: BCA_STRVL (Bromoperoxidase-catalase OS=Streptomyces violaceus GN=bca PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 2.859e-11
Identity = 42/123 (34.15%), Postives = 61/123 (49.59%), Query Frame = 1
Query:   73 WVPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNH-YDGFMNFMHRDEEIDYFPSRY-DPVR--HAEMHPTPPEICGGRREKCIIPKENNFKQPGERYRSWAPDRQERFI 429
            +VPGI  S DK+LQ R+F+Y D  R+R+G N   LPVN P   +   H  DGF+         +Y P+ +  PV+       PTP     G        ++++F Q G+ YR  + D + R I
Sbjct:  318 FVPGIGPSPDKMLQGRLFAYGDAHRYRVGINADHLPVNRPHATEARTHSRDGFLYDGRHKGAKNYEPNSFGGPVQTDRPLWQPTPVTGVTGDHAAPSHAEDDDFTQAGDLYRLMSEDEKGRLI 440          

HSP 2 Score: 27.7202 bits (60), Expect = 2.859e-11
Identity = 13/22 (59.09%), Postives = 15/22 (68.18%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAFCPA 68
            L LN+N +N FAE EQ  F PA
Sbjct:  295 LELNRNPENIFAEVEQSIFSPA 316          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_ONCVE (Catalase OS=Onchocerca volvulus endobacterium GN=cat PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 4.816e-11
Identity = 34/92 (36.96%), Postives = 52/92 (56.52%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAPKCAQHNNHYDGFMNF-MHRDEEIDYFPSRY-DPVRHAEMHPTPPEICGGRREK 345
            VPG+  S D++LQ R+F+YAD  R+R+G N+ QLPVNAP+   ++   DG M F  +     +Y P+ Y D  + A  +  P     G  ++
Sbjct:  320 VPGVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPVNAPRSPVNSYQRDGSMAFGSNGGAAPNYEPNSYADAPKQAPQYAEPALALSGAADR 411          

HSP 2 Score: 26.9498 bits (58), Expect = 4.816e-11
Identity = 13/22 (59.09%), Postives = 16/22 (72.73%), Query Frame = 3
Query:    3 LVLNKNIDNFFAENEQLAFCPA 68
            L LN+N  N+FAE EQ AF P+
Sbjct:  296 LELNRNPLNYFAEVEQAAFGPS 317          
BLAST of CK740274 vs. ExPASy Swiss-Prot
Match: CATA_CANBO (Peroxisomal catalase OS=Candida boidinii GN=CTA1 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 6.243e-11
Identity = 26/39 (66.67%), Postives = 31/39 (79.49%), Query Frame = 1
Query:   76 VPGIYYSNDKLLQTRIFSYADTQRHRLGPNYLQLPVNAP 192
            VPG+  SND +LQ+R+FSY DT RHRLG NY Q+PVN P
Sbjct:  327 VPGMEPSNDPVLQSRLFSYPDTHRHRLGVNYSQIPVNCP 365          

HSP 2 Score: 28.8758 bits (63), Expect = 6.243e-11
Identity = 12/20 (60.00%), Postives = 15/20 (75.00%), Query Frame = 3
Query:    9 LNKNIDNFFAENEQLAFCPA 68
            LN+N  N+FAE EQ AF P+
Sbjct:  305 LNENAQNYFAEVEQAAFSPS 324          
The following BLAST results are available for this feature:
BLAST of CK740274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
CATA_PICAN7.742e-1269.23Peroxisomal catalase OS=Pichia angusta GN=PXP9 PE=... [more]
CATB_STAAA1.008e-1133.08Catalase-like protein OS=Staphylococcus aureus sub... [more]
CATA_TOXGO1.305e-1135.96Peroxisomal catalase OS=Toxoplasma gondii PE=2 SV=... [more]
CATE_RHIME1.678e-1147.06Catalase C OS=Rhizobium meliloti GN=katE PE=2 SV=2[more]
CATA_LACSK2.601e-1138.84Catalase OS=Lactobacillus sakei GN=katA PE=3 SV=2[more]
BCA_STRVL2.859e-1134.15Bromoperoxidase-catalase OS=Streptomyces violaceus... [more]
CATA_ONCVE4.816e-1136.96Catalase OS=Onchocerca volvulus endobacterium GN=c... [more]
CATA_CANBO6.243e-1166.67Peroxisomal catalase OS=Candida boidinii GN=CTA1 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6417 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740274 ID=CK740274; Name=CK740274; organism=Citrus sinensis; type=EST; length=515bp
GGTTGGTTTTGAACAAGAACATTGATAACTTCTTTGCAGAGAATGAACAG
CTTGCTTTCTGCCCTGCTATTGTGGGTTCCTGGCATCTACTATTCAAATG
ATAAGTTGCTCCAGACTCGAATCTTCTCCTATGCTGATACTCAGAGGCAC
CGTCTAGGGCCGAACTATCTTCAACTCCCAGTAAATGCACCCAAATGTGC
TCAGCACAACAATCATTATGACGGTTTCATGAATTTCATGCACAGGGATG
AGGAGATCGATTACTTCCCTTCAAGGTATGATCCTGTCCGTCATGCTGAG
ATGCATCCAACTCCTCCTGAAATCTGCGGCGGAAGGCGCGAGAAGTGCAT
AATTCCAAAGGAAAACAACTTCAAACAACCTGGAGAGAGATACCGATCTT
GGGCACCAGACAGGCAAGAGCGATTCATCTGCAGATGGGTTGATGCTTTA
TCTGATCCACGCGTCACCCATGAGATCCCGCCACATATGGATCTCATACT
GGTCTCAGGCTTGCA
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