CK740279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 54/155 (34.84%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 166 IFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEA 624 +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R +++ L++ L ++L+ A LL+ ANKQDLP+A++A E+ L L L +R +A Sbjct: 12 LFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRQRSWYIQA 157
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARF6_RAT (ADP-ribosylation factor 6 OS=Rattus norvegicus GN=Arf6 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 166 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDER 606 IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K WD+GGQ +R +W YY ++FV+D A R ++++ L + + + +++ A +LI ANKQDLPDA+ E+ L L ++ +R Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-------IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDR 147
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARF6_PIG (ADP-ribosylation factor 6 OS=Sus scrofa GN=ARF6 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 166 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDER 606 IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K WD+GGQ +R +W YY ++FV+D A R ++++ L + + + +++ A +LI ANKQDLPDA+ E+ L L ++ +R Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-------IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDR 147
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARF6_MOUSE (ADP-ribosylation factor 6 OS=Mus musculus GN=Arf6 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 166 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDER 606 IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K WD+GGQ +R +W YY ++FV+D A R ++++ L + + + +++ A +LI ANKQDLPDA+ E+ L L ++ +R Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-------IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDR 147
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARF6_HUMAN (ADP-ribosylation factor 6 OS=Homo sapiens GN=ARF6 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 166 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDER 606 IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K WD+GGQ +R +W YY ++FV+D A R ++++ L + + + +++ A +LI ANKQDLPDA+ E+ L L ++ +R Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-------IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDR 147
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARF6_CHICK (ADP-ribosylation factor 6 OS=Gallus gallus GN=ARF6 PE=2 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 55/147 (37.41%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 166 IFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDER 606 IF E +L+LG+D AGKTT+L KLK S +PTVG N+ + N K WD+GGQ +R +W YY ++FV+D A R ++++ L + + + +++ A +LI ANKQDLPDA+ E+ L L ++ +R Sbjct: 8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQSVTT-------IPTVGFNVETVTYKNVKFNVWDVGGQDKIRPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQEKLGLTRIRDR 147
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARF4_RAT (ADP-ribosylation factor 4 OS=Rattus norvegicus GN=Arf4 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 55/159 (34.59%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 154 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEA 624 L+ +F K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++ L+K L ++LQ A LL+ ANKQDLP+A++ E+ L L+ L R +A Sbjct: 8 LFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQA 157
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARF4_MOUSE (ADP-ribosylation factor 4 OS=Mus musculus GN=Arf4 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 55/159 (34.59%), Postives = 90/159 (56.60%), Query Frame = 1 Query: 154 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEA 624 L+ +F K + +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++ L+K L ++LQ A LL+ ANKQDLP+A++ E+ L L+ L R +A Sbjct: 8 LFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAAVLQKMLLEDELQDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQA 157
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.034e-23 Identity = 55/159 (34.59%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 154 LWKYIFTKTEFHVLILGIDKAGKTTLLEKLK--SVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDERVCMFEA 624 L++ +F K E +L++G+D AGKTT+L KLK + + + PT+G N+ +E N WD+GGQ +R +W Y++ ++FV+D+ R ++ L++ L ++L+ A LL+ ANKQDLP+A++A E+ L L L R +A Sbjct: 8 LFQSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTTI---------PTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRHRQWYIQA 157
BLAST of CK740279 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.656e-23 Identity = 55/165 (33.33%), Postives = 94/165 (56.97%), Query Frame = 1 Query: 127 LEMFSLFYGLWKYIFTKTEFHVLILGIDKAGKTTLLEKLKSVYSNVEGLPPDRIVPTVGLNIGRIEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVVFVIDAACPSRFEDSKTALEKGLRNEDLQGAPLLILANKQDLPDAVSADELARYLDLKKLDER-VCMF 618 L + S ++ +F K E + ++G+ +GKTT + + S G + ++PTVG N+ ++ N + WD+GGQP RS+WE+Y +A+V++IDAA + E S+ L L LQG P+L+L NK+DLP+A+ +L ++L + +R +C + Sbjct: 2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIAS------GQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCY 160 The following BLAST results are available for this feature:
BLAST of CK740279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 219
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740279 ID=CK740279; Name=CK740279; organism=Citrus sinensis; type=EST; length=626bpback to top |