CK740280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: CENPA_MOUSE (Histone H3-like centromeric protein A OS=Mus musculus GN=Cenpa PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.026e-21 Identity = 61/133 (45.86%), Postives = 77/133 (57.89%), Query Frame = 3 Query: 39 RTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIR 431 R QT R+ AP + V L R R + L+EI+ QKST+LL RK PF +VREI + F D +Q+ A+LALQEAAEA+L+ LFED L ++HA RVT+ PKDIQL RRIR Sbjct: 5 RKPQTPRRRPSSPAPGPSRQSSSVGSQTL----------RRRQKFMWLKEIKTLQKSTDLLFRKKPFSMVVREICEKFSRGVDFWWQAQALLALQEAAEAFLIHLFEDAYLLSLHAGRVTLFPKDIQLTRRIR 127
BLAST of CK740280 vs. ExPASy Swiss-Prot
Match: H3L2_LILLO (Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE=2 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 1.731e-13 Identity = 46/101 (45.54%), Postives = 55/101 (54.46%), Query Frame = 3 Query: 33 MARTKQTARKSTGGKAPRKQPRHKGVQENLLQQPGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAY 335 MAR K TAR STGGKAPRKQ K +++ GVK+P G RKLPFQ LVR+I QD KT LRF++H+V L+E E Y Sbjct: 1 MARMKHTARMSTGGKAPRKQLASKALRKAPPPPTKGVKQPTTTTSGKWRFARFH----------RKLPFQGLVRKIWQDLKTHLRFKNHSVPPLEEVTEVY 91 The following BLAST results are available for this feature:
BLAST of CK740280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 192
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740280 ID=CK740280; Name=CK740280; organism=Citrus sinensis; type=EST; length=432bpback to top |