CK740285

Overview
NameCK740285
Unique NameCK740285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_FRATF (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=metK PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.555e-25
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 348
            C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  296 CEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          

HSP 2 Score: 45.8246 bits (107), Expect = 3.555e-25
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDP+KVDRSGAY+ R  AK+IVA G
Sbjct:  263 AFSGKDPSKVDRSGAYMGRYIAKNIVAAG 291          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_FRAT1 (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=metK PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.555e-25
Identity = 44/82 (53.66%), Postives = 59/82 (71.95%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 348
            C VQV+YAIGV +P+S+ V+++GTGKI D +I K+V E FD R G +  NLDL R     + KT+ YGHFGR+ P+FTWE +
Sbjct:  296 CEVQVAYAIGVAKPVSLMVNTFGTGKITDNQIEKLVAEVFDLRVGKIIENLDLLR---PIYRKTSNYGHFGRELPEFTWEKI 374          

HSP 2 Score: 45.8246 bits (107), Expect = 3.555e-25
Identity = 22/29 (75.86%), Postives = 25/29 (86.21%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDP+KVDRSGAY+ R  AK+IVA G
Sbjct:  263 AFSGKDPSKVDRSGAYMGRYIAKNIVAAG 291          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_PETMO (S-adenosylmethionine synthetase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=metK PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.624e-25
Identity = 41/85 (48.24%), Postives = 61/85 (71.76%), Query Frame = 1
Query:  106 IVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            ++Q+SYAIGV +P+S+ +D+ GT K+ +++I K+VKE FDFRP  +  NL+L +     + KTAAYGHFGR D +F WE +  +K
Sbjct:  312 LIQLSYAIGVAQPVSINIDTKGTAKVDEEKIYKVVKEIFDFRPAAIISNLNLLQ---PIYQKTAAYGHFGRKDVEFPWERLDKVK 393          

HSP 2 Score: 47.3654 bits (111), Expect = 4.624e-25
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANGPCSQV 104
            AFSGKDPTKVDRS  Y+ R  AK++VA+G   +V
Sbjct:  278 AFSGKDPTKVDRSATYMARYVAKNLVASGAADEV 311          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_THENN (S-adenosylmethionine synthetase OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=metK PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 4.625e-25
Identity = 39/79 (49.37%), Postives = 61/79 (77.22%), Query Frame = 1
Query:  106 IVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            ++Q+SYAIGV +P+S+ +D++GT K+ ++++LK++ E FDFRPG +   L+L R     + KTAAYGHFGR++ +FTWE
Sbjct:  306 LIQLSYAIGVAKPVSILIDTFGTAKVDEEKLLKVITEIFDFRPGAIIKKLNLLR---PIYRKTAAYGHFGRNEEEFTWE 381          

HSP 2 Score: 43.8986 bits (102), Expect = 4.625e-25
Identity = 20/29 (68.97%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRS  Y+ R  AK++VA G
Sbjct:  272 AFSGKDPTKVDRSAHYMARYVAKNVVAAG 300          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK2_RAT (S-adenosylmethionine synthetase isoform type-2 OS=Rattus norvegicus GN=Mat2a PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.625e-25
Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = 1
Query:  106 IVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKW 363
            +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK +FD RPG++  +LDLK+     + +TAAYGHFGRD   F WEV K LK+
Sbjct:  315 LVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKNNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD--SFPWEVPKKLKY 395          

HSP 2 Score: 44.669 bits (104), Expect = 4.625e-25
Identity = 22/34 (64.71%), Postives = 24/34 (70.59%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANGPCSQV 104
            AFSGKD TKVDRS AY  R  AKS+V  G C +V
Sbjct:  281 AFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRV 314          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_COXBN (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metK PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.625e-25
Identity = 41/80 (51.25%), Postives = 56/80 (70.00%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            C +QVSYAIGV EP S+ V+++GTGKI +    +++KE FD RPG +   L+L R     +  TA YGHFGR++P+FTWE
Sbjct:  296 CEIQVSYAIGVAEPTSISVETFGTGKIDEVRTQQLIKEHFDLRPGKIIEELNLLR---SIYKATATYGHFGREEPEFTWE 372          

HSP 2 Score: 45.8246 bits (107), Expect = 4.625e-25
Identity = 21/28 (75.00%), Postives = 23/28 (82.14%), Query Frame = 3
Query:    6 FSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            FSGKDP+KVDRSGAY  R  AK+IVA G
Sbjct:  264 FSGKDPSKVDRSGAYAARYVAKNIVAGG 291          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_RALEH (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metK PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.626e-25
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            C VQVSYAIGV  P++V V + GTGKIPD +I ++V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  297 CQVQVSYAIGVARPINVTVYTEGTGKIPDAKIAELVQEHFDLRPKGIVQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 373          

HSP 2 Score: 45.4394 bits (106), Expect = 4.626e-25
Identity = 21/33 (63.64%), Postives = 25/33 (75.76%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANGPCSQ 101
            AFSGKDP+KVDRS AY  R  AK++VA+G   Q
Sbjct:  264 AFSGKDPSKVDRSAAYAARYVAKNVVASGLARQ 296          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_BURPP (S-adenosylmethionine synthetase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=metK PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.018e-25
Identity = 42/80 (52.50%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            C++QVSYAIGV +P SV V+++GTG++ D  I ++V+E FD RP  +   LDL R     + K+AAYGHFGR++P+FTWE
Sbjct:  298 CLIQVSYAIGVAQPTSVMVNTFGTGRVSDATITRLVQEHFDLRPKGIIQMLDLLR---PIYEKSAAYGHFGREEPEFTWE 374          

HSP 2 Score: 43.8986 bits (102), Expect = 6.018e-25
Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANGPCSQ 101
            AFSGKDP+KVDRS AY  R  AK+IVA G  S+
Sbjct:  265 AFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASR 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_RALSO (S-adenosylmethionine synthetase OS=Ralstonia solanacearum GN=metK PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.018e-25
Identity = 45/80 (56.25%), Postives = 58/80 (72.50%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            C VQVSYAIGV  P+++ V + GTG IPD++I K+V+E FD RP  +   LDL R   G   KTAAYGHFGR++P+F+WE
Sbjct:  297 CQVQVSYAIGVARPINITVYTEGTGVIPDEQIAKLVQEHFDLRPKGIVQMLDLLRPIYG---KTAAYGHFGREEPEFSWE 373          

HSP 2 Score: 44.2838 bits (103), Expect = 6.018e-25
Identity = 21/33 (63.64%), Postives = 24/33 (72.73%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANGPCSQ 101
            AFSGKDP+KVDRS AY  R  AK++VA G   Q
Sbjct:  264 AFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQ 296          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_BURTA (S-adenosylmethionine synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metK PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.019e-25
Identity = 43/79 (54.43%), Postives = 59/79 (74.68%), Query Frame = 1
Query:  106 IVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            ++QVSYAIGV EP SV V+++GTG++ D+ I K+V+E FD RP  +   LDL R     + KTAAYGHFGR++P+F+WE
Sbjct:  299 LIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHFDLRPKGIIQMLDLLR---PIYEKTAAYGHFGREEPEFSWE 374          

HSP 2 Score: 43.8986 bits (102), Expect = 6.019e-25
Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANGPCSQ 101
            AFSGKDP+KVDRS AY  R  AK+IVA G  S+
Sbjct:  265 AFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASR 297          
The following BLAST results are available for this feature:
BLAST of CK740285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_FRATF3.555e-2553.66S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRAT13.555e-2553.66S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_PETMO4.624e-2548.24S-adenosylmethionine synthetase OS=Petrotoga mobil... [more]
METK_THENN4.625e-2549.37S-adenosylmethionine synthetase OS=Thermotoga neap... [more]
METK2_RAT4.625e-2553.49S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_COXBN4.625e-2551.25S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_RALEH4.626e-2556.25S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]
METK_BURPP6.018e-2552.50S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_RALSO6.018e-2556.25S-adenosylmethionine synthetase OS=Ralstonia solan... [more]
METK_BURTA6.019e-2554.43S-adenosylmethionine synthetase OS=Burkholderia th... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6428 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740285 ID=CK740285; Name=CK740285; organism=Citrus sinensis; type=EST; length=563bp
GTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTGGTGCATAC
ATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCCTTGCTCGCA
GGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCT
GTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGATCCT
CAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCA
ATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCC
TATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAAGTTGTGAA
GCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAA
AACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGATGAATAATT
TGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATCTCCTGTGTT
CAGAACTCATACATGTTCCCCCATTCAATTCCTTTCTTTTTCTTCTTTCC
CACTTCTTTTTTG
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