CK740285

Overview
NameCK740285
Unique NameCK740285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_ACIBY (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain AYE) GN=metK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.041e-21
Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD--FTWE 342
            C +QVSYAIGV EP S+ ++++GT K+ D+ I+++V+E FD RP  +T  L+L +     + +TAAYGHFGR+  +  FTWE
Sbjct:  296 CEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQ---PMYKQTAAYGHFGREGSNTAFTWE 374          

HSP 2 Score: 43.1282 bits (100), Expect = 6.041e-21
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDP+KVDRS AY  R  AK+IVA G
Sbjct:  263 AFSGKDPSKVDRSAAYAGRYVAKNIVAAG 291          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_OENOB (S-adenosylmethionine synthetase OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.041e-21
Identity = 38/78 (48.72%), Postives = 52/78 (66.67%), Query Frame = 1
Query:  109 VQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            +QV YAIGV  P+S+ +D++GT K+   +I  IV + FDFRP  +   LDL+R     +L+TAA+GHFGR D D  WE
Sbjct:  300 IQVGYAIGVARPVSIDLDTFGTEKVSIDKIYSIVDQVFDFRPLSIINQLDLRR---PIYLQTAAFGHFGRSDLDLPWE 374          

HSP 2 Score: 44.2838 bits (103), Expect = 6.041e-21
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKD TKVDRSGAY  R  AK++VA G
Sbjct:  265 AFSGKDATKVDRSGAYYARYVAKNLVAAG 293          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_SALDC (S-adenosylmethionine synthetase OS=Salmonella dublin (strain CT_02021853) GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.042e-21
Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 348
            C +QVSYAIGV EP S+ V+++GT K+P ++++ +V+E FD RP  +   LDL    +  + +TAAYGHFGR+  +F WE +
Sbjct:  295 CEIQVSYAIGVAEPTSIMVETFGTEKVPAEQLILLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGRE--NFPWEKI 371          

HSP 2 Score: 44.2838 bits (103), Expect = 6.042e-21
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDP+KVDRS AY  R  AK+IVA G
Sbjct:  262 AFSGKDPSKVDRSAAYAARYVAKNIVAAG 290          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_ACTSZ (S-adenosylmethionine synthetase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=metK PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.043e-21
Identity = 38/82 (46.34%), Postives = 57/82 (69.51%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 348
            C +Q+SYAIGV EP S+ ++++GTGK+ ++ ++K+V+E FD RP  +   LDL R     + +TAAYGHFGR+   F WE +
Sbjct:  295 CEIQLSYAIGVAEPTSIMLETFGTGKVANELLVKLVREFFDLRPYGLIQMLDLIR---PIYRETAAYGHFGRE--QFPWEKI 371          

HSP 2 Score: 44.2838 bits (103), Expect = 6.043e-21
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDP+KVDRS AY  R  AK+IVA G
Sbjct:  262 AFSGKDPSKVDRSAAYAARYVAKNIVAAG 290          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_SYNR3 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain RCC307) GN=metK PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.851e-21
Identity = 39/85 (45.88%), Postives = 55/85 (64.71%), Query Frame = 1
Query:  109 VQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLK-----RGGNGRFLKTAAYGHFGRDDPDFTWEVV 348
            VQ+SYAIGV +P+S+ V+S+GT    + E+ ++V  +FD RPG +  N  L+     RGGN  + + AAYGHFGR D +  WE V
Sbjct:  315 VQLSYAIGVAKPVSILVESFGTSSHSNDELTELVNANFDLRPGAIIENFKLRNLPQQRGGN-FYREVAAYGHFGRSDLNLPWEDV 398          

HSP 2 Score: 44.2838 bits (103), Expect = 7.851e-21
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRS AY  R  AK++VA G
Sbjct:  280 AFSGKDPTKVDRSAAYAARFVAKALVAAG 308          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_LACLA (S-adenosylmethionine synthetase OS=Lactococcus lactis subsp. lactis GN=metK PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.853e-21
Identity = 39/78 (50.00%), Postives = 52/78 (66.67%), Query Frame = 1
Query:  109 VQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            +Q+SYAIGV  P S+ VD++GTGK+ D E+L  +++ FD RP  +   LDL R   G   +TAAYGHFGR D +  WE
Sbjct:  311 IQLSYAIGVATPTSINVDTFGTGKVSDDELLAAIRKVFDLRPAGIIQMLDLLRPIYG---QTAAYGHFGRTDVELPWE 385          

HSP 2 Score: 41.5874 bits (96), Expect = 7.853e-21
Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKD TKVDRS +Y  R  AK+IVA G
Sbjct:  276 AFSGKDATKVDRSASYAARYVAKNIVAAG 304          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_LACH4 (S-adenosylmethionine synthetase OS=Lactobacillus helveticus (strain DPC 4571) GN=metK PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.853e-21
Identity = 38/80 (47.50%), Postives = 53/80 (66.25%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            C VQ++YAIGV  P+S+ +D+ GTGK+ D  + + V+  FD RP  +   LDL+R     + +TAAYGHFGR D D +WE
Sbjct:  307 CEVQLAYAIGVAHPVSIMIDTAGTGKVDDDLLTEAVRHVFDLRPAGIIKMLDLRR---PIYEQTAAYGHFGRTDVDLSWE 383          

HSP 2 Score: 41.5874 bits (96), Expect = 7.853e-21
Identity = 20/29 (68.97%), Postives = 22/29 (75.86%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKD TKVDRS +Y  R  AK+IVA G
Sbjct:  274 AFSGKDSTKVDRSASYAARYVAKNIVAAG 302          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_LISW6 (S-adenosylmethionine synthetase OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=metK PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.853e-21
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 1
Query:  109 VQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            VQ++YAIGV  P+S+ +D+YGT    ++E++  V   FD RP  +   LDL+R     + +TAA+GHFGR D D  WE
Sbjct:  311 VQLAYAIGVARPVSISIDTYGTSDYSEQELIDGVNALFDLRPAGIIHMLDLRR---PIYRQTAAFGHFGRSDLDLPWE 385          

HSP 2 Score: 48.9062 bits (115), Expect = 7.853e-21
Identity = 24/34 (70.59%), Postives = 26/34 (76.47%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANGPCSQV 104
            AFSGKDPTKVDRSGAY  R  AK+IVA G   +V
Sbjct:  276 AFSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKV 309          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_OCEIH (S-adenosylmethionine synthetase OS=Oceanobacillus iheyensis GN=metK PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.854e-21
Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 342
            C VQ++YAIGV +P+S+ V+++GTGK+ +  +++ V+E FD RP  +   LDL++     +  TAAYGHFGR D  F WE
Sbjct:  309 CEVQLAYAIGVAQPVSIAVNTFGTGKVSEDRLVEAVRELFDLRPAGIIRMLDLRK---PIYKNTAAYGHFGRKDILFPWE 385          

HSP 2 Score: 42.743 bits (99), Expect = 7.854e-21
Identity = 21/29 (72.41%), Postives = 22/29 (75.86%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKD TKVDRS AY  R  AK+IVA G
Sbjct:  276 AFSGKDATKVDRSAAYAARYVAKNIVAAG 304          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 7.854e-21
Identity = 41/91 (45.05%), Postives = 57/91 (62.64%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 369
            C +QVSYAIGV +P S+ ++++GTGKI D +I+ +V+  FD RP  +T  LDL    +  +  TAAYGHFGRD  + T   +      WEK
Sbjct:  296 CEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIDLVRAHFDLRPYAITNMLDLL---HPMYRATAAYGHFGRDPYEMTVGGKTFTAFPWEK 383          

HSP 2 Score: 43.1282 bits (100), Expect = 7.854e-21
Identity = 21/29 (72.41%), Postives = 23/29 (79.31%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDP+KVDRS AY  R  AK+IVA G
Sbjct:  263 AFSGKDPSKVDRSAAYAGRYVAKNIVAAG 291          
The following BLAST results are available for this feature:
BLAST of CK740285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIBY6.041e-2147.56S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_OENOB6.041e-2148.72S-adenosylmethionine synthetase OS=Oenococcus oeni... [more]
METK_SALDC6.042e-2146.34S-adenosylmethionine synthetase OS=Salmonella dubl... [more]
METK_ACTSZ6.043e-2146.34S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_SYNR37.851e-2145.88S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_LACLA7.853e-2150.00S-adenosylmethionine synthetase OS=Lactococcus lac... [more]
METK_LACH47.853e-2147.50S-adenosylmethionine synthetase OS=Lactobacillus h... [more]
METK_LISW67.853e-2144.87S-adenosylmethionine synthetase OS=Listeria welshi... [more]
METK_OCEIH7.854e-2146.25S-adenosylmethionine synthetase OS=Oceanobacillus ... [more]
METK_MARAV7.854e-2145.05S-adenosylmethionine synthetase OS=Marinobacter aq... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6428 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740285 ID=CK740285; Name=CK740285; organism=Citrus sinensis; type=EST; length=563bp
GTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTGGTGCATAC
ATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCCTTGCTCGCA
GGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCT
GTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGATCCT
CAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCA
ATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCC
TATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAAGTTGTGAA
GCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAA
AACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGATGAATAATT
TGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATCTCCTGTGTT
CAGAACTCATACATGTTCCCCCATTCAATTCCTTTCTTTTTCTTCTTTCC
CACTTCTTTTTTG
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