CK740285

Overview
NameCK740285
Unique NameCK740285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 8.760e-51
Identity = 77/92 (83.70%), Postives = 87/92 (94.57%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 378
            CIVQ+SYAIGVPEPLSVFVDSYGTGKIPD+EILK+VKE+FDFRPGM++INLDLK+GG  RF+KTAAYGHFGRDD DFTWEVVKPLK++K  A
Sbjct:  304 CIVQISYAIGVPEPLSVFVDSYGTGKIPDREILKLVKENFDFRPGMISINLDLKKGGK-RFIKTAAYGHFGRDDADFTWEVVKPLKFDKASA 394          

HSP 2 Score: 55.8398 bits (133), Expect = 8.760e-51
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYI RQAAKSI+A+G
Sbjct:  271 AFSGKDPTKVDRSGAYIARQAAKSIIASG 299          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_MESCR (S-adenosylmethionine synthetase OS=Mesembryanthemum crystallinum GN=METK PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 2.529e-50
Identity = 78/91 (85.71%), Postives = 84/91 (92.31%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 375
            CIVQ+SYAIGV EPLSVFVD+YGTGKI DK+ILKIVKE+FDFRPGM+  NLDL RGGN R+LKTAAYGHFGRDD DFTWEVVKPLKWEKPQ
Sbjct:  302 CIVQISYAIGVAEPLSVFVDTYGTGKISDKDILKIVKETFDFRPGMIANNLDLLRGGN-RYLKTAAYGHFGRDDADFTWEVVKPLKWEKPQ 391          

HSP 2 Score: 55.0694 bits (131), Expect = 2.529e-50
Identity = 27/29 (93.10%), Postives = 27/29 (93.10%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYI RQAAKSIVA G
Sbjct:  269 AFSGKDPTKVDRSGAYIARQAAKSIVAAG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK2_DIACA (S-adenosylmethionine synthetase 2 OS=Dianthus caryophyllus GN=SAM2 PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.599e-50
Identity = 77/92 (83.70%), Postives = 85/92 (92.39%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 378
            CIVQ+SYAIGVPEPLSVFVD+YGTGKI D+EILKIVKE+FDFRPGM+ I LDLK+GGN R+LKTAAYGHFGR+DPDFTWE  K LKWEKPQA
Sbjct:  306 CIVQISYAIGVPEPLSVFVDTYGTGKIHDREILKIVKENFDFRPGMIAIALDLKKGGN-RYLKTAAYGHFGREDPDFTWEAAKTLKWEKPQA 396          

HSP 2 Score: 53.1434 bits (126), Expect = 5.599e-50
Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFS KDPTKVDRSGAYI RQAAKSIVA+G
Sbjct:  273 AFSRKDPTKVDRSGAYIARQAAKSIVASG 301          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 7.300e-50
Identity = 74/86 (86.05%), Postives = 80/86 (93.02%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            CIVQVSYAIGVPEPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM INLDLKRGGN RF KTAAYGHFGRDDPDFTWEV+KPLK
Sbjct:  302 CIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWEVIKPLK 387          

HSP 2 Score: 56.9954 bits (136), Expect = 7.300e-50
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVATG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.515e-50
Identity = 75/86 (87.21%), Postives = 80/86 (93.02%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            CIVQVSYAIGVPEPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM INLDLKRGGN RF KTAAYGHFGRDDPDFTWEVVKPLK
Sbjct:  302 CIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAFDFRPGMMAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWEVVKPLK 387          

HSP 2 Score: 56.225 bits (134), Expect = 9.515e-50
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVAAG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.746e-49
Identity = 75/91 (82.42%), Postives = 83/91 (91.21%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTG--KIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 369
            C+VQVSYAIGVPEPLSVFVD+YGTG  KI D EILK++KE+FDFRPGM++INLDLKRGGN RF KTAAYGHFGR+DPDFTWE VK LKWEK
Sbjct:  302 CLVQVSYAIGVPEPLSVFVDTYGTGTGKIQDAEILKLIKENFDFRPGMISINLDLKRGGNMRFQKTAAYGHFGREDPDFTWETVKVLKWEK 392          

HSP 2 Score: 56.225 bits (134), Expect = 2.746e-49
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVAAG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 6.081e-49
Identity = 73/89 (82.02%), Postives = 82/89 (92.13%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 369
            CIVQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++K++FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPDF+WE VK LK EK
Sbjct:  302 CIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKKNFDFRPGMISINLDLKRGGNFRFQKTAAYGHFGRDDPDFSWETVKQLKPEK 390          

HSP 2 Score: 57.3806 bits (137), Expect = 6.081e-49
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK3_VITVI (S-adenosylmethionine synthetase 3 OS=Vitis vinifera GN=METK3 PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.347e-48
Identity = 72/86 (83.72%), Postives = 79/86 (91.86%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            C+VQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++KE+FDFRPGM+ INLDLKRGGN RF KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  302 CLVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILDLIKENFDFRPGMIAINLDLKRGGNFRFQKTAAYGHFGRDDPDFTWETVKLLK 387          

HSP 2 Score: 57.3806 bits (137), Expect = 1.347e-48
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.064e-48
Identity = 70/86 (81.40%), Postives = 79/86 (91.86%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            CIVQVSYAIGVPEPLSVFVD+Y TGKIPD++IL+++KE+FDFRPGM+ INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  302 CIVQVSYAIGVPEPLSVFVDTYKTGKIPDRDILELIKENFDFRPGMIAINLDLMRGGNSRYQKTAAYGHFGRDDPDFTWETVKLLK 387          

HSP 2 Score: 57.3806 bits (137), Expect = 5.064e-48
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 9.334e-47
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            CIVQVSYAIGVPEPLSVFVD+Y TGKIPDK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAAYGHFGRDD D TWE VK LK
Sbjct:  302 CIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAAYGHFGRDDADLTWETVKILK 387          

HSP 2 Score: 56.9954 bits (136), Expect = 9.334e-47
Identity = 26/29 (89.66%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAY+VRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYVVRQAAKSVVASG 297          
The following BLAST results are available for this feature:
BLAST of CK740285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_HORVU8.760e-5183.70S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK_MESCR2.529e-5085.71S-adenosylmethionine synthetase OS=Mesembryanthemu... [more]
METK2_DIACA5.599e-5083.70S-adenosylmethionine synthetase 2 OS=Dianthus cary... [more]
METK4_BRAJU7.300e-5086.05S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK3_ARATH9.515e-5087.21S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK1_PICSI2.746e-4982.42S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK1_VITVI6.081e-4982.02S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK3_VITVI1.347e-4883.72S-adenosylmethionine synthetase 3 OS=Vitis vinifer... [more]
METK4_POPTR5.064e-4881.40S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK2_ACTCH9.334e-4781.40S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6428 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740285 ID=CK740285; Name=CK740285; organism=Citrus sinensis; type=EST; length=563bp
GTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTGGTGCATAC
ATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCCTTGCTCGCA
GGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCT
GTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGATCCT
CAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCA
ATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCC
TATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAAGTTGTGAA
GCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAA
AACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGATGAATAATT
TGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATCTCCTGTGTT
CAGAACTCATACATGTTCCCCCATTCAATTCCTTTCTTTTTCTTCTTTCC
CACTTCTTTTTTG
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