CK740285

Overview
NameCK740285
Unique NameCK740285
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:1050..1610. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.217e-46
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            CIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  302 CIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNYRYQKTAAYGHFGRDDPDFTWETVKVLK 387          

HSP 2 Score: 57.3806 bits (137), Expect = 1.217e-46
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.217e-46
Identity = 70/86 (81.40%), Postives = 77/86 (89.53%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            CIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  302 CIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILVLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVLK 387          

HSP 2 Score: 57.3806 bits (137), Expect = 1.217e-46
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.066e-46
Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 378
            CIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  302 CIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390          

HSP 2 Score: 57.3806 bits (137), Expect = 2.066e-46
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.693e-46
Identity = 69/86 (80.23%), Postives = 77/86 (89.53%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            CIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDF+WE VK LK
Sbjct:  302 CIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFSWETVKVLK 387          

HSP 2 Score: 57.3806 bits (137), Expect = 2.693e-46
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 2.693e-46
Identity = 69/86 (80.23%), Postives = 77/86 (89.53%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            C+VQVSYAIGV EPLSVFVD+Y TGKI DK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK LK
Sbjct:  302 CLVQVSYAIGVAEPLSVFVDTYKTGKIADKDILALIKENFDFRPGMIAINLDLKRGGNLRYQKTAAYGHFGRDDPDFTWETVKILK 387          

HSP 2 Score: 57.3806 bits (137), Expect = 2.693e-46
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.720e-45
Identity = 70/92 (76.09%), Postives = 78/92 (84.78%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 378
            CIVQVSYAIGV EPLSVFVD+Y TG IP K++L ++KE+FDFRPGMM+INLDL RGGN R+ KTAAYGHFGRDDPDFTWE VK L    PQA
Sbjct:  302 CIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENFDFRPGMMSINLDLLRGGNFRYQKTAAYGHFGRDDPDFTWETVKVL---NPQA 390          

HSP 2 Score: 57.3806 bits (137), Expect = 1.720e-45
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.920e-45
Identity = 67/86 (77.91%), Postives = 76/86 (88.37%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            C+VQVSYAIGV EPLSVFVD++ TGKIPDK+IL ++KE+FDFRPGM+ INLDLKRGGN R+ KTAA GH GRDDPDFTWE VK LK
Sbjct:  302 CLVQVSYAIGVAEPLSVFVDTFKTGKIPDKDILALIKENFDFRPGMIAINLDLKRGGNFRYQKTAALGHLGRDDPDFTWETVKILK 387          

HSP 2 Score: 57.3806 bits (137), Expect = 2.920e-45
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA+G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVASG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.431e-44
Identity = 67/86 (77.91%), Postives = 75/86 (87.21%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            CIVQVSYAIGV EPLSVFVD+Y TG IPDK+IL ++KE+FDFRPGM+ INLDL RGGN R+ KTAAYGHFGRD+ DFTWE VK LK
Sbjct:  302 CIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENFDFRPGMIAINLDLLRGGNFRYQKTAAYGHFGRDEADFTWETVKALK 387          

HSP 2 Score: 56.225 bits (134), Expect = 1.431e-44
Identity = 27/29 (93.10%), Postives = 28/29 (96.55%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYIVRQAAKS+VA G
Sbjct:  269 AFSGKDPTKVDRSGAYIVRQAAKSVVAAG 297          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_CHLRE (S-adenosylmethionine synthetase OS=Chlamydomonas reinhardtii GN=METM PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.550e-43
Identity = 63/86 (73.26%), Postives = 75/86 (87.21%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK 360
            C+VQVSY+I V EPLSVFVD+YGTG +PD EILK++++ FDFRPG++  NLDLKRGGN R+ KTAAYGHFGRDDPDFTWE VK L+
Sbjct:  305 CLVQVSYSIAVAEPLSVFVDTYGTGTMPDAEILKLIRKHFDFRPGLIGKNLDLKRGGNKRYQKTAAYGHFGRDDPDFTWETVKKLE 390          

HSP 2 Score: 55.8398 bits (133), Expect = 1.550e-43
Identity = 26/29 (89.66%), Postives = 28/29 (96.55%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYI RQAAKS+VA+G
Sbjct:  272 AFSGKDPTKVDRSGAYIARQAAKSVVASG 300          
BLAST of CK740285 vs. ExPASy Swiss-Prot
Match: METK_OSTLU (S-adenosylmethionine synthetase OS=Ostreococcus lucimarinus (strain CCE9901) GN=METK-1 PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 6.635e-38
Identity = 62/87 (71.26%), Postives = 68/87 (78.16%), Query Frame = 1
Query:  103 CIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD--PDFTWEVVKPL 357
            C+ Q+SYAIGV EPLSV VD+YGTGKIPD EIL  VK +FDFRPGMM   LDLKRGGN R+  TAAYGHFGRD+    FTWE V PL
Sbjct:  301 CLFQISYAIGVAEPLSVHVDTYGTGKIPDSEILAKVKAAFDFRPGMMGKALDLKRGGNKRYQTTAAYGHFGRDEDLDIFTWEKVVPL 387          

HSP 2 Score: 53.9138 bits (128), Expect = 6.635e-38
Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 3
Query:    3 AFSGKDPTKVDRSGAYIVRQAAKSIVANG 89
            AFSGKDPTKVDRSGAYI RQAAKS+VA G
Sbjct:  268 AFSGKDPTKVDRSGAYISRQAAKSVVAAG 296          
The following BLAST results are available for this feature:
BLAST of CK740285 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK3_SOLLC1.217e-4681.40S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK2_SOLTU1.217e-4681.40S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK1_PETHY2.066e-4678.26S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK1_TOBAC2.693e-4680.23S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_ACTCH2.693e-4680.23S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK2_PETHY1.720e-4576.09S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK3_CATRO2.920e-4577.91S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_TOBAC1.431e-4477.91S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK_CHLRE1.550e-4373.26S-adenosylmethionine synthetase OS=Chlamydomonas r... [more]
METK_OSTLU6.635e-3871.26S-adenosylmethionine synthetase OS=Ostreococcus lu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6428 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740285 ID=CK740285; Name=CK740285; organism=Citrus sinensis; type=EST; length=563bp
GTGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTGGTGCATAC
ATTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCCTTGCTCGCA
GGTGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCT
GTTTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGATCCT
CAAAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCA
ATTTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCC
TATGGACACTTTGGCAGGGATGACCCAGACTTCACTTGGGAAGTTGTGAA
GCCCCTCAAGTGGGAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAA
AACTATCCCTGCTGTTCAAGTTTGCTTCTATTGGTAGTGGATGAATAATT
TGAATATTATCTTGCTGCTGCTTTGTAATACTAAGCAAATCTCCTGTGTT
CAGAACTCATACATGTTCCCCCATTCAATTCCTTTCTTTTTCTTCTTTCC
CACTTCTTTTTTG
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