CK740295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXPA1_ORYSJ (Expansin-A1 OS=Oryza sativa subsp. japonica GN=EXPA1 PE=2 SV=2) HSP 1 Score: 186.422 bits (472), Expect = 8.106e-47 Identity = 81/126 (64.29%), Postives = 104/126 (82.54%), Query Frame = 2 Query: 2 QHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 379 QHFD+++P + I Y G+VPV Y+RVPC ++GG+RFTING YF LVL++NVGG G + +VSIKGSRTGW MSRNWG NWQSN YL+GQSLSF+VT+SDG+T+T +VAPAGW+FG+T+S +Q Sbjct: 133 QHFDMAEPAWLKIGVYVGGIVPVMYQRVPCAKQGGVRFTINGRDYFELVLVSNVGGVGSIQSVSIKGSRTGWMAMSRNWGVNWQSNAYLDGQSLSFKVTSSDGQTLTFLDVAPAGWTFGQTFSTSQ 258
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 1.383e-46 Identity = 88/128 (68.75%), Postives = 101/128 (78.91%), Query Frame = 2 Query: 2 QHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQF 382 +HFD+SQP ++ IA YRAG+VPV YRRVPC R GGIRF +NGHSYF LVL+TNVGG+G V + IKGS TGW MSRNWG NWQSN L+GQ+LSF V DGR VT+ +VAPAGWSFG TY S AQF Sbjct: 123 RHFDMSQPAWETIAVYRAGIVPVNYRRVPCQRSGGIRFAVNGHSYFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFRVQADDGRVVTAADVAPAGWSFGATYTSSAQF 250
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 1.997e-45 Identity = 83/123 (67.48%), Postives = 97/123 (78.86%), Query Frame = 2 Query: 2 QHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 370 QHFD+SQP +++IA Y+AG+VPV Y+RVPC R GGIRF I+GH YF LV +TNVGG+G V +SIKGS TGW MSRNWG NWQSN YL GQSLSF V DGR VT++NVAP+ W FG TYS Sbjct: 127 QHFDMSQPAWENIAVYQAGIVPVNYKRVPCQRSGGIRFAISGHDYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAGQSLSFIVQLDDGRKVTAWNVAPSNWFFGATYS 249
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 5.437e-43 Identity = 76/128 (59.38%), Postives = 101/128 (78.91%), Query Frame = 2 Query: 2 QHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQF 382 QHFD++QP ++ I YR G+VPV ++RV C R+GG+RFTING+SYF LVLITNVGG G + +V IKG++TGW MSRNWG NWQ+N YLN Q++SF VT++ G+T+ +VAP+ W FG+T+ SG QF Sbjct: 122 QHFDMAQPAWEQIGVYRGGIVPVNFQRVSCTRKGGVRFTINGNSYFELVLITNVGGPGSIKSVQIKGTKTGWVTMSRNWGANWQANNYLNNQAISFSVTSTAGKTLVFEDVAPSNWQFGQTFTSGVQF 249
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 4.603e-42 Identity = 77/123 (62.60%), Postives = 95/123 (77.24%), Query Frame = 2 Query: 2 QHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 370 +HFD+SQP + IA Y+AG+VPV ++RVPC + GGIRFTI+G YF LV + NVGG+G V VSIKGS+T W MSRNWGQNWQSN YLN QSLSF+V D R VT +N+AP+ W+FG TY+ Sbjct: 121 KHFDMSQPAWTSIAIYQAGIVPVNFKRVPCQKSGGIRFTISGRDYFELVTVFNVGGSGVVAQVSIKGSKTDWMAMSRNWGQNWQSNAYLNTQSLSFKVKLDDAREVTVWNIAPSNWNFGTTYT 243
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.025e-41 Identity = 74/123 (60.16%), Postives = 94/123 (76.42%), Query Frame = 2 Query: 2 QHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 370 +HFD++QP ++ I YR G+VPV ++RV C ++GG+RF ING YF LV I NVGGAG + +VSIKGS+TGW MSRNWG NWQSN YL+GQ+LSF +TT+DG T NV P+ WSFG+ YS Sbjct: 125 KHFDMAQPAWEKIGIYRGGIVPVVFQRVSCYKKGGVRFRINGRDYFELVNIQNVGGAGSIKSVSIKGSKTGWLAMSRNWGANWQSNAYLDGQALSFSITTTDGATRVFLNVVPSSWSFGQIYS 247
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXPA9_ORYSJ (Expansin-A9 OS=Oryza sativa subsp. japonica GN=EXPA9 PE=2 SV=2) HSP 1 Score: 165.236 bits (417), Expect = 1.934e-40 Identity = 75/122 (61.48%), Postives = 89/122 (72.95%), Query Frame = 2 Query: 2 QHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY 367 +HFD+SQP ++ IA Y +G+VPV Y R PC R GGIRF I GH Y+ LVL+TNV G+G V A +KGS T W MSRNWG+NWQSN YL GQ+LSF V DG VT+Y+VAPA W FG TY Sbjct: 125 RHFDMSQPAWEAIAVYSSGIVPVRYARTPCRRVGGIRFGIAGHDYYELVLVTNVAGSGAVAAAWVKGSGTEWLSMSRNWGENWQSNAYLTGQALSFRVQADDGGVVTAYDVAPANWQFGSTY 246
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 9.597e-40 Identity = 71/127 (55.91%), Postives = 91/127 (71.65%), Query Frame = 2 Query: 5 HFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR--TGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYSGAQ 379 HFD++QP ++ I YR G+VPVA+RRVPC RRGG+RFT+ G YF LVL+TNV AG V ++ ++GSR GW MSRNWG NWQS YL+GQ LSF VT +DG+T+ V P W FG+T++ Q Sbjct: 134 HFDMAQPAWERIGVYRGGIVPVAFRRVPCRRRGGVRFTVAGRDYFELVLVTNVAAAGSVRSMEVRGSRRGAGWMAMSRNWGANWQSLAYLDGQGLSFRVTATDGQTIVFAGVVPPSWRFGQTFASTQ 260
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXP24_ORYSJ (Expansin-A24 OS=Oryza sativa subsp. japonica GN=EXPA24 PE=2 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 1.637e-39 Identity = 72/129 (55.81%), Postives = 94/129 (72.87%), Query Frame = 2 Query: 5 HFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSR-TGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTY-SGAQFR 385 HFD++QP ++ I YRAG++PV Y+RVPC ++GG+RFTINGH YFNLVL+TNV G + ++ I GS T W PM RNWG NW S +YL GQ LSF VT DG+T+ N+ P+GW FG+T+ S QF+ Sbjct: 150 HFDMAQPAWEKIGIYRAGIIPVMYQRVPCVKKGGVRFTINGHDYFNLVLVTNVATTGSIKSMDIMGSNSTDWMPMVRNWGANWHSLSYLTGQMLSFRVTNMDGQTLVFRNIVPSGWKFGQTFASKLQFK 278
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 161.384 bits (407), Expect = 2.792e-39 Identity = 73/123 (59.35%), Postives = 92/123 (74.80%), Query Frame = 2 Query: 2 QHFDLSQPVFQHIAQYRAGVVPVAYRRVPCGRRGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSLSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 370 +HFD+SQP ++ I YRAG+VPV YRRV C RRGG+RFT+ G +F LVL+ NV G+G V AVS++G+ TGW MSRNWG NWQS L GQ LSF VTT+ G+ + +VAPAGW FG+T+S Sbjct: 126 RHFDMSQPAWERIGVYRAGIVPVLYRRVRCWRRGGVRFTVGGFDHFELVLVANVAGSGSVAAVSVRGAGTGWLQMSRNWGANWQSLAGLAGQPLSFGVTTTGGQYILFQDVAPAGWKFGQTFS 248 The following BLAST results are available for this feature:
BLAST of CK740295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740295 ID=CK740295; Name=CK740295; organism=Citrus sinensis; type=EST; length=564bpback to top |