CK740295
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13 Identity = 48/141 (34.04%), Postives = 68/141 (48.23%), Query Frame = 2 Query: 5 HFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRG---GIRFTINGHSYFNLVLITNVGGAGDVHAVSI-----KGSRTGWQPMSRNWGQNWQSNTYLNGQS-----LSFEVTTSDGRTVTSYNVAPAGWSFGRTY 367 HFDLS F +A+ AG +PV Y RVPC +G R + Y+ VL+ + G GD+ AV + G W M ++WG W+ N+ G + +S +T+ GRT+ + NV PAGW G TY Sbjct: 126 HFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS---GPAPLQAPMSIRLTSGSGRTLVASNVIPAGWQPGGTY 263
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXB11_ORYSJ (Expansin-B11 OS=Oryza sativa subsp. japonica GN=EXPB11 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.000e-12 Identity = 47/135 (34.81%), Postives = 71/135 (52.59%), Query Frame = 2 Query: 5 HFDLSQPVFQHIAQ-------YRAGVVPVAYRRVPCGRRG-GIRFTIN--GHSYFNLVLITNVGGAGDVHAVSIKGSRTGWQPMSRNWGQNWQSNTYLNGQSL----SFEVTTSDGRTVTSYNVAPAGWSFGRTY 367 HFD+S +A+ AG++ V YRRVPC G I F ++ + ++ VLI G GD++AV + + GW PM +NWG W+ N+ G++L S +T+ G+ + + NV PA W G TY Sbjct: 152 HFDMSGTSMGAMAKPGMADKLRAAGILQVQYRRVPCKYSGVNIAFRVDQGANPFYFEVLIEFEDGDGDLNAVDLMEAGCGWTPMVQNWGALWRYNSN-TGKALKAPFSLRLTSDSGKVLVANNVIPASWKPGVTY 285
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXB18_ORYSJ (Expansin-B18 OS=Oryza sativa subsp. japonica GN=EXPB18 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12 Identity = 49/137 (35.77%), Postives = 72/137 (52.55%), Query Frame = 2 Query: 5 HFDLSQPVFQHIA------QYRA-GVVPVAYRRVPCGRRGGIRFTI-----NGHSYFNLVLITNVGGAGDVHAVSIK--GSRTGWQPMSRNWGQNWQSNTYLNGQS-LSFEVTTSDGRTVTSYNVAPAGWSFGRTYS 370 HFDLS F +A Q RA GV+ + Y RVPC GG+ T + SYF VL+ G GD+ + + G+ W PM ++WG W+ + Q+ LS +T+S G+T+ + NV P+GW G +Y+ Sbjct: 125 HFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVMLTFAVDAGSNPSYF-AVLVKYENGDGDLSGMDLMQTGAGAAWTPMQQSWGAVWKLSAGAALQAPLSIRLTSSSGKTLVASNVIPSGWKPGASYT 259
BLAST of CK740295 vs. ExPASy Swiss-Prot
Match: EXB15_ORYSJ (Expansin-B15 OS=Oryza sativa subsp. japonica GN=EXPB15 PE=3 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 8.466e-12 Identity = 46/135 (34.07%), Postives = 69/135 (51.11%), Query Frame = 2 Query: 5 HFDLSQPVFQHIA------QYRA-GVVPVAYRRVPCGRRGGIRFT----INGHSYFNLVLITNVGGAGDVHAVSIK--GSRTGWQPMSRNWGQNWQSNTYLNGQS-LSFEVTTSDGRTVTSYNVAPAGWSFGRTY 367 HFDLS F +A Q RA GV+ + Y RVPC GG++ T + + + VL+ G GD+ V + G+ W M ++WG W+ N Q+ S +T+S G+T+ + NV P+GW G +Y Sbjct: 125 HFDLSGTAFGAMANPGQADQLRAAGVLQIQYNRVPCNW-GGVKLTFVVDVGSNPNYFAVLVKYENGDGDLSGVELMQTGAGAAWTQMQQSWGAVWKLNAGSALQAPFSIRLTSSSGKTLVASNVIPSGWKPGMSY 258 The following BLAST results are available for this feature:
BLAST of CK740295 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740295 ID=CK740295; Name=CK740295; organism=Citrus sinensis; type=EST; length=564bpback to top |