CK740303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX17_ORYSI (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica GN=HOX17 PE=2 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.384e-40 Identity = 85/117 (72.65%), Postives = 92/117 (78.63%), Query Frame = 2 Query: 152 TRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQP-FYMQL-PATTLTMCPSCERV 496 +RKKLRLSK+QSA LE+SF+EH T RPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCETLTEENRRLQKE+QELRALK P YM + P TTLTMCPSCERV Sbjct: 80 SRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCERV 196
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HAT4_ARATH (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana GN=HAT4 PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 3.384e-40 Identity = 94/165 (56.97%), Postives = 107/165 (64.85%), Query Frame = 2 Query: 5 LSSPNSTVSSFQMDHFCIRNGRSKRDLFDVEISHXXXXXXXXXXXXNGLTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERV 496 +SSPNSTVSS RS+R+ E + +RKKLRLSK+QSA LEE+FK+H+T R RQVEVWFQNRRARTKLKQTEVDCE+L+RCCE LTEENRRLQKE+ ELRALK S FYM + P TTLTMCPSCE V Sbjct: 89 VSSPNSTVSSST-------GKRSERE----EDTDPQGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLKQTEVDCEFLRRCCENLTEENRRLQKEVTELRALKLSPQFYMHMSPPTTLTMCPSCEHV 242
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HAT3_ARATH (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana GN=HAT3 PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 5.773e-40 Identity = 98/183 (53.55%), Postives = 111/183 (60.66%), Query Frame = 2 Query: 5 LSSPNSTVSSFQMDHFCIRNGRSKRDLF------------DVEISHXXXXXXXXXXXXNGL------TRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERV 496 +SSPNSTVSS + +S+R+L D EI +G +RKKLRLSKEQ+ LEE+FKEH+T R RQVEVWFQNRRARTKLKQTEVDCEYLKRCCE LT+ENRRLQKE+ ELRALK S YM + P TTLTMCPSCERV Sbjct: 99 VSSPNSTVSSV------MSGKKSERELMAAAGAVGGGRVEDNEIERASCSLGGGSDDEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKLSPHLYMHMKPPTTLTMCPSCERV 275
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HAT2_ARATH (Homeobox-leucine zipper protein HAT2 OS=Arabidopsis thaliana GN=HAT2 PE=2 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 4.887e-39 Identity = 97/172 (56.40%), Postives = 104/172 (60.47%), Query Frame = 2 Query: 5 LSSPNSTVSSFQMDHFCIRNG------RSKRDLFDVEISHXXXXXXXXXXXXNGLT-RKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERV 496 +SSPNST+SS R G S D ++ G T RKKLRLSK+QSAFLEE+FKEHNT RQVEVWFQNRRARTKLKQTEVDCEYLKRC E LTEENRRLQKE ELR LK S FY Q+ P TTL MCPSCERV Sbjct: 72 VSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTLIMCPSCERV 243
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: ATHB4_ARATH (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana GN=ATHB-4 PE=2 SV=1) HSP 1 Score: 160.229 bits (404), Expect = 6.382e-39 Identity = 81/116 (69.83%), Postives = 89/116 (76.72%), Query Frame = 2 Query: 152 TRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERV 496 +RKKLRLSK+Q+ LEE+FKEH+T R RQVEVWFQNRRARTKLKQTEVDCEYLKRCC+ LTEENRRLQKE+ ELRALK S YM + P TTLTMCPSCERV Sbjct: 161 SRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLSPHLYMHMTPPTTLTMCPSCERV 276
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSJ (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. japonica GN=HOX1 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 3.502e-37 Identity = 81/125 (64.80%), Postives = 92/125 (73.60%), Query Frame = 2 Query: 146 GLTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALK----TSQPFYMQ----LPATTLTMCPSCERV 496 G +RKKLRLSK+Q+A LE++FKEHNT +PRQVEVWFQNRRARTKLKQTEVDCE LKRCCETLT+ENRRL +ELQELRALK + P ++ P TTLTMCPSCERV Sbjct: 153 GGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERV 277
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX1_ORYSI (Homeobox-leucine zipper protein HOX1 OS=Oryza sativa subsp. indica GN=HOX1 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 3.502e-37 Identity = 81/125 (64.80%), Postives = 92/125 (73.60%), Query Frame = 2 Query: 146 GLTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALK----TSQPFYMQ----LPATTLTMCPSCERV 496 G +RKKLRLSK+Q+A LE++FKEHNT +PRQVEVWFQNRRARTKLKQTEVDCE LKRCCETLT+ENRRL +ELQELRALK + P ++ P TTLTMCPSCERV Sbjct: 153 GGSRKKLRLSKDQAAVLEDTFKEHNTLNPKQKAALARQLNLKPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTDENRRLHRELQELRALKLATAAAAPHHLYGARVPPPTTLTMCPSCERV 277
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.974e-37 Identity = 80/121 (66.12%), Postives = 91/121 (75.21%), Query Frame = 2 Query: 152 TRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRAL--KTSQPFYM----QLPATTLTMCPSCERV 496 +RKKLRLSKEQSA LE+ FKEH+T RPRQVEVWFQNRRARTKLKQTEVDCE LKRCCETLTEENRRL +ELQ+LRAL T+ F+M +PA TL++CPSCER+ Sbjct: 92 SRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERL 212
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSI (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. indica GN=HOX15 PE=2 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 5.974e-37 Identity = 80/121 (66.12%), Postives = 91/121 (75.21%), Query Frame = 2 Query: 152 TRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRAL--KTSQPFYM----QLPATTLTMCPSCERV 496 +RKKLRLSKEQSA LE+ FKEH+T RPRQVEVWFQNRRARTKLKQTEVDCE LKRCCETLTEENRRL +ELQ+LRAL T+ F+M +PA TL++CPSCER+ Sbjct: 92 SRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERL 212
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HAT1_ARATH (Homeobox-leucine zipper protein HAT1 OS=Arabidopsis thaliana GN=HAT1 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 7.802e-37 Identity = 94/172 (54.65%), Postives = 103/172 (59.88%), Query Frame = 2 Query: 5 LSSPNSTVSSFQMD--HFCIRNGRSKR---DLFDVEISHXXXXXXXXXXXXNG--LTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQL-PATTLTMCPSCERV 496 +SSPNST+SS R G S D D+ + G RKKLRLSK+QSA LE++FKEHNT RQVEVWFQNRRARTKLKQTEVDCEYLKRC E LTEENRRL+KE ELRALK S Y Q+ P TTL MCPSCERV Sbjct: 77 VSSPNSTISSTVSGKRRSTEREGTSGGGCGDDLDITLDRSSSRGTSDEEEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAKKLGLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLEKEAAELRALKLSPRLYGQMSPPTTLLMCPSCERV 248 The following BLAST results are available for this feature:
BLAST of CK740303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740303 ID=CK740303; Name=CK740303; organism=Citrus sinensis; type=EST; length=570bpback to top |