CK740303
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSI (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. indica GN=HOX7 PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 2.349e-33 Identity = 78/125 (62.40%), Postives = 87/125 (69.60%), Query Frame = 2 Query: 146 GLTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALKTSQPFY------MQLPA---TTLTMCPSCE 490 G RKKLRLSKEQS+FLE+SFKEH+T RPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LT ENRRLQ+E+ ELR AL+T+ Y LPA T +CPSCE Sbjct: 149 GGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGALRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCE 273
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX7_ORYSJ (Homeobox-leucine zipper protein HOX7 OS=Oryza sativa subsp. japonica GN=HOX7 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 6.835e-33 Identity = 77/125 (61.60%), Postives = 86/125 (68.80%), Query Frame = 2 Query: 146 GLTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-ALKTSQPFY------MQLPA---TTLTMCPSCE 490 G RKKLRLSKEQS+FLE+SFKEH+T RPRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE LT ENRRLQ+E+ ELR L+T+ Y LPA T +CPSCE Sbjct: 149 GGARKKLRLSKEQSSFLEDSFKEHSTLTPKQKSDLANRLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRCCERLTRENRRLQREVAELRGTLRTTTSSYPPLYGLHHLPAAAGTVFRVCPSCE 273
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSJ (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 6.835e-33 Identity = 71/119 (59.66%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 158 KKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQ------LPATTLTMCPSCERV 496 KKLRLSKEQS LEESF+ ++T RPRQVEVWFQNRRARTKLKQTE++CEYLKRC +LTEENRRLQ+E++ELRA++ + P + LPA+ LTMCP CER+ Sbjct: 78 KKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCERI 196
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX3_ORYSI (Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. indica GN=HOX3 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 6.835e-33 Identity = 71/119 (59.66%), Postives = 86/119 (72.27%), Query Frame = 2 Query: 158 KKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTSQPFYMQ------LPATTLTMCPSCERV 496 KKLRLSKEQS LEESF+ ++T RPRQVEVWFQNRRARTKLKQTE++CEYLKRC +LTEENRRLQ+E++ELRA++ + P + LPA+ LTMCP CER+ Sbjct: 78 KKLRLSKEQSRLLEESFRLNHTLTPKQKEALAIKLKLRPRQVEVWFQNRRARTKLKQTEMECEYLKRCFGSLTEENRRLQREVEELRAMRVAPPTVLSPHTRQPLPASALTMCPRCERI 196
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSJ (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. japonica GN=HOX28 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.166e-32 Identity = 75/118 (63.56%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 146 GLTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALK-TSQPFYMQLPATTLTMCPSCERV 496 G RKKLRLSK+Q+A LEE FK H+T RPRQVEVWFQNRRARTKLKQTEVDCE+LKR C+ L ++NRRL KEL ELRALK T P P TTLTMC SC+RV Sbjct: 90 GGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATPTPPAAAPPLTTLTMCLSCKRV 207
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX28_ORYSI (Homeobox-leucine zipper protein HOX28 OS=Oryza sativa subsp. indica GN=HOX28 PE=2 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.166e-32 Identity = 75/118 (63.56%), Postives = 83/118 (70.34%), Query Frame = 2 Query: 146 GLTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALK-TSQPFYMQLPATTLTMCPSCERV 496 G RKKLRLSK+Q+A LEE FK H+T RPRQVEVWFQNRRARTKLKQTEVDCE+LKR C+ L ++NRRL KEL ELRALK T P P TTLTMC SC+RV Sbjct: 90 GGARKKLRLSKDQAAVLEECFKTHHTLTPKQKVALAKSLNLRPRQVEVWFQNRRARTKLKQTEVDCEHLKRWCDQLADDNRRLHKELAELRALKATPTPPAAAPPLTTLTMCLSCKRV 207
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSJ (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. japonica GN=HOX2 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.392e-32 Identity = 75/123 (60.98%), Postives = 83/123 (67.48%), Query Frame = 2 Query: 155 RKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTS---------QPFYMQLPATTLTMCPSCERV 496 RKKLRLSK+Q+A LEE FK H+T RPRQVEVWFQNRRARTKLKQTEVDCEYLKR CE L +EN+RL+KEL +LRALK + QP A TLTMCPSC RV Sbjct: 114 RKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQP--SSSAAATLTMCPSCRRV 234
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX2_ORYSI (Homeobox-leucine zipper protein HOX2 OS=Oryza sativa subsp. indica GN=HOX2 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.392e-32 Identity = 75/123 (60.98%), Postives = 83/123 (67.48%), Query Frame = 2 Query: 155 RKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTS---------QPFYMQLPATTLTMCPSCERV 496 RKKLRLSK+Q+A LEE FK H+T RPRQVEVWFQNRRARTKLKQTEVDCEYLKR CE L +EN+RL+KEL +LRALK + QP A TLTMCPSC RV Sbjct: 114 RKKLRLSKDQAAVLEECFKTHSTLNPKQKVALANRLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRWCERLADENKRLEKELADLRALKAAPSPASASAMQP--SSSAAATLTMCPSCRRV 234
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSI (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. indica GN=HOX18 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.199e-31 Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 2 Query: 146 GLTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTS------QPFYMQLP----ATTLTMCPSCERV 496 G TRKKL+L+KEQS LE+SF+ HN +PRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE+LTEEN++L+ EL ELR L ++ Y+Q P A + +CPSCE+V Sbjct: 111 GGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASAAAAAAGSQLYVQFPRAAAAAMVNVCPSCEKV 237
BLAST of CK740303 vs. ExPASy Swiss-Prot
Match: HOX18_ORYSJ (Homeobox-leucine zipper protein HOX18 OS=Oryza sativa subsp. japonica GN=HOX18 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.872e-31 Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 2 Query: 146 GLTRKKLRLSKEQSAFLEESFKEHNTXXXXXXXXXXXXXXXRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKT------SQPFYMQLP----ATTLTMCPSCERV 496 G TRKKL+L+KEQS LE+SF+ HN +PRQVEVWFQNRRARTKLKQTEVDCE+LKRCCE+LTEEN++L+ EL ELR L + Y+Q P A + +CPSCE+V Sbjct: 111 GGTRKKLQLTKEQSTLLEDSFRVHNILSHAQKHELARQLKLKPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCESLTEENKQLKHELMELRRLASPAAAAAGSQLYVQFPRAAAAAMVNVCPSCEKV 237 The following BLAST results are available for this feature:
BLAST of CK740303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740303 ID=CK740303; Name=CK740303; organism=Citrus sinensis; type=EST; length=570bpback to top |