CK740311
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 282.722 bits (722), Expect = 4.424e-88 Identity = 135/151 (89.40%), Postives = 141/151 (93.38%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWI 546 REAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGALRARVYDDEVR ++ Sbjct: 211 REAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFV 361 HSP 2 Score: 63.1586 bits (152), Expect = 4.424e-88 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 181 KMGINPIMMSAGELESGNAGEPAKLIRQRY 210
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 269.24 bits (687), Expect = 1.076e-83 Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REAAD+I KGKMC L INDL+ GAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK++N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIF+ D V + +VKLVD FPGQSIDFFGALRARVY DEVR W++ Sbjct: 209 REAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVN 360 HSP 2 Score: 62.003 bits (149), Expect = 1.076e-83 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 K+GINPIMMSAGELESGNAGEPAKLIRQRY Sbjct: 179 KLGINPIMMSAGELESGNAGEPAKLIRQRY 208
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.287e-78 Identity = 124/152 (81.58%), Postives = 134/152 (88.16%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REA+DII+KG+MC L INDLDAGAGRMG TTQYTVNNQMVNATLMNIADNPT VQLPG+Y EE PRVPI+ TGNDFSTLYAPLIRDGRMEK+YW PTREDRIGVC GIF+ DNV ++ LVDTFPGQSIDFFGALRARVYDD VR WI+ Sbjct: 184 REASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWIT 335 HSP 2 Score: 55.0694 bits (131), Expect = 1.287e-78 Identity = 26/30 (86.67%), Postives = 28/30 (93.33%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 K+GI PI+MSAGELESGNAGEPAKLIR RY Sbjct: 154 KLGIAPIVMSAGELESGNAGEPAKLIRTRY 183
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 287.73 bits (735), Expect = 2.449e-77 Identity = 134/151 (88.74%), Postives = 144/151 (95.36%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWI 546 REAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNK ENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRARVYDDEVR W+ Sbjct: 201 REAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWV 351
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 285.419 bits (729), Expect = 1.216e-76 Identity = 135/152 (88.82%), Postives = 144/152 (94.74%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REA+D+I+KGKM CL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V ++ +V+LVDTFPGQSIDFFGALRARVYDDEVR W+S Sbjct: 207 REASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVS 358
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 1.138e-74 Identity = 134/152 (88.16%), Postives = 141/152 (92.76%), Query Frame = 1 Query: 94 REAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWIS 549 REA+D+I+KGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+N RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D V + DIV+LVD PGQSIDFFGALRARVYDDEVR WIS Sbjct: 215 REASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWIS 366
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 3.323e-61 Identity = 103/152 (67.76%), Postives = 125/152 (82.24%), Query Frame = 1 Query: 94 REAADIIR-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWI 546 RE A++I+ +GKMC LMINDLDAGAGR TQYTVN Q+VNATLMNIADNPT VQLPG Y+ RVPIIVTGNDFSTLYAPLIRDGRMEKFYW P R++++G+ GIF D ++ D+ KLVD+FP QSIDFF ALR+R+YD+++R++I Sbjct: 83 RETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFI 234 HSP 2 Score: 40.817 bits (94), Expect = 3.323e-61 Identity = 18/30 (60.00%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMG+ ++S GELES +AG+PA+LIR RY Sbjct: 53 KMGVEVTLISGGELESPDAGDPARLIRLRY 82
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 5.649e-61 Identity = 104/152 (68.42%), Postives = 124/152 (81.58%), Query Frame = 1 Query: 94 REAADIIR-KGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWI 546 RE A++I+ +GKMC LMINDLDAGAGR TQYTVN Q+VNATLMNIADNPT VQLPG Y+ RVPIIVTGNDFSTLYAPLIRDGRMEKFYW P R+D++G+ GIF D ++ +I +LVDTFP QSIDFF ALR+R+YD ++R++I Sbjct: 83 RETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFI 234 HSP 2 Score: 41.2022 bits (95), Expect = 5.649e-61 Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 3 KMGINPIMMSAGELESGNAGEPAKLIRQRY 92 KMGI ++S GELES +AG+PA+LIR RY Sbjct: 53 KMGIEVTLISGGELESPDAGDPARLIRLRY 82
BLAST of CK740311 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.181e-17 Identity = 66/156 (42.31%), Postives = 69/156 (44.23%), Query Frame = 1 Query: 43 WKVAMLENPLS*SGRGTREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALR 510 W M NP+ S G E+ + KMCCL INDLDAGAGR VPIIVTGNDFSTLYAPLI RIGVC GIFR LVDTFPGQSIDFFGALR Sbjct: 54 WGGKMGINPIMMSA-GELESGNAGEPAKMCCLFINDLDAGAGR-----------------------------------------VPIIVTGNDFSTLYAPLI----------------RIGVCTGIFR-----------LVDTFPGQSIDFFGALR 140 The following BLAST results are available for this feature:
BLAST of CK740311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740311 ID=CK740311; Name=CK740311; organism=Citrus sinensis; type=EST; length=550bpback to top |