CK740326
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC13_SCHPO (Ubiquitin-conjugating enzyme E2 13 OS=Schizosaccharomyces pombe GN=ubc13 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.319e-15 Identity = 35/91 (38.46%), Postives = 57/91 (62.64%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVRE 357 F L L ++YP PP VRF+++++HPN+ G ICL L+ WSP + +L SIQ+L+ PNP+ P +++ A+++ EN+ + RE Sbjct: 51 FHLELFLPDEYPMMPPNVRFLTKIYHPNVDKLGRICLSTLKKDWSPALQIRTVLLSIQALMGAPNPDDPLDNDVAKIWKENEPQAIANARE 141 HSP 2 Score: 20.4014 bits (41), Expect = 1.319e-15 Identity = 6/25 (24.00%), Postives = 15/25 (60.00%), Query Frame = 3 Query: 6 APQDNSIMLWNAVIFGPDDTPWDGG 80 AP ++++ + + GP + ++GG Sbjct: 25 APTEDNLRYFKITMEGPQQSAYEGG 49
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSI (Ubiquitin-conjugating enzyme E2 S OS=Drosophila simulans GN=GD17343 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.330e-15 Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 61 TPHGMEVPFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVE 366 TP+ + F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y +R R + E Sbjct: 56 TPYAAGI-FRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBE2S_DROSE (Ubiquitin-conjugating enzyme E2 S OS=Drosophila sechellia GN=GM13299 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.330e-15 Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 61 TPHGMEVPFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVE 366 TP+ + F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y +R R + E Sbjct: 56 TPYAAGI-FRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBE2S_DROME (Ubiquitin-conjugating enzyme E2 S OS=Drosophila melanogaster GN=CG8188 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.330e-15 Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 1 Query: 61 TPHGMEVPFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVE 366 TP+ + F++ L +D+P PP F++++FHPN+ A+G IC++ L+ W P + IL +I+ LL PNP S N EA +M E +Y +R R + E Sbjct: 56 TPYAAGI-FRVKLTLNKDFPLTPPKAYFLTKIFHPNVAANGEICVNTLKKDWKPDLGIKHILLTIKCLLIVPNPESALNEEAGKMLLERYDDYSQRARMMTE 156
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC4_WHEAT (Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum GN=UBC4 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.330e-15 Identity = 36/97 (37.11%), Postives = 60/97 (61.86%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQ 369 +K+ ++ TE YP K P++ F ++++HPN+ GS+CLD++ WSP++D+ I + LL PNP+ P N EAA + +K Y +V+E E+ Sbjct: 49 WKVRVELTEAYPYKSPSIGFTNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLLYPNPSDPLNGEAASLMMRDKNAYENKVKEYCER 145
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC12_CANGA (NEDD8-conjugating enzyme UBC12 OS=Candida glabrata GN=UBC12 PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.330e-15 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVR 354 F+ T F E YP PP V +++FHPNI G ICL+IL+ WSP D+ I+ + SL +PN N P N EAA + +++K E+ VR Sbjct: 81 FRFTATFLETYPIDPPKVICNNKIFHPNIDPHGKICLNILREDWSPALDLQCIVLGLLSLFQEPNGNDPLNKEAAEVLNKDKLEFGNLVR 170
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBE2T_MOUSE (Ubiquitin-conjugating enzyme E2 T OS=Mus musculus GN=Ube2t PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.738e-15 Identity = 42/112 (37.50%), Postives = 66/112 (58.93%), Query Frame = 1 Query: 43 LYSGRMTPHGMEVPFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL----QNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVE 366 + G TP+ V F L + E YP +PP VRF++ ++HPNI + G ICLDIL + W P ++A +LTSIQ L+ +PNP+ P ++ + F NK + ++ ++ E Sbjct: 38 ILGGANTPYEKGV-FTLEVIIPERYPFEPPQVRFLTPIYHPNIDSSGRICLDILKLPPKGAWRPSLNIATVLTSIQLLMAEPNPDDPLMADISSEFKYNKIAFLKKAKQWTE 148
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC5_ARATH (Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.738e-15 Identity = 35/97 (36.08%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQ 369 +K+ ++ + YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PNP+ P N EAA + ++ Y +RV+E E+ Sbjct: 49 WKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEK 145
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBC4_ARATH (Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.738e-15 Identity = 35/97 (36.08%), Postives = 62/97 (63.92%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNI-YADGSICLDILQNQWSPIYDVAAIL-TSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVEQ 369 +K+ ++ + YP K P+V F+++++HPN+ GS+CLD++ WSP++D+ + T + LL PNP+ P N EAA + ++ Y +RV+E E+ Sbjct: 49 WKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVKEYCEK 145
BLAST of CK740326 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.192e-15 Identity = 35/94 (37.23%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 85 FKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYHRRVREIVE 366 F++ L +D+P PP F++++FHPN+ +G IC+++L+ W+ + +L +I+ LL PNP S N EA R+ EN EY R R + E Sbjct: 60 FRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153 HSP 2 Score: 21.1718 bits (43), Expect = 2.192e-15 Identity = 8/24 (33.33%), Postives = 12/24 (50.00%), Query Frame = 3 Query: 9 PQDNSIMLWNAVIFGPDDTPWDGG 80 P + + I GP+ TP+ GG Sbjct: 35 PNEEDLTDLQVTIEGPEGTPYAGG 58 The following BLAST results are available for this feature:
BLAST of CK740326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 225
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK740326 ID=CK740326; Name=CK740326; organism=Citrus sinensis; type=EST; length=463bpback to top |