CK740329

Overview
NameCK740329
Unique NameCK740329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:466..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 8.758e-23
Identity = 64/172 (37.21%), Postives = 97/172 (56.40%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            LP   DWR+K  V PVK+Q  CGSCW+FST   +E    +   K ++LSEQ LV+CD         + ++GC GGLM+ A E  L+ GG++  E+ PY G D    CK    +++ S +   V+  +E+++   LV NGP++VAI+   +  Y  G++     +  L+H VL
Sbjct:  124 LPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD---------NINNGCAGGLMHWALESILQEGGVVSAENEPYYGFD--GVCKKSPFELSISGSRRYVLQ-NENKLRELLVVNGPISVAIDVSDLINYKAGIADICENNEGLNHAVL 283          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.144e-22
Identity = 60/172 (34.88%), Postives = 88/172 (51.16%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGV 515
            P   DWREKGAV PVK+Q  CGSCW+FST   +EG N + TG+L+SLSEQ+L+DC++            GC+GG    + +Y +   G+  E +YPY    +G     DK      +  +  V  +++      + N P++V  ++     Q Y GG+     C    DH V
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR---------SHGCDGGYQTPSLQYVVD-NGVHTEREYPYE-KKQGRCRAKDKKGPKVYITGYKYVPANDEISLIQAIANQPVSVVTDSRGRGFQFYKGGI-YEGPCGTNTDHAV 161          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.144e-22
Identity = 61/176 (34.66%), Postives = 93/176 (52.84%), Query Frame = 3
Query:    3 LPADFDWRE-KGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICS-RRLDHGVL 518
            +P   DWR+ K  +  VK+QGSC  CW+ +    ++    +   + V +S Q+L+DC+          C +GCNGG +  A+   L   GL  E+DYP+ G  + H C   K K  A + +F+++S +E  IA  L  +GP+ V IN   +Q Y  GV  + P  C  R++DH VL
Sbjct:  126 VPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCER---------CGNGCNGGFVWDAYLTVLNNSGLASEKDYPFQGDRKPHRCLAKKYKKVAWIQDFTMLSNNEQAIAHYLAVHGPITVTINMKLLQHYQKGVIKATPSSCDPRQVDHSVL 292          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATW_HUMAN (Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2)

HSP 1 Score: 105.145 bits (261), Expect = 1.951e-22
Identity = 62/176 (35.23%), Postives = 90/176 (51.14%), Query Frame = 3
Query:    3 LPADFDWRE-KGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRL-DHGVL 518
            +P   DWR+   A+ P+KDQ +C  CW+ +  G +E    ++    V +S Q+L+DC         G C  GC+GG +  AF   L   GL  E+DYP+ G  R H C   K +  A + +F ++  +E +IA  L   GP+ V IN   +Q Y  GV  + P  C  +L DH VL
Sbjct:  128 VPFSCDWRKVASAISPIKDQKNCNCCWAMAAAGNIETLWRISFWDFVDVSVQELLDC---------GRCGDGCHGGFVWDAFITVLNNSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTINMKPLQLYRKGVIKATPTTCDPQLVDHSVL 294          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATM_MOUSE (Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.328e-22
Identity = 55/147 (37.41%), Postives = 80/147 (54.42%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 443
            LP   +W+++G V PV+ QG C SCW+FS TGA+EG  F  TG+L+ LS Q LVDC            + GC  G    A  Y ++ GGL  E  YPY   ++  +C++      A++  F  V  +ED +   +   GP++VAI+A
Sbjct:  114 LPKFINWKKRGYVTPVQTQGRCNSCWAFSVTGAIEGQMFRKTGQLIPLSVQNLVDCSRP-------QGNWGCYLGNTYLALHYVMENGGLESEATYPY--EEKDGSCRYSPENSTANITGFEFVPKNEDALMNAVASIGPISVAIDA 251          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.328e-22
Identity = 65/175 (37.14%), Postives = 94/175 (53.71%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVL 518
            LP   DWR KGAV PV++QG CGSC++F+T  ALE  +   TG+L+ LS Q +VDC            ++GC+GG M +AF+Y  +  G+  E  YPY GT++   C++ +S    +   F+ +   DE  +   + K GP+ V I+      + Y  GV     C R  DH VL
Sbjct:  182 LPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLG-------NNGCSGGYMPTAFQYASRY-GIAMESRYPYVGTEQ--RCRWQQSIAVVTDNGFNEIQPGDELALKHAVAKRGPVVVGISGSKRSFRFYKDGVYSEGNCGRP-DHAVL 345          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 5.677e-22
Identity = 68/172 (39.53%), Postives = 89/172 (51.74%), Query Frame = 3
Query:    9 ADFDWREKGAVG--PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            A+ DW +   V    VK+QGSCGSCW+FS  GALE    +   K   LSEQ LVDC    D E       GCNGG M+SAFEY +   GL   +DYPYT  D    CK    +    V  F+   +D     A  ++   ++VA++A   Q Y  GV     C++ L+HGV+
Sbjct:  111 AEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNE-------GCNGGWMDSAFEY-VADNGLAEAKDYPYTAKD--GTCKTSVKRPYTHVQGFT--DIDSCDELAQAIQERTVSVAVDANPWQFYRSGVLSK--CTKNLNHGVV 268          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.265e-21
Identity = 67/172 (38.95%), Postives = 88/172 (51.16%), Query Frame = 3
Query:    9 ADFDWREKGAVG--PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            A+ DW +   V    VK+QGSCGSCW+FS  GALE    +   +   LSEQ LVDC    D       + GCNGG M+SAFEY +   GL   +DYPYT  D    CK    +    V  F    +D     A  ++   +AVA++A   Q Y  GV     C++ L+HGV+
Sbjct:  111 AEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEY-VADNGLAEAKDYPYTAKD--GTCKTSVKRPYTHVQGFK--DIDSCDELAQTIQERTVAVAVDANPWQFYRSGVLSK--CTKNLNHGVV 268          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 1.652e-21
Identity = 63/173 (36.42%), Postives = 86/173 (49.71%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACK-FDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGV 515
            P   DWR KGAV PVK+QG+CGSCW+FST   +EG N + TG L+ LSEQ+LVDCD             GC GG   ++ +Y     G+   + YPY    + + C+  DK      +  +  V  + +      + N PL+V + A     Q Y  GV     C  +LDH V
Sbjct:  136 PQSIDWRAKGAVTPVKNQGACGSCWAFSTIATVEGINKIVTGNLLELSEQELVDCDKH---------SYGCKGGYQTTSLQYVAN-NGVHTSKVYPYQA--KQYKCRATDKPGPKVKITGYKRVPSNCETSFLGALANQPLSVLVEAGGKPFQLYKSGV-FDGPCGTKLDHAV 295          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: PAPA3_CARPA (Caricain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 2.157e-21
Identity = 65/173 (37.57%), Postives = 86/173 (49.71%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGV 515
            LP + DWR+KGAV PV+ QGSCGSCW+FS    +EG N + TGKLV LSEQ+LVDC+             GC GG    A EY  K G  +R + YPY         K     I  +     V   +E  +  N +   P++V + +     Q Y GG+     C  ++DH V
Sbjct:  133 LPENVDWRKKGAVTPVRHQGSCGSCWAFSAVATVEGINKIRTGKLVELSEQELVDCERR---------SHGCKGGYPPYALEYVAKNGIHLRSK-YPYKAKQGTCRAKQVGGPIVKTSGVGRVQPNNEGNL-LNAIAKQPVSVVVESKGRPFQLYKGGI-FEGPCGTKVDHAV 293          
The following BLAST results are available for this feature:
BLAST of CK740329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATV_GVCP8.758e-2337.21Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
MEX1_JACME1.144e-2234.88Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATW_MOUSE1.144e-2234.66Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATW_HUMAN1.951e-2235.23Cathepsin W OS=Homo sapiens GN=CTSW PE=1 SV=2[more]
CATM_MOUSE3.328e-2237.41Cathepsin M OS=Mus musculus GN=Ctsm PE=2 SV=1[more]
CATL_BRUPA3.328e-2237.14Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATL2_PARTE5.677e-2239.53Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATL1_PARTE1.265e-2138.95Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
PAPA2_CARPA1.652e-2136.42Chymopapain OS=Carica papaya PE=1 SV=2[more]
PAPA3_CARPA2.157e-2137.57Caricain OS=Carica papaya PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6473 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740329 ID=CK740329; Name=CK740329; organism=Citrus sinensis; type=EST; length=519bp
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTGC
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