CK740329

Overview
NameCK740329
Unique NameCK740329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:466..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.277e-21
Identity = 60/175 (34.29%), Postives = 89/175 (50.86%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL--DEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            LP  FDWR+K  V PV++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG    A  +  +    L+ +  YP+   + G    F +S+   SV +FS  +    ED++A  L+  GPL V ++A+  Q Y+GG+   +  S   +H VL
Sbjct:   99 LPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGGSPLCALRWLNETQLKLVADSQYPFKAVN-GQCRHFPQSQAGVSVKDFSAYNFRGQEDEMARALLSFGPLVVIVDAMSWQDYLGGIIQHHCSSGEANHAVL 263          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATO_HUMAN (Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.826e-20
Identity = 61/175 (34.86%), Postives = 89/175 (50.86%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG-GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV--VSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            LP  FDWR+K  V  V++Q  CG CW+FS  GA+E A  +    L  LS QQ++DC +          + GCNGG   +A  +  K    L+++ +YP+     G    F  S    S+  +S    S  ED++A  L+  GPL V ++AV  Q Y+GG+   +  S   +H VL
Sbjct:  108 LPLRFDWRDKQVVTQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCSYN---------NYGCNGGSTLNALNWLNKMQVKLVKDSEYPFK-AQNGLCHYFSGSHSGFSIKGYSAYDFSDQEDEMAKALLTFGPLVVIVDAVSWQDYLGGIIQHHCSSGEANHAVL 272          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 2.385e-20
Identity = 58/174 (33.33%), Postives = 88/174 (50.57%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGV-SCPYICSRRLDHGV 515
            +P   DWR+ GAV  VK+QG CG CW+F+    +EG   +  G LV LSEQ+++DC          +   GC GG +N A+++ +   G+  +E+YPY        C  +    +A +  +S V  +++      V N P+A  I+A     Q Y GGV S P  C   L+H +
Sbjct:    2 VPQSIDWRDYGAVNEVKNQGPCGGCWAFAAIATVEGIYKIRKGNLVYLSEQEVLDC----------AVSYGCKGGWVNRAYDFIISNNGVTTDENYPYRAYQ--GTCNANYFPNSAYITGYSYVRRNDESHMMYAVSNQPIAALIDASGDNFQYYKGGVYSGP--CGFSLNHAI 161          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CATW_FELCA (Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 3.115e-20
Identity = 61/176 (34.66%), Postives = 85/176 (48.30%), Query Frame = 3
Query:    3 LPADFDWRE-KGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRL-DHGVL 518
            +P   DWR+  G +  VK Q SC  CW+ +  G +E    +   + V LS Q+L+DC         G C  GC GG +  AF   L   GL  E+DYP+ G  + H C   K    A + +F ++  +E +IA  L   GP+ V IN   ++ Y  GV  + P  C   L DH VL
Sbjct:  128 VPPTCDWRKLDGVISSVKKQESCSCCWAMAAAGNIEALWAIKYRQSVELSVQELLDC---------GRCGDGCRGGFVWDAFITVLNNSGLASEKDYPFQGQVKPHRCLAKKRTKVAWIQDFIMLPDNEQKIAWYLATQGPITVTINMKLLKLYKKGVIEATPTSCDPFLVDHSVL 294          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 4.068e-20
Identity = 60/174 (34.48%), Postives = 87/174 (50.00%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDK-SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGV 515
            LP   DWR KGAV PVK QG C SCW+FST   +EG N + TG LV LSEQ+LVDCD +           GCN G  +++ +Y  + G  +R + YPY    +   C+ ++             V  + +    N + + P++V + +     Q Y GG+     C  ++DH V
Sbjct:  133 LPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVDCDKQ---------SYGCNRGYQSTSLQYVAQNGIHLRAK-YPYIA--KQQTCRANQVGGPKVKTNGVGRVQSNNEGSLLNAIAHQPVSVVVESAGRDFQNYKGGI-FEGSCGTKVDHAV 293          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 4.068e-20
Identity = 62/173 (35.84%), Postives = 83/173 (47.98%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGV 515
            +P   DWR+KGAV PVK+QGSCGSCW+FS    +EG   + TG L   SEQ+L+DCD             GCNGG   SA +   +  G+     YPY G  R +    +K   AA       V    +      + N P++V + A     Q Y GG+     C  ++DH V
Sbjct:  134 IPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQLVAQY-GIHYRNTYPYEGVQR-YCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVG-PCGNKVDHAV 294          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: ACP1_ENTHI (Cysteine proteinase ACP1 OS=Entamoeba histolytica GN=ACP1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 4.068e-20
Identity = 57/146 (39.04%), Postives = 76/146 (52.05%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 443
            P   DWR    + P KDQG CGSCW+F TT  LEG      GKL S SEQQLVDCD         + D+GC GG  +++ ++  +  GL  E DYPY        CK  K+ +A    +  V    E  +   + +NGP+AV ++A
Sbjct:   94 PESVDWRS--IMNPAKDQGQCGSCWTFCTTAVLEGRVNKDLGKLYSFSEQQLVDCD---------ASDNGCEGGHPSNSLKFIQENNGLGLESDYPYKAV--AGTCKKVKN-VATVTGSRRVTDGSETGLQTIIAENGPVAVGMDA 225          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CPP1_ENTHI (Cysteine proteinase 1 OS=Entamoeba histolytica GN=CPP1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.314e-20
Identity = 60/178 (33.71%), Postives = 95/178 (53.37%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRR---LDHGV 515
            P   DWR+KG V P++DQG+CGSC++F +  ALEG   +  G   + + LSE+ +V C  E         ++GCNGGL ++ + Y ++  G+ +E DYPYTG+D    C+ D  K  A + +++ V+ + +      +  G + V+I+A  V  Q Y  G      C      L+H V
Sbjct:   95 PKAVDWRKKGKVTPIRDQGNCGSCYTFGSIAALEGRLLIEKGGDSETLDLSEEHMVQCTRE-------DGNNGCNGGLGSNVYNYIME-NGIAKESDYPYTGSD--STCRSD-VKAFAKIKSYNRVARNNEVELKAAISQGLVDVSIDASSVQFQLYKSGAYTDTQCKNNYFALNHEV 261          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 5.314e-20
Identity = 57/173 (32.95%), Postives = 87/173 (50.29%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV-YMQTYIGGVSCPYICSRRLDHGVL 518
            +P   DWR+ GAV  VK+QG CGSCW+F++   +E    +  G LVSLSEQQ++DC          +   GC GG +N A+ + +   G+     YPY        CK +    +A +  ++ V  + ++     V N P+A A++A    Q Y  GV     C  RL+H ++
Sbjct:  123 VPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLDC----------AVSYGCKGGWINKAYSFIISNKGVASAAIYPYKAAK--GTCKTNGVPNSAYITRYTYVQRNNERNMMYAVSNQPIAAALDASGNFQHYKRGVFTG-PCGTRLNHAIV 282          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CPP3_ENTHI (Cysteine proteinase 3 (Fragment) OS=Entamoeba histolytica GN=CPNP PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 3.808e-18
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 443
            P   DWR +G V P++DQ  CGSC++F +  ALEG   +  G     + LSE+ LV C  +       + ++GCNGGL ++ ++Y ++  G+ +E DYPYTGTD    CK    K  A +  ++ V  + +      +  G + V+I+A
Sbjct:   88 PESVDWRAQGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGNANTLDLSEEHLVQCTRD-------NGNNGCNGGLGSNVYDYIIQ-NGVAKESDYPYTGTD--STCK-TNVKAFAKITGYNKVPRNNEAELKAALSQGLVDVSIDA 225          
The following BLAST results are available for this feature:
BLAST of CK740329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CATO_MOUSE6.277e-2134.29Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
CATO_HUMAN1.826e-2034.86Cathepsin O OS=Homo sapiens GN=CTSO PE=1 SV=1[more]
MDO1_PSEMR2.385e-2033.33Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
CATW_FELCA3.115e-2034.66Cathepsin W OS=Felis catus GN=CTSW PE=2 SV=2[more]
PAPA4_CARPA4.068e-2034.48Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
PAPA1_CARPA4.068e-2035.84Papain OS=Carica papaya PE=1 SV=1[more]
ACP1_ENTHI4.068e-2039.04Cysteine proteinase ACP1 OS=Entamoeba histolytica ... [more]
CPP1_ENTHI5.314e-2033.71Cysteine proteinase 1 OS=Entamoeba histolytica GN=... [more]
ANAN_ANACO5.314e-2032.95Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
CPP3_ENTHI3.808e-1834.23Cysteine proteinase 3 (Fragment) OS=Entamoeba hist... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_6473 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740329 ID=CK740329; Name=CK740329; organism=Citrus sinensis; type=EST; length=519bp
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTGC
back to top