CK740329

Overview
NameCK740329
Unique NameCK740329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length519
Libraries
Library NameType
Ridge pineapple sweet orange entire seedlingcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1496 contig Csv1_Contig1496:466..984. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 1.447e-17
Identity = 58/170 (34.12%), Postives = 87/170 (51.18%), Query Frame = 3
Query:   12 DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN-AVYMQTYIGGVSCPYICSRRLDHGVL 518
            + DWR   +V  VKDQ +CG CW+FST G++EG       K   LS Q+L+DCD         S  +GC GGL+ SA+EY  K  GL+  +D P+   D+   C   K+K   SV ++ V    E  +    + + P +V ++ +  +  Y  GV     C + L+H V+
Sbjct:  232 NLDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD---------SFSNGCQGGLLESAYEYVRKY-GLVSAKDLPF--VDKARRCSVPKAK-KVSVPSYHVFKGKE--VMTRSLTSSPCSVYLSVSPELAKYKSGVFTGE-CGKSLNHAVV 385          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CPP2_ENTHI (Cysteine proteinase 2 OS=Entamoeba histolytica GN=CPP2 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.447e-17
Identity = 51/149 (34.23%), Postives = 82/149 (55.03%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 443
            P   DWR++G V P++DQ  CGSC++F +  ALEG   +  G     + LSE+ +V C  +       + ++GCNGGL ++ ++Y ++  G+ +E DYPYTG+D    CK +    A       V   +E ++ A L   G + V+I+A
Sbjct:   95 PESVDWRKEGKVTPIRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHMVQCTRD-------NGNNGCNGGLGSNVYDYIIE-HGVAKESDYPYTGSD--STCKTNVKSFAKITGYTKVPRNNEAELKAAL-SQGLVDVSIDA 232          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.310e-15
Identity = 55/173 (31.79%), Postives = 80/173 (46.24%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA-VYMQTYIGGV-SCPYICSRRLDHGV 515
            +P   DWR+ GAV  VK+Q  CG+CW+F+    +E    +  G L  LSEQQ++DC          +   GC GG    AFE+ +   G+     YPY        CK D    +A +  ++ V  + +      V   P+ VA++A    Q Y  GV + P  C   L+H V
Sbjct:    2 VPQSIDWRDYGAVTSVKNQNPCGACWAFAAIATVESIYKIKKGILEPLSEQQVLDC----------AKGYGCKGGWEFRAFEFIISNKGVASGAIYPYKAAK--GTCKTDGVPNSAYITGYARVPRNNESSMMYAVSKQPITVAVDANANFQYYKSGVFNGP--CGTSLNHAV 160          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVS (Cysteine proteinase OS=Plasmodium vivax (strain Salvador I) PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.017e-15
Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK-LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            +P   D+REKG V   KDQG CGSCW+F++ G +E        K +++LSEQ++VDC            + GC+GG    +F Y ++  G+   +DY Y   D      +  K+K+  S    SV  + E+++   L + GP++V +      ++ GG      C+  L+H VL
Sbjct:  339 VPEILDYREKGIVHEPKDQGLCGSCWAFASVGNVECMYAKEHNKTILTLSEQEVVDC---------SKLNFGCDGGHPFYSFIYAIE-NGICMGDDYKYKAMDNLFCLNYRCKNKVTLS----SVGGVKENELIRALNEVGPVSVNVGVTDDFSFYGGGIFNGTCTEELNHSVL 498          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: ACP2_ENTHI (Cysteine proteinase ACP2 (Fragment) OS=Entamoeba histolytica GN=ACP2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 6.722e-15
Identity = 56/178 (31.46%), Postives = 88/178 (49.44%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG---KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI--NAVYMQTYIGGVSCPYICSRR---LDHGV 515
            P   DWR++G V P++DQ  CGSC++F +  ALEG   +  G     + LSE+ +  C  +       + ++GCNGGL ++ ++Y ++  G+ +E DYPYTG+D    CK +            V   +E ++ A L   G L V+I  ++   Q Y  G      C      L+H V
Sbjct:   91 PESVDWRKEGKVTPLRDQAQCGSCYTFGSLAALEGRLLIEKGGDANTLDLSEEHM-QCTRD-------NGNNGCNGGLGSNVYDYIIE-HGVAKESDYPYTGSD--STCKTNVKSFRKITGYTKVPRNNEAELKAAL-SQGLLDVSIDVSSAKFQLYKSGAYTDTKCKNNYFALNHEV 256          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP_PLAFA (Trophozoite cysteine proteinase OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.147e-14
Identity = 56/178 (31.46%), Postives = 86/178 (48.31%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN-----AVYMQTYIGGVSCPYICSRRLDHGVL 518
            +P   D+REKG V   KDQG CGSCW+F++ G +E         ++S SEQ++VDC  +         + GC+GG    +F Y L+   L   ++Y Y   D      +  K K++ S    S+ ++ E+Q+   L + GPL+V +        Y +    G      CS  L+H VL
Sbjct:  333 VPEILDYREKGIVHEPKDQGLCGSCWAFASVGNIESVFAKKNKNILSFSEQEVVDCSKD---------NFGCDGGHPFYSFLYVLQ-NELCLGDEYKYKAKDDMFCLNYRCKRKVSLS----SIGAVKENQLILALNEVGPLSVNVGVNNDFVAYSEGVYNGT-----CSEELNHSVL 491          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.688e-13
Identity = 57/171 (33.33%), Postives = 79/171 (46.20%), Query Frame = 3
Query:   12 DFDWREKGAVGPVKDQGS-CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV-YMQTYIGGVSCPYICSRRLDHGVL 518
            + +W    AV P+KDQG  CGSCW+FS+  ++E    L   K   LSEQ+LV+CD             GC GGL  +A EY + + G+  E + PYTG      C   K  I   V   S+  L  + +    +   P  V I     ++ Y GG+     C   L+H VL
Sbjct:  230 NLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCD---------KSSMGCAGGLPITALEY-IHSKGVSFESEVPYTGI--VSPC---KPSIKNKVFIDSISILKGNDVVNKSLVISPTVVGIAVTKELKLYSGGIFTGK-CGGELNHAVL 384          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: CYSP_PLAVN (Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.391e-12
Identity = 59/173 (34.10%), Postives = 82/173 (47.40%), Query Frame = 3
Query:    6 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKL-VSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRRLDHGVL 518
            P   D+R K    P KDQG+CGSCW+F+  G  E        ++ +S SEQQ+VDC  E         + GC+GG    AF Y +  G  + +E YPY G +    C   +  +   V     V  +E  +A N V  GP+ +A+ A      Y GGV     C+  L+H VL
Sbjct:  264 PDSRDYRSKFNFLPPKDQGNCGSCWAFAAIGNFEYLYVHTRHEMPISFSEQQMVDCSTE---------NYGCDGGNPFYAFLYMINNGVCLGDE-YPYKGHE-DFFCLNYRCSLLGRVHFIGDVKPNELIMALNYV--GPVTIAVGASEDFVLYSGGV-FDGECNPELNHSVL 422          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.122e-12
Identity = 32/34 (94.12%), Postives = 33/34 (97.06%), Query Frame = 3
Query:  417 GPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 518
            GPLAVAINA YMQTYIGGVSCPYICSRRL+HGVL
Sbjct:    1 GPLAVAINAAYMQTYIGGVSCPYICSRRLNHGVL 34          
BLAST of CK740329 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.550e-11
Identity = 35/103 (33.98%), Postives = 52/103 (50.49%), Query Frame = 3
Query:    3 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 311
            +P++ D R    V P++ QG CGSCW+FS   A E A        + LSEQ+LVDC          +   GC+G  +    EY ++  G++ E  YPY   ++
Sbjct:  109 VPSELDLRSLRTVTPIRMQGGCGSCWAFSGVAATESAYLAYRNTSLDLSEQELVDC----------ASQHGCHGDTIPRGIEY-IQQNGVVEERSYPYVAREQ 200          
The following BLAST results are available for this feature:
BLAST of CK740329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 154
Match NameE-valueIdentityDescription
CYSP_THEPA1.447e-1734.12Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CPP2_ENTHI1.447e-1734.23Cysteine proteinase 2 OS=Entamoeba histolytica GN=... [more]
BROM2_ANACO2.310e-1531.79Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP_PLAVS3.017e-1531.61Cysteine proteinase OS=Plasmodium vivax (strain Sa... [more]
ACP2_ENTHI6.722e-1531.46Cysteine proteinase ACP2 (Fragment) OS=Entamoeba h... [more]
CYSP_PLAFA1.147e-1431.46Trophozoite cysteine proteinase OS=Plasmodium falc... [more]
CYSP_THEAN3.688e-1333.33Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CYSP_PLAVN2.391e-1234.10Cysteine proteinase OS=Plasmodium vinckei PE=3 SV=... [more]
PAPA5_CARPA3.122e-1294.12Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
PEPT1_DERFA1.550e-1133.98Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_6473 Ridge pineapple sweet orange entire seedling Citrus sinensis cDNA clone RSE63H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK740329 ID=CK740329; Name=CK740329; organism=Citrus sinensis; type=EST; length=519bp
ATTTGCCGGCGGATTTTGATTGGAGAGAGAAGGGCGCTGTAGGCCCTGTT
AAAGATCAGGGTTCATGCGGATCATGCTGGAGTTTCAGTACAACAGGGGC
CTTGGAAGGTGCTAACTTCCTGGCAACTGGAAAGCTTGTGAGCCTCAGTG
AGCAACAGCTTGTGGATTGCGATCATGAGTGTGATCCTGAGGAACCAGGT
TCTTGTGATTCTGGATGCAATGGTGGGCTTATGAACAGTGCTTTTGAGTA
CACACTCAAGGCTGGTGGGCTTATGCGGGAGGAAGACTATCCTTACACCG
GCACTGATCGTGGCCACGCCTGCAAATTCGATAAGAGTAAGATTGCTGCC
TCAGTGGCCAACTTCAGTGTTGTCTCCCTTGATGAGGATCAAATTGCTGC
CAATCTTGTGAAAAATGGTCCCCTTGCAGTGGCCATCAATGCCGTGTACA
TGCAGACATACATTGGGGGAGTTTCCTGCCCATACATATGCTCGAGGCGA
TTGGACCATGGAGTGTTGC
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