CK740330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLLC (Eukaryotic translation initiation factor 5A-3 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 8.462e-81 Identity = 146/159 (91.82%), Postives = 153/159 (96.23%), Query Frame = 1 Query: 85 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 561 MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLT+NGNTKDDLRLPTDE LL+ +KDGFAEGKDLV++VMS+MGEEQI ALKDIGPK Sbjct: 1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTDNGNTKDDLRLPTDENLLSLIKDGFAEGKDLVVSVMSAMGEEQINALKDIGPK 159
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A3_SOLTU (Eukaryotic translation initiation factor 5A-3 OS=Solanum tuberosum GN=EIF5A3 PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 1.885e-80 Identity = 145/160 (90.62%), Postives = 154/160 (96.25%), Query Frame = 1 Query: 85 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 564 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDE+LL Q+KDGF EGKDLV++VMS+MGEEQI A+KDIG K+ Sbjct: 1 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDESLLKQVKDGFQEGKDLVVSVMSAMGEEQINAIKDIGTKN 160
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 9.356e-80 Identity = 143/159 (89.94%), Postives = 151/159 (94.97%), Query Frame = 1 Query: 85 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 561 MSDEEH FESKADAGASKTYPQQAGTIRK G+IVIK R CKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD+ LLTQ+KDGF EGKDLV++VMS+MGEEQICALKDIGPK Sbjct: 1 MSDEEHQFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDALLTQIKDGFGEGKDLVVSVMSAMGEEQICALKDIGPK 159
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A2_SOLLC (Eukaryotic translation initiation factor 5A-2 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.222e-79 Identity = 143/160 (89.38%), Postives = 153/160 (95.62%), Query Frame = 1 Query: 85 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 564 MSDEEHHFESKADAGASKT+PQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNRTDYQLIDISEDGFVSLLTE+GNTKDDLRLPTDE LL Q+KDGF EGKDLV++VMS+MGEEQI A+KD+G K+ Sbjct: 1 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDENLLKQVKDGFQEGKDLVVSVMSAMGEEQINAVKDVGTKN 160
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 293.508 bits (750), Expect = 6.064e-79 Identity = 143/161 (88.82%), Postives = 154/161 (95.65%), Query Frame = 1 Query: 85 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDI-VPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 564 MSDEEH FESKADAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLE++ VPSSHN DVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDL+LPTD++LLTQ+KDGFAEGKDLV++VMS+MGEEQICALKDIG K+ Sbjct: 1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEEVYVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLKLPTDDSLLTQIKDGFAEGKDLVVSVMSAMGEEQICALKDIGGKN 161
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2) HSP 1 Score: 290.812 bits (743), Expect = 3.931e-78 Identity = 139/160 (86.88%), Postives = 151/160 (94.38%), Query Frame = 1 Query: 85 MSD-EEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 561 MSD EEHHFESKADAGASKTYPQQAGT+RKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN D+PHVNRT+YQLIDISEDGFVSLLT +GNTKDDLRLPTDETL+ Q+K+GF GKDLV+TV S+MGEEQICALKD+GPK Sbjct: 1 MSDSEEHHFESKADAGASKTYPQQAGTVRKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDIPHVNRTEYQLIDISEDGFVSLLTSDGNTKDDLRLPTDETLVAQIKEGFESGKDLVVTVQSAMGEEQICALKDVGPK 160
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A3_ARATH (Eukaryotic translation initiation factor 5A-3 OS=Arabidopsis thaliana GN=At1g69410 PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 1.398e-75 Identity = 135/159 (84.91%), Postives = 150/159 (94.34%), Query Frame = 1 Query: 85 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 561 MSD+EHHFES +DAGASKTYPQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNR DYQLIDISEDGFVSLLT+NG+TKDDL+LPTDE LLTQLK+GF EGKD+V++VMS+MGEEQ+CALK++GPK Sbjct: 1 MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK 158
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 3.114e-75 Identity = 137/159 (86.16%), Postives = 149/159 (93.71%), Query Frame = 1 Query: 85 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPK 561 MSDEEHHFES +DAGASKTYPQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNRTDYQLIDISEDG+VSLLT+NG+TKDDL+LP D+TLL Q+K GF +GKDLV++VMS+MGEEQI ALKDIGPK Sbjct: 1 MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDDTLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKDIGPK 158
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_DIACA (Eukaryotic translation initiation factor 5A OS=Dianthus caryophyllus PE=2 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 2.468e-72 Identity = 126/156 (80.77%), Postives = 145/156 (92.95%), Query Frame = 1 Query: 85 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDI 552 MSD++HHFES ADAGASKTYPQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+GKKLEDIVPSSHN DVPHVNR DYQL+DI+EDGFVSLLT++G+TKDDL+LP DE L+ Q+K+GF GKDL+L+VM +MGEEQICA+KD+ Sbjct: 1 MSDDDHHFESSADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRVDYQLLDITEDGFVSLLTDSGDTKDDLKLPADEALVKQMKEGFEAGKDLILSVMCAMGEEQICAVKDV 156
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A2_ARATH (Eukaryotic translation initiation factor 5A-2 OS=Arabidopsis thaliana GN=At1g26630 PE=1 SV=1) HSP 1 Score: 257.299 bits (656), Expect = 4.816e-68 Identity = 122/157 (77.71%), Postives = 142/157 (90.45%), Query Frame = 1 Query: 85 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIG 555 MSD+EHHFE+ +++GASKTYPQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF+ KKLEDIVPSSHN DVPHVNR DYQLIDI+EDGFVSLLT++G TKDDL+LPTD+ L Q++ GF EGKD+V++VMSSMGEEQICA+K++G Sbjct: 1 MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDDGLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKEVG 156 The following BLAST results are available for this feature:
BLAST of CK740330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740330 ID=CK740330; Name=CK740330; organism=Citrus sinensis; type=EST; length=637bpback to top |