CK740330
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A2_CAEEL (Eukaryotic translation initiation factor 5A-2 OS=Caenorhabditis elegans GN=iff-2 PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.279e-36 Identity = 84/159 (52.83%), Postives = 113/159 (71.07%), Query Frame = 1 Query: 85 MSDEEH---HFESKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLT-VMSSMGEEQICALK 546 MSD+ H HF + D+GA+ T+P+Q +RKN +++IKGRPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I +DG+ SL+ E+ KDDL+LP D L Q++D + + + VL V+S++GEE I K Sbjct: 1 MSDDHHDDEHFHT-GDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLP-DTELGQQIRDAYEKDEGSVLVQVVSAIGEEAILGWK 156
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_DICDI (Eukaryotic translation initiation factor 5A OS=Dictyostelium discoideum GN=eif5a PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 2.850e-36 Identity = 71/145 (48.97%), Postives = 110/145 (75.86%), Query Frame = 1 Query: 112 SKADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 546 ++A +GAS T+P Q +RKNG++VIKG PCK+V++STSKTGKHGHAK + IDIF+GKK E+I PS+HN DVP+V+R +Y ++D+ +DG++SLL G K+DL LP D+ + ++ EGK+ +++V+S++G+E + ++K Sbjct: 13 AQAGSGASLTFPIQCSALRKNGFVVIKGFPCKIVDMSTSKTGKHGHAKVNITAIDIFTGKKYEEICPSTHNIDVPNVSRKEYTVMDV-QDGYLSLLDAGGEVKEDLALPEDD-IGKEITQMLKEGKEPLVSVISALGKEGVVSVK 155
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A1_CAEEL (Eukaryotic translation initiation factor 5A-1 OS=Caenorhabditis elegans GN=iff-1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.550e-34 Identity = 78/156 (50.00%), Postives = 109/156 (69.87%), Query Frame = 1 Query: 94 EEHHFESK---ADAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLL-TENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLT-VMSSMGEEQICALK 546 E+HH E + A++GA+ T+P+Q +RKN +++I+GRPCK+VE+STSKTGKHGHAK H V IDIF+ KKLEDI PS+HN DVP V R +Y L+ I EDGF SL+ E+ KDDL++P + L +++ + + VL V+++ GEE I K Sbjct: 3 EDHHDEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKKLEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGD-LGNTIREALEKDEGSVLVQVVAACGEEAILGYK 156
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_THEPD (Translation initiation factor 5A OS=Thermofilum pendens (strain Hrk 5) GN=eIF5A PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.245e-15 Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 1 Query: 139 TYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 474 T P++AG I+ +IVI G PCKVVEV SKTGKHG AK VGI F G K +VP+ +VP + + Q++ D V L+ + ++ +P +E + ++L +G Sbjct: 3 TRPEEAGNIKVGSFIVIDGEPCKVVEVEKSKTGKHGSAKARIVGIGFFDGGKRSIVVPTDARVEVPIIKKFTAQVVAFVGDN-VQLMNLEDYSTFEIPMPQEEEIKSKLSEG 113
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: YE034_YEAST (Putative uncharacterized protein YEL034C-A OS=Saccharomyces cerevisiae GN=YEL034C-A PE=5 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.004e-14 Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = -2 Query: 166 ANILEGTDLLLTH*RHDSQNQVLPLSKTVLELGQQSLIGWEPQIILGVPIFSQQTHKSILRNINQLIVGTVDMGNIRVMRRGDNIFQLLSTEDINSNKVALSMTVLSSLGGGDFHNLAGTAFDDDVAILT 555 ++ LEG TH D +QVL K+ L+ Q W IIL V + Q ++++ N+ QL+ ++D N V+ R IFQLL++EDIN N++ S+TVL+SL G NL + DD+ +L+ Sbjct: 27 SSFLEGDGGFFTHSGDDGNHQVLTFIKSSLQTVTQFTF-WSLDIILSVTVHVHQRQETVI-NVQQLVFVSLDNWNFHVVSRWRQIFQLLTSEDINGNQMDFSVTVLTSLRSGHVDNLTWSTLDDNETVLS 154
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_SCHMA (Eukaryotic translation initiation factor 5A (Fragment) OS=Schistosoma mansoni PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.595e-13 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 1 Query: 121 DAGASKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVG 270 D GASKT P+Q +RK G++V+K RPCK+VE+STSKTGKHG AK H VG Sbjct: 3 DFGASKTLPKQCSALRKGGHVVMKDRPCKIVEMSTSKTGKHGSAKVHLVG 52
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_IGNH4 (Translation initiation factor 5A OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=eIF5A PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 5.782e-13 Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 1 Query: 133 SKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 474 SKTY G ++ +I+I G PCK+VE+S +KTGKHG AK H V I + SG K + P +VP + + Q++ I+ D V L+ ++ LP +E L ++L+ G Sbjct: 2 SKTYAT-LGELKPGNFIMIDGEPCKIVEMSKAKTGKHGSAKAHVVAISLISGAKKTFVAPVDTRVEVPIIEKRVGQVLAITGDS-VQLMDMETYDTFEVPLPEEEELKSRLEPG 113
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_SULTO (Translation initiation factor 5A OS=Sulfolobus tokodaii GN=eif5a PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 37/106 (34.91%), Postives = 60/106 (56.60%), Query Frame = 1 Query: 157 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 474 G ++ Y+VI G PC+VVE+S +KTGKHG AK + V I +F+G+K + P +VP + + Q++ D + EN T D+ PTD ++ +++ G Sbjct: 9 GDLKVGNYVVIDGEPCRVVEISKAKTGKHGSAKANIVAIGLFTGQKRTLMAPVDQQVEVPIIEKHIGQILADKGDTITIMDMENYET-FDIEKPTDADIVDKIRPG 113
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_STAMF (Translation initiation factor 5A OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=eIF5A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.682e-12 Identity = 42/114 (36.84%), Postives = 62/114 (54.39%), Query Frame = 1 Query: 133 SKTYPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDG 474 SKTY G ++ +I+I G PC++VE+S +KTGKHG AK H V I +F+G K + P +VP + + Q+I D + E T ++ P+DE L +LK G Sbjct: 2 SKTYAT-LGELKPGNFIIIDGEPCRIVEMSKAKTGKHGSAKAHVVAIGLFTGNKKTLVAPVDQRVEVPVIEKRVGQIIADMGDLLQVMDMETFET-FEVEKPSDEKLREKLKPG 113
BLAST of CK740330 vs. ExPASy Swiss-Prot
Match: IF5A_METS5 (Translation initiation factor 5A OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=eIF5A PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.748e-12 Identity = 42/130 (32.31%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 157 GTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNSDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 546 G +++ YIVI G PC+VVEV+ +KTGKHG AK + + + IF+G K + P +VP + + Q+I D + E T ++ +PT+E + +++K KD + MG ++I +K Sbjct: 9 GEMKEGSYIVIDGEPCRVVEVTKAKTGKHGSAKANIIAVSIFTGAKKTLMAPVDSTVEVPIIEKRMGQVISNVGDKVQIMDLETYET-FEIDMPTEEDVASKIK------KDAEVEYWEVMGRKKIVRVK 131 The following BLAST results are available for this feature:
BLAST of CK740330 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CK740330 ID=CK740330; Name=CK740330; organism=Citrus sinensis; type=EST; length=637bpback to top |