CK932608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB4B_MOUSE (Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19 Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 345 IWDTAGQERFR++T SYYRGA G ++VYD+T R+T+ +L+ L S N + +L GNK D + ER VT E FA+E +F+E SA T NV++ F + IL+ Sbjct: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPN--IVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILN 171
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB4B_HUMAN (Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19 Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 345 IWDTAGQERFR++T SYYRGA G ++VYD+T R+T+ +L+ L S N + +L GNK D + ER VT E FA+E +F+E SA T NV++ F + IL+ Sbjct: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPN--IVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILN 171
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB4B_CANFA (Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19 Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 345 IWDTAGQERFR++T SYYRGA G ++VYD+T R+T+ +L+ L S N + +L GNK D + ER VT E FA+E +F+E SA T NV++ F + IL+ Sbjct: 61 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPN--IVVILCGNKKDLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILN 171
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB21_CANFA (Ras-related protein Rab-21 OS=Canis familiaris GN=RAB21 PE=3 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19 Identity = 53/154 (34.42%), Postives = 85/154 (55.19%), Query Frame = 1 Query: 4 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL--LAEGSKGLKKNIFKQ------KPPEADAAASGCC 441 AIWDTAGQERF L YYR + G I+VYD+T D+F + + W KE+ N+ C+ +VGNK+D E ER V+ +E ++A G SAK +++ F +L ++++T + A+G+ + ++ P+A ++ GCC Sbjct: 69 AIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKMLGNEICL-CIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDEPQAQSSGGGCC 220
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB21_BOVIN (Ras-related protein Rab-21 OS=Bos taurus GN=RAB21 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.879e-19 Identity = 54/154 (35.06%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 4 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL--LAEGSKGLKKNIFKQ------KPPEADAAASGCC 441 AIWDTAGQERF L YYR + G I+VYD+T D+F + + W KE+ N+ C+ +VGNKVD E ER V+ +E ++A G SAK +++ F +L ++++T + A+G+ + ++ P+A + GCC Sbjct: 68 AIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKMLGNEICL-CIVGNKVDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGAARRGVQIIDDEPQAQSVGGGCC 219
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.678e-19 Identity = 50/104 (48.08%), Postives = 67/104 (64.42%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 318 IWDTAGQERFRT+TSS+YRGA G+++ YDVT + T+ N+ +W +EI Y ++LVGNK D E ++V +A G FIE SA T VNV++ F Sbjct: 60 IWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVG-LWMQEIQRYGV-LGVSRVLVGNKCDLEDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAF 161
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB21_HUMAN (Ras-related protein Rab-21 OS=Homo sapiens GN=RAB21 PE=1 SV=3) HSP 1 Score: 94.3597 bits (233), Expect = 7.678e-19 Identity = 53/154 (34.42%), Postives = 84/154 (54.55%), Query Frame = 1 Query: 4 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSL--LAEGSKGLKKNIFKQ------KPPEADAAASGCC 441 AIWDTAGQERF L YYR + G I+VYD+T D+F + + W KE+ N+ C+ +VGNK+D E ER V+ +E ++A G SAK +++ F +L ++++T + A+G+ + ++ P+A + GCC Sbjct: 71 AIWDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKN-WVKELRKMLGNEICL-CIVGNKIDLEKERHVSIQEAESYAESVGAKHYHTSAKQNKGIEELFLDLCKRMIETAQVDERAKGNGSSQPGTARRGVQIIDDEPQAQTSGGGCC 222
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAA1C_ARATH (Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.678e-19 Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339 IWDTAGQER+R +TS+YYRGA G ++VYDVTR TF N+ + W KE+ + T+ + + +LVGNK D V ++ +FA + F+E SA NV+ F E++ +I Sbjct: 66 IWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNH-TDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQI 174
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RB11C_DICDI (Ras-related protein Rab-11C OS=Dictyostelium discoideum GN=rab11C PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.003e-18 Identity = 62/163 (38.04%), Postives = 81/163 (49.69%), Query Frame = 1 Query: 10 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKIL-----DTPSLLAEGSKGLKKNIFKQKPPEADAA--------------ASGCC 441 WDTAGQERFR +TS YYRGA G ++VYD+T + +F N++ W E+ QD + ++VGNK D E R V KE FA F+E SA NV Q FE L+ I P ++ + L N K+ P +D A SGCC Sbjct: 64 WDTAGQERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTR-WLNEL-REMAEQDILIMMVGNKSDLEMSREVPTKEAQAFAESNKISFLETSALNSTNVNQSFERLLTDIYHLVSSKKPMVVDDTQNWLVPNQGKKLTPLSDPAPQLTANTTSTHQEKKSGCC 224
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.003e-18 Identity = 53/145 (36.55%), Postives = 78/145 (53.79%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 441 IWDTAGQER+ +L YYRGAQ I+VYD+T DTF + W KE+ + + + L GNK D ++R V ++ +A + LF+E SAKT +NV + F + K+ A G G + + Q+ + + S CC Sbjct: 74 IWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKN-WVKELQ-RQASPNIVIALAGNKADLATKRAVDFQDAQTYADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPGRNRVVDLQE--SSQPSRSQCC 214 The following BLAST results are available for this feature:
BLAST of CK932608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 477
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932608 ID=CK932608; Name=CK932608; organism=Citrus sinensis; type=EST; length=778bpback to top |