CK932608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: YPTV1_VOLCA (GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.035e-23 Identity = 59/111 (53.15%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339 IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ +++ KLLVGNK D ++VV + FA E G F+E SAK NV+Q F + +I Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLAEIDRYA-SENVNKLLVGNKSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB12_CANFA (Ras-related protein Rab-12 (Fragment) OS=Canis familiaris GN=RAB12 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.035e-23 Identity = 59/113 (52.21%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREY-GCLFIECSAKTRVNVQQCFEELVLKIL 342 IWDTAGQERF ++TS+YYR A+GII+VYD+T+++TF +L W K ID Y+ ++D LLVGNK+D E++R +T+++G FA E G F E SAK NV + F +LV IL Sbjct: 59 IWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPK-WMKMIDKYA-SEDAELLLVGNKLDCETDREITRQQGEKFAHEITGMRFCEASAKDNFNVDEIFLKLVDDIL 169
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.352e-23 Identity = 54/120 (45.00%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPS 354 IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++T+ K+L+GNK D ++VV G + A EYG F+E SAK +NV++ F +++ +++DTP+ Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATD-SVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPN 185
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.352e-23 Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL---KKNI-FKQKPP 411 IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +LVGNK D E ERV++ + G + + G F E SAK +NV+Q FE LV I D S E + K+N K+ PP Sbjct: 83 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-ILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPP 219
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.352e-23 Identity = 53/104 (50.96%), Postives = 78/104 (75.00%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 318 IWDTAGQE FR++T SYYRGA G ++VYD+TRR+TF +L+ W ++ +S++ + + +L+GNK D ES R V ++EG FARE+G +F+E SAKT NV++ + Sbjct: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAY 160
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.766e-23 Identity = 62/145 (42.76%), Postives = 83/145 (57.24%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAASGCC 441 IWDTAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y+ + +LLVGNK D ++VV FA F+E SAK NV+Q F + +I + S K ++ + ++S CC Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAV-EGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAKSSVKVGQGTNVSQSSSNCC 203
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB12_HUMAN (Putative Ras-related protein Rab-12 OS=Homo sapiens GN=RAB12 PE=5 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 1.766e-23 Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREY-GCLFIECSAKTRVNVQQCFEELVLKIL 342 IWDTAGQERF ++TS+YYR A+GII+VYD+T+++TF +L W K ID Y+ ++D LLVGNK+D E++R +T+++G FA++ G F E SAK NV + F +LV IL Sbjct: 95 IWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPK-WMKMIDKYA-SEDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDIL 205
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: YPT1_PHYIN (Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.306e-23 Identity = 58/111 (52.25%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339 IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ ++ KLLVGNK D ++RVV+ FA G F+E SAK NV++ F + +I Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLVGNKSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI 169
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.306e-23 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 354 IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D WA +I YS + + +LVGNK D E ERVV ++G A + G F E SAK ++V+Q FE LV I D S Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQV-ILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS 188
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 2.306e-23 Identity = 57/116 (49.14%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 354 IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D WA +I YS + + +LVGNK D E ERVV ++G A + G F E SAK ++V+Q FE LV I D S Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WATQIKTYSWDNAQV-ILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS 188 The following BLAST results are available for this feature:
BLAST of CK932608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 477
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932608 ID=CK932608; Name=CK932608; organism=Citrus sinensis; type=EST; length=778bpback to top |