CK932608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 55/113 (48.67%), Postives = 76/113 (67.26%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILD 345 IWDTAGQER+RT+T++YYRGA G I++YD+T ++F ++ D W +I YS ++ +LVGNK D +SERVV+ G A + G F E SAK +NV+ FE+LV I D Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQD-WCTQIKTYSW-ENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICD 185
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 61/141 (43.26%), Postives = 85/141 (60.28%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGLKKNIFKQKPPEADAAA 429 IWDTAGQER+RT+T++YYRGA G +++YD+ +++F + D WA +I YS + + +LVGNK D E ERVV ++G A + G F E SAK +NV+Q FE LV I + + E S N + P DA A Sbjct: 75 IWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQD-WATQIKTYSWDNAQV-ILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSSSGSN--GKGPAVGDAPA 211
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 59/139 (42.45%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL----KKNIFKQKPP 411 IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +L GNK D E ERVV+ + G + G F E SAK +NV+Q FE LV I D S E + + K+ PP Sbjct: 83 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-ILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQSTRLKETPP 219
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 59/139 (42.45%), Postives = 82/139 (58.99%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEGSKGL----KKNIFKQKPP 411 IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +L GNK D E ERVV+ + G + G F E SAK +NV+Q FE LV I D S E + + K+ PP Sbjct: 83 IWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-ILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQSTRLKETPP 219
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.711e-23 Identity = 51/111 (45.95%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339 IWDTAGQERFR++T +YYR A ++++YD+T +D+F N+ W EI Y+ QD + +L+GNKVD ERVV +++G A+EYG F+E SAK+ +NV F + ++ Sbjct: 118 IWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNI-QAWLTEIQEYA-QQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKEL 226
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.145e-22 Identity = 53/120 (44.17%), Postives = 83/120 (69.17%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF----EELVLKILDTPS 354 IWDTAGQERFRT+T++YYRGA GI++VYDVT +F ++ + W + I+ ++++ K+L+GNK D ++VV G + A EYG F+E SAK VNV++ F +++ +++DTP+ Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGSIRN-WIRNIEQHASD-SVNKMLIGNKCDMTEKKVVDSSRGKSLADEYGIKFLETSAKNSVNVEEAFIGLAKDIKKRMIDTPN 185
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 1.145e-22 Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCF 318 IWDTAGQERFR++T +YYR AQ ++++YD+T + +F N+ W EI Y+ +D + +L+GNK D SERV+ ++G AREYG F+E SAKT +NV+ F Sbjct: 83 IWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIR-AWLTEIHEYA-QRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAF 184
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.145e-22 Identity = 50/111 (45.05%), Postives = 76/111 (68.47%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKI 339 IWDTAGQERFR++T +YYR A ++++YD+T +D+F N+ W EI Y+ QD + +L+GNKVD +RVV +++G A+EYG F+E SA+T +NV F + ++ Sbjct: 121 IWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNI-QAWLTEIQEYA-QQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKEL 229
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.495e-22 Identity = 58/139 (41.73%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG------SKGLKKNIFKQK 405 IWDTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++ + D K+++GNK D +R V+K+ G A +YG F+E SAK +NV+ F L I EG S G+K + +QK Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHA-SADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHGVKITVEQQK 197
BLAST of CK932608 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.495e-22 Identity = 58/139 (41.73%), Postives = 85/139 (61.15%), Query Frame = 1 Query: 7 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDVWAKEIDLYSTNQDCIKLLVGNKVDKESERVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLAEG------SKGLKKNIFKQK 405 IWDTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++ + D K+++GNK D +R V+K+ G A +YG F+E SAK +NV+ F L I EG S G+K + +QK Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHA-SADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSSHGVKITVEQQK 197 The following BLAST results are available for this feature:
BLAST of CK932608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 477
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932608 ID=CK932608; Name=CK932608; organism=Citrus sinensis; type=EST; length=778bpback to top |