CK932628

Overview
NameCK932628
Unique NameCK932628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 7.253e-21
Identity = 60/145 (41.38%), Postives = 89/145 (61.38%), Query Frame = 1
Query:  418 SYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            ++GY    GK    MED+  +    V+G  +GLF +FDGH G   A+Y++ NLF N+++   F +DTK+AI +AY  TD+   +      +  GSTA T IL+ G  L++ANVGDSRAV+ + G A  +S DH+P +  E++ IE
Sbjct:   31 AHGYDFVKGKAGHPMEDYVVSEFKKVDGHDLGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTKNAIRNAYISTDAVILEQSLKLGK-GGSTAVTGILIDGKTLVIANVGDSRAVMSKNGVASQLSVDHEPSK--EQKEIE 172          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C27_ORYSJ (Probable protein phosphatase 2C 27 OS=Oryza sativa subsp. japonica GN=Os02g0799000 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 59/147 (40.14%), Postives = 85/147 (57.82%), Query Frame = 1
Query:  433 SSPGKRSSMEDFYETRID--------GVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNR-DAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            S  G R  MED +    D         V+ EI+  +GVFDGHGG  AA YV+ NL   ++    F  + +  +  ++  TDS+F +  ++QN   +G+TA TA++ G  LLVAN GD RAV+ R G AI +S+DH+    +ER+RIE
Sbjct:   59 SDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGVFDGHGGKDAAHYVRDNLPRVIVEDADFPLELEKVVRRSFVQTDSQFAERCSHQNALSSGTTALTAMIFGRSLLVANAGDCRAVLSRRGTAIEMSKDHRTCCLNERKRIE 205          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C22_ARATH (Probable protein phosphatase 2C 22 OS=Arabidopsis thaliana GN=At2g25620 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 2.110e-20
Identity = 61/150 (40.67%), Postives = 87/150 (58.00%), Query Frame = 1
Query:  424 GYASSPGKRSSMEDFY---ETRIDGV-----EGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            G  S  G RSSMED Y   +  +D       E      +GVFDGHGG  AAE+  H++   ++   +F S+    ++ A+  TD+ F ++ + + +  +G+TA  AIL G  L+VAN GD RAV+ R G AI +SRDHKP  + ER+RIE
Sbjct:   91 GAWSDIGSRSSMEDAYLCVDNFMDSFGLLNSEAGPSAFYGVFDGHGGKHAAEFACHHIPRYIVEDQEFPSEINKVLSSAFLQTDTAFLEACSLDGSLASGTTALAAILFGRSLVVANAGDCRAVLSRQGKAIEMSRDHKPMSSKERRRIE 240          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C57_ORYSJ (Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.600e-20
Identity = 57/144 (39.58%), Postives = 82/144 (56.94%), Query Frame = 1
Query:  442 GKRSSMEDFY--------ETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSEN-NQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            G R +MED +        E  ++  E      +GVFDGHGG  AA++V  NL   ++    F  + + A++ A+  TD+ F  + + N +  +G+TA  A++VG  LLVAN GD RAV+C  G AI +SRDHKP    E+ RIE
Sbjct:   75 GSRHTMEDVFICSDNLMKEFGVESFEDGPSAFYGVFDGHGGKHAADFVCSNLARFIVEDEDFPREIEKALSSAFLQTDAAFADACSVNSSLASGTTALAALVVGRSLLVANAGDCRAVLCCRGKAIEMSRDHKPSCNREKVRIE 218          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.368e-19
Identity = 64/167 (38.32%), Postives = 97/167 (58.08%), Query Frame = 1
Query:  367 ADDSPASGGGLSQ-NGK-FSYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGD----RLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            +   P +G G ++ +GK   +GY    GK +  MED+            +GLF +FDGH G    ++++ +LF N+++ P+F+S+ ++AI +AY  TD++  +S     R  GSTA TAIL+       L+VANVGDSRAVI + G A  +S DH+P +  ER  IE
Sbjct:   19 SSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQEGEHDLGLFAIFDGHLGHTVPDFLRSHLFDNILKQPEFLSNPQAAIRNAYQLTDAKILESAAELGR-GGSTAVTAILISSENSVNLVVANVGDSRAVISKSGVAKQLSVDHEPNK--ERHSIE 182          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C02_ARATH (Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.787e-19
Identity = 62/162 (38.27%), Postives = 87/162 (53.70%), Query Frame = 1
Query:  373 DSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIV-GLFGVFDGHGGARAAEYVKHNLFSNLIRH---PKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            D+P       +     Y      GKR +MED +   I  ++G+    +FGV+DGHGG  AAE+   NL SN++      +  S  + A+   Y  TDSEF K +N +    GS   TA++    L+VAN GD RAV+  GG A A++ DH+P + DER RIE
Sbjct:  107 DTPREESRAVEREGDGYSVYCKRGKREAMEDRFSA-ITNLQGDPKQAIFGVYDGHGGPTAAEFAAKNLCSNILGEIVGGRNESKIEEAVKRGYLATDSEFLKEKNVKG---GSCCVTALISDGNLVVANAGDCRAVLSVGGFAEALTSDHRPSRDDERNRIE 264          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C28_ARATH (Probable protein phosphatase 2C 28 OS=Arabidopsis thaliana GN=At2g34740 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.198e-19
Identity = 50/124 (40.32%), Postives = 78/124 (62.90%), Query Frame = 1
Query:  457 MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAI-AVSRDHKPEQ 822
            MEDF       V+G  +GL+ +FDGH G+  A+Y++++LF N++  P F  + K AI  AY  TD      +N      GSTA TAI++ G +++VANVGDSRA++CR  + +  ++ DH+P++
Sbjct:    1 MEDFIVADTKTVKGHNLGLYAIFDGHSGSDVADYLQNHLFDNILSQPDFWRNPKKAIKRAYKSTDDYI--LQNVVGPRGGSTAVTAIVIDGKKIVVANVGDSRAILCRESDVVKQITVDHEPDK 122          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C39_ARATH (Probable protein phosphatase 2C 39 OS=Arabidopsis thaliana GN=At3g15260 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.789e-19
Identity = 62/160 (38.75%), Postives = 90/160 (56.25%), Query Frame = 1
Query:  376 SPASGGGLSQNGK-FSYGYASSPGKR-SSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVG-DRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            S  SG G S+  K  ++G+    GK    MED+   +   V+   +GLF +FDGH      +Y+  +LF N+++ P F  + + AI  AY  TD+      ++  +  GSTA TAIL+   +L+VANVGDSRAVIC+ G A  +S DH+P    E+  IE
Sbjct:   26 SADSGKGKSKMLKQITHGFHLVKGKAFHEMEDYVVAKFKEVDDNELGLFAIFDGHLSHEIPDYLCSHLFENILKEPNFWQEPEKAIKKAYYITDTTILDKADDLGK-GGSTAVTAILINCQKLVVANVGDSRAVICQNGVAKPLSVDHEPNM--EKDEIE 182          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C27_ARATH (Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.158e-18
Identity = 49/111 (44.14%), Postives = 69/111 (62.16%), Query Frame = 1
Query:  514 FGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            +GVFDGHGG  AA +V+ N+   ++    F    K AI  A+   D EF   +++ +  +G+TA TA + G RL++AN GD RAV+ R G AI +S+DHKP  T E+ RIE
Sbjct:  124 YGVFDGHGGTDAAHFVRKNILRFIVEDSSFPLCVKKAIKSAFLKADYEFA-DDSSLDISSGTTALTAFIFGRRLIIANAGDCRAVLGRRGRAIELSKDHKPNCTAEKVRIE 233          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C54_ORYSJ (Probable protein phosphatase 2C 54 OS=Oryza sativa subsp. japonica GN=Os06g0179700 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.580e-18
Identity = 53/146 (36.30%), Postives = 79/146 (54.11%), Query Frame = 1
Query:  433 SSPGKRSSMEDFYETRID--------GVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            S  G R  MED +    D         V+ E +  +GVFDGHGG  AA +V+ NL   ++    F  + +  +  ++ H D++F K+       +G+TA TA++ G  LL+AN GD RAV+ R G AI +S DH+P    E+ R+E
Sbjct:   70 SDIGGRQYMEDTHVCITDLAKNFGYQSVDNEAISFYGVFDGHGGKDAAHFVRDNLPRIIVEDADFPLELEKVVRRSFVHADNQFAKT----TLSSGTTALTAMIFGRTLLIANAGDCRAVLSRCGTAIEMSVDHRPCSLSEKLRVE 211          
The following BLAST results are available for this feature:
BLAST of CK932628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
P2C20_ARATH7.253e-2141.38Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]
P2C27_ORYSJ2.110e-2040.14Probable protein phosphatase 2C 27 OS=Oryza sativa... [more]
P2C22_ARATH2.110e-2040.67Probable protein phosphatase 2C 22 OS=Arabidopsis ... [more]
P2C57_ORYSJ3.600e-2039.58Probable protein phosphatase 2C 57 OS=Oryza sativa... [more]
P2C62_ORYSJ1.368e-1938.32Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]
P2C02_ARATH1.787e-1938.27Probable protein phosphatase 2C 2 OS=Arabidopsis t... [more]
P2C28_ARATH5.198e-1940.32Probable protein phosphatase 2C 28 OS=Arabidopsis ... [more]
P2C39_ARATH6.789e-1938.75Probable protein phosphatase 2C 39 OS=Arabidopsis ... [more]
P2C27_ARATH1.158e-1844.14Probable protein phosphatase 2C 27 OS=Arabidopsis ... [more]
P2C54_ORYSJ2.580e-1836.30Probable protein phosphatase 2C 54 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_F02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932628 ID=CK932628; Name=CK932628; organism=Citrus sinensis; type=EST; length=851bp
GAGGGGAATCACTATTGAATTCATCATCGTCGTCATAGTCTCTCTTTCTA
AAACTTCCTCTCTCGTCTTTTTCTTCTTTGTAACGCGTTTTAAACGCGCC
GTATCTTTTCTTTTATTTTCTTTTTCTCTGTTATGGCATTTCTTTTCACT
TCTCTTCTTCAGGTTGAGCTTGATAATTCGTGACATTGAAATGATCTAAC
GAATGTGCAATCACCTATTGTAACTAACCAAAACGCTGTCGCTGCTGTAG
TTATTGCTTTCGTTGTTATTAATTTATTTTCTCTTCCGAGTGGTTAACGA
ATTGGAACTTGAAGCGAAACCATGGGGTATTTGAACTCGGTGTTGTCATC
TTCAAGCCAGGTTCACGCCGATGATTCGCCGGCTAGCGGCGGGGGCCTTA
GTCAGAACGGAAAGTTCAGCTACGGATATGCGAGTTCTCCTGGCAAGAGG
TCTTCTATGGAAGATTTTTATGAGACCAGAATTGATGGCGTCGAAGGAGA
GATAGTAGGCCTCTTTGGAGTTTTTGATGGTCATGGGGGTGCACGGGCTG
CTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCATCCAAAG
TTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCACACAGA
CTCGGAATTTCCGAAGTCAGAAAACAATCAAAACAGGGATGCTGGATCTA
CTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCAAATGTG
GGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGCCGTATC
GCGAGATCACAAACCAGAACAAACAGATGAGCGTCAACGGATTGAGNNNN
N
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