CK932628

Overview
NameCK932628
Unique NameCK932628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: ILKAP_RAT (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.184e-17
Identity = 52/128 (40.62%), Postives = 73/128 (57.03%), Query Frame = 1
Query:  505 VGLFGVFDGHGGARAAEYVKHNLFSNLIR-HPK-----FISDTKSAIADAYSHTDSEFPKSENNQNR--DAGSTASTAILVGDRLLVANVGDSRAVICRGGN------AIAVSRDHKPEQTDERQRIE 846
            V  F VFDGHGG RA+++   NL  NLIR  PK          K  + D + HTD EF K  ++Q      GSTA+  + V + L +AN+GDSRA++CR         A+++S++H P Q +ER RI+
Sbjct:  145 VSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDVISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEERMRIQ 272          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1F_RAT (Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.865e-17
Identity = 40/111 (36.04%), Postives = 65/111 (58.56%), Query Frame = 1
Query:  514 FGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            F VFDGHGG  AA Y   ++ +N    P+ ++D  +A+ +A+ HTD  F +    +   +G+T   A++ G  L VA +GDS+ ++ + G  + +   HKPE+ DE+ RIE
Sbjct:  190 FAVFDGHGGVDAARYASVHVHTNASHQPELLTDPAAALKEAFRHTDQMFLQKAKRERLQSGTTGVCALITGAALHVAWLGDSQVILVQQGQVVKLMEPHKPERQDEKSRIE 300          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C32_ORYSJ (Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 8.299e-17
Identity = 55/146 (37.67%), Postives = 77/146 (52.74%), Query Frame = 1
Query:  445 KRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISD------------TKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            +R  MED +  ++       V  FGVFDGHGG  AAE+V  N+       PKF+++            T+ A+   Y  TD EF K E +     G+   TA+L    L+V+N GD RAV+ R G A A++ DH+  + DER+RIE
Sbjct:  141 RRVEMEDRHVAKVALGGDPKVAFFGVFDGHGGKSAAEFVAENM-------PKFMAEEMCKVDGGDSGETEQAVKRCYLKTDEEFLKREES----GGACCVTALLQKGGLVVSNAGDCRAVLSRAGKAEALTSDHRASREDERERIE 275          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1E_RAT (Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm1e PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  514 FGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            F VFDGHGG  AA Y   +L  NL+R   F  D   A+  A+  TD  F +    ++   G+T     + G+ L VA VGDS+ ++ R G A+ + + HKP++ DE+QRIE
Sbjct:  266 FAVFDGHGGVDAAIYASVHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIE 376          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1E_MOUSE (Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE=1 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  514 FGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            F VFDGHGG  AA Y   +L  NL+R   F  D   A+  A+  TD  F +    ++   G+T     + G+ L VA VGDS+ ++ R G A+ + + HKP++ DE+QRIE
Sbjct:  266 FAVFDGHGGVDAAIYASVHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIE 376          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1E_HUMAN (Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.154e-16
Identity = 44/111 (39.64%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  514 FGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            F VFDGHGG  AA Y   +L  NL+R   F  D   A+  A+  TD  F +    ++   G+T     + G+ L VA VGDS+ ++ R G A+ + + HKP++ DE+QRIE
Sbjct:  280 FAVFDGHGGVDAAIYASIHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIE 390          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PP2C3_PARTE (Probable protein phosphatase 2C 3 OS=Paramecium tetraurelia GN=GSPATT00031056001 PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.119e-16
Identity = 59/176 (33.52%), Postives = 88/176 (50.00%), Query Frame = 1
Query:  355 SQVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDT-KSAIADAYSHTDS-----EFPKSENNQNRD------AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            SQ   +    SG G S      +  +   G R++MED +  R D V+   V +FGVFDGHGG   A++V+ +    L+++  F     + A+ + +   D      E  K  NN          AG TA+ A++  + L VAN GDSR+V+CR      +S DHKP+  +E+ RIE
Sbjct:    6 SQPKREKVTTSGEGKS----VIFAASEMQGWRNTMEDAHIHRPDIVQD--VSVFGVFDGHGGREVAQFVEKHFIDELLKNKNFKEQKFEDALKETFLKMDELLMTPEGAKELNNYKATDTDESYAGCTANVALIHKNTLYVANAGDSRSVLCRNNTNFDMSVDHKPDNNEEKSRIE 175          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C20_ORYSJ (Probable protein phosphatase 2C 20 OS=Oryza sativa subsp. japonica GN=Os02g0600000 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.119e-16
Identity = 52/180 (28.89%), Postives = 80/180 (44.44%), Query Frame = 1
Query:  403 QNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTD--------------------------------SEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            +N +  Y  +S  G    MED +   ++ ++  +   FGV+DGHGGA  A Y        L  H  + S+  +A+  A+   D                                S FP++        GSTA   ++ GD+L+V + GDSR V+ R G A A+S DHKP+   ER+R++
Sbjct:   65 ENDRIKYVVSSMQGWGEKMEDAHAAILN-LDDTMTSFFGVYDGHGGAEVASYCAKRFHIELCNHEDYDSNLSNAMRSAFYSMDEDLQLSDAWRELVIPRNNGWMYFIKAGVCANLSPFPQATYTAPSYEGSTACVVVIRGDQLIVGHAGDSRCVLSRNGQASALSVDHKPDSESERERVQ 243          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C49_ARATH (Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.379e-16
Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 1
Query:  442 GKRSSMEDFYETRIDGVEGEIVGLF---------GVFDGHGGARAAEYVKHNLFSNLIRHPKF----------ISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            G + +MED +  RID +  ++  LF          VFDGHGG  AA YV+ N         +F          + + ++++ +A+   D    + + + +   G+TA TA++ G  L+VAN GD RAV+CR G AI +S DHKP    ER+R+E
Sbjct:   86 GPKRNMEDEH-IRIDDLSSQVGSLFELPKPSAFYAVFDGHGGPEAAAYVRENAIRFFFEDEQFPQTSEVSSVYVEEVETSLRNAFLQADLALAE-DCSISDSCGTTALTALICGRLLMVANAGDCRAVLCRKGRAIDMSEDHKPINLLERRRVE 237          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1F_HUMAN (Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE=1 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 7.025e-16
Identity = 39/111 (35.14%), Postives = 64/111 (57.66%), Query Frame = 1
Query:  514 FGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            F VFDGHGG  AA Y   ++ +N  R P+  +D + A+ +A+  TD  F +    +   +G+T   A++ G  L VA +GDS+ ++ + G  + +   H+PE+ DE+ RIE
Sbjct:  194 FAVFDGHGGVDAARYAAVHVHTNAARQPELPTDPEGALREAFRRTDQMFLRKAKRERLQSGTTGVCALIAGATLHVAWLGDSQVILVQQGQVVKLMEPHRPERQDEKARIE 304          
The following BLAST results are available for this feature:
BLAST of CK932628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
ILKAP_RAT2.184e-1740.63Integrin-linked kinase-associated serine/threonine... [more]
PPM1F_RAT4.865e-1736.04Protein phosphatase 1F OS=Rattus norvegicus GN=Ppm... [more]
P2C32_ORYSJ8.299e-1737.67Probable protein phosphatase 2C 32 OS=Oryza sativa... [more]
PPM1E_RAT3.154e-1639.64Protein phosphatase 1E OS=Rattus norvegicus GN=Ppm... [more]
PPM1E_MOUSE3.154e-1639.64Protein phosphatase 1E OS=Mus musculus GN=Ppm1e PE... [more]
PPM1E_HUMAN3.154e-1639.64Protein phosphatase 1E OS=Homo sapiens GN=PPM1E PE... [more]
PP2C3_PARTE4.119e-1633.52Probable protein phosphatase 2C 3 OS=Paramecium te... [more]
P2C20_ORYSJ4.119e-1628.89Probable protein phosphatase 2C 20 OS=Oryza sativa... [more]
P2C49_ARATH5.379e-1634.42Probable protein phosphatase 2C 49 OS=Arabidopsis ... [more]
PPM1F_HUMAN7.025e-1635.14Protein phosphatase 1F OS=Homo sapiens GN=PPM1F PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_F02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932628 ID=CK932628; Name=CK932628; organism=Citrus sinensis; type=EST; length=851bp
GAGGGGAATCACTATTGAATTCATCATCGTCGTCATAGTCTCTCTTTCTA
AAACTTCCTCTCTCGTCTTTTTCTTCTTTGTAACGCGTTTTAAACGCGCC
GTATCTTTTCTTTTATTTTCTTTTTCTCTGTTATGGCATTTCTTTTCACT
TCTCTTCTTCAGGTTGAGCTTGATAATTCGTGACATTGAAATGATCTAAC
GAATGTGCAATCACCTATTGTAACTAACCAAAACGCTGTCGCTGCTGTAG
TTATTGCTTTCGTTGTTATTAATTTATTTTCTCTTCCGAGTGGTTAACGA
ATTGGAACTTGAAGCGAAACCATGGGGTATTTGAACTCGGTGTTGTCATC
TTCAAGCCAGGTTCACGCCGATGATTCGCCGGCTAGCGGCGGGGGCCTTA
GTCAGAACGGAAAGTTCAGCTACGGATATGCGAGTTCTCCTGGCAAGAGG
TCTTCTATGGAAGATTTTTATGAGACCAGAATTGATGGCGTCGAAGGAGA
GATAGTAGGCCTCTTTGGAGTTTTTGATGGTCATGGGGGTGCACGGGCTG
CTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCATCCAAAG
TTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCACACAGA
CTCGGAATTTCCGAAGTCAGAAAACAATCAAAACAGGGATGCTGGATCTA
CTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCAAATGTG
GGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGCCGTATC
GCGAGATCACAAACCAGAACAAACAGATGAGCGTCAACGGATTGAGNNNN
N
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