CK932628

Overview
NameCK932628
Unique NameCK932628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C77_ORYSJ (Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.947e-15
Identity = 63/166 (37.95%), Postives = 84/166 (50.60%), Query Frame = 1
Query:  430 ASSPGKRSSMEDFYET----RIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLI----------RHPKFIS------------DTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVI-CRGGNAIAVSRDHKPEQTDERQRIE 846
            AS  G R +MED Y      +I+G  G  +  +GV+DGHGG  A ++V   L  N++          RH    S            D  +AI  AY  TDSEF     +Q    G+ A+TA++    L V+NVGD RAV+  RGG A A++ DH P + DER RIE
Sbjct:  141 ASRRGVRHAMEDGYGVITRHKIEG--GSQLAFYGVYDGHGGRAAVDFVADKLGKNVVTAAAAATTMSRHQAAGSSSPSQQRREEEDDVTAAIRAAYLTTDSEF----LSQGVRGGACAATALVKDGELYVSNVGDCRAVLGSRGGVATALTSDHTPGREDERLRIE 300          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PP2C3_YEAST (Protein phosphatase 2C homolog 3 OS=Saccharomyces cerevisiae GN=PTC3 PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 7.767e-15
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 1
Query:  418 SYGYASSPGKRSSMEDFYETR---IDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDT-KSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDR---LLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRI 843
            ++G  +  G R SMED +      +   + E +  +G+FDGHGG+  AE+    + S L +   F S   +  + D +  TD E  K E  ++  +G TA T ILV      L+ AN GDSR V+  GGN+ A+S DHKP    E+ RI
Sbjct:   23 AFGLCAMQGWRMSMEDAHIVEPNLLAESDEEHLAFYGIFDGHGGSSVAEFCGSKMISILKKQESFKSGMLEQCLIDTFLATDVELLKDEKLKDDHSGCTA-TVILVSQLKKLLICANSGDSRTVLSTGGNSKAMSFDHKPTLLSEKSRI 170          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C47_ORYSJ (Probable protein phosphatase 2C 47 OS=Oryza sativa subsp. japonica GN=Os05g0134200 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.767e-15
Identity = 52/153 (33.99%), Postives = 80/153 (52.29%), Query Frame = 1
Query:  442 GKRSSMEDFYETRIDGVEGEIVGL---------FGVFDGHGGARAAEYVKHNLFSNLIRHPKF----------ISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRI 843
            G R  MED +  RID +   +  L         +GVFDGHGG  AA Y+K +    L    +F          +   ++++  A+   D      + + +R +G+TA TA++ G +LLVAN GD RAV+CR G A+ +SRDH+    +E +R+
Sbjct:   84 GPRRYMEDEH-IRIDDLSAHLGSLLVCPLPSAFYGVFDGHGGLDAAAYMKRHAMRFLFEDSEFPQASQVDETYVQSVENSVRRAFLQADLALA-DDLDISRSSGTTALTALVFGRQLLVANAGDCRAVLCRRGVAMEMSRDHRANYAEECERV 234          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1F_MOUSE (Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.730e-14
Identity = 38/111 (34.23%), Postives = 63/111 (56.76%), Query Frame = 1
Query:  514 FGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            F VFDGHGG  AA Y   ++ +N    P+  ++  +A+ +A+  TD  F +    +   +G+T   A++ G  L VA +GDS+ ++ + G  + +   HKPE+ DE+ RIE
Sbjct:  191 FAVFDGHGGVDAARYASVHVHTNASHQPELRTNPAAALKEAFRLTDEMFLQKAKRERLQSGTTGVCALIAGAALHVAWLGDSQVILVQQGRVVKLMEPHKPERQDEKARIE 301          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C78_ARATH (Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.260e-14
Identity = 53/160 (33.12%), Postives = 79/160 (49.38%), Query Frame = 1
Query:  421 YGYASSPGKRSSMED------FYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENN---------QNRDA---GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            YG AS  G+R  MED      F+               GV+DGHG +  A   +  L   +    +  +D + ++A +++  D E      +         Q  D    GSTA  ++L  ++++VAN GDSRAV+CR G AIA+S DHKP++ DE  RI+
Sbjct:  112 YGVASVCGRRREMEDAVAVHPFFSRHQTEYSSTGFHYCGVYDGHGCSHVAMKCRERLHELVREEFEADADWEKSMARSFTRMDMEVVALNADGAAKCRCELQRPDCDAVGSTAVVSVLTPEKIIVANCGDSRAVLCRNGKAIALSSDHKPDRPDELDRIQ 271          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PP2C6_PARTE (Probable protein phosphatase 2C 6 OS=Paramecium tetraurelia GN=GSPATT00019634001 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14
Identity = 52/160 (32.50%), Postives = 84/160 (52.50%), Query Frame = 1
Query:  403 QNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDT-KSAIADAYSHTDSEFPK----SENNQNRD-------AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            QN    Y      G R++MED + + ++ +E + V LF VFDGHGG+  A + + +    L+++  +     + A+ + +   D    +     E N+ R        AG TA+ A++VG  L VAN GDSR+ + R G    +S+DHKP+   E++RIE
Sbjct:   18 QNQVLQYAATHMQGWRNTMEDAHISDLN-IEPD-VHLFAVFDGHGGSEVAIFAERHFREELMKNKNYQQKNYEKALTETFFKIDKMLQEPSGLDELNKIRGVTDEASLAGCTANVALIVGKTLYVANAGDSRSFLNRDGKPFDMSKDHKPDDEQEKKRIE 175          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C51_ORYSJ (Probable protein phosphatase 2C 51 OS=Oryza sativa subsp. japonica GN=Os05g0572700 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14
Identity = 70/219 (31.96%), Postives = 100/219 (45.66%), Query Frame = 1
Query:  298 RIGT*SETMGYLNSVLSSSSQVHADDSPASGGGLSQNGKFSYGYASSPGKRSSMED-------FYETRIDGV-------EGEIVGLFGVFDGHGGARAAEYVKHNLFSNL-----IRHPKFISDT------KSAIADAYSHTDSEFPKS-----------ENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            R+G  +E       + S      +DDS       S     S+G  S  G+R  MED       F  +  DG        EGE    F V+DGHGG+R AE  +  +   L     +R  +  S +      K A+  +++  D E   S           E +  R  GSTA  A++   R++VAN GDSRAV+ RGG A+ +S DHKP++ DE +R+E
Sbjct:   37 RLGLAAEDDAAAKRIRSVKDGSSSDDSSTEVVPRSWPACVSHGSVSVIGRRREMEDAVAIERTFMASTGDGAGAIRGGGEGE-EDFFAVYDGHGGSRVAEACRKRMHVVLAEEVSLRRLRGQSASGGDVRWKEAMLASFARMDGEVVGSVAAAAPRVDGTEPSGFRTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVE 254          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C50_ORYSJ (Probable protein phosphatase 2C 50 OS=Oryza sativa subsp. japonica GN=Os05g0537400 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14
Identity = 50/138 (36.23%), Postives = 64/138 (46.38%), Query Frame = 1
Query:  511 LFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIA--DAYSHTDSEFPK------------------------SENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            LFGVFDGHGGA  A Y +  +   L    K +      +   D   H D  F K                        SE     + GSTA  A++    ++VAN GDSR V+CRG   +A+S DHKP++ DER RIE
Sbjct:  113 LFGVFDGHGGAEVANYCRERIHVVLSEELKRLGKNLGEMGEVDMKEHWDDVFTKCFQRVDDEVSGRVTRVVNGGGEVRSEPVTAENVGSTAVVALVCSSHVVVANCGDSRIVLCRGKEPVALSIDHKPDRKDERARIE 250          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C31_ARATH (Protein kinase and PP2C-like domain-containing protein OS=Arabidopsis thaliana GN=At2g40860/At2g40870 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14
Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = 1
Query:  418 SYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEY---VKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDA----------GSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRI 843
            S G  ++ G+R SMED +         E + LF +FDGH GA AAE+   V   L  +L       +    A++ A+  TD  F + E + +R +          G TA  ++LV ++L VANVGDSRA++CR G+  A+S+ H     DER R+
Sbjct:  392 SCGSFATCGRRESMEDTHFIIPHMCNEESIHLFAIFDGHRGAAAAEFSAQVLPGLVQSLCS-----TSAGEALSQAFVRTDLAF-RQELDSHRQSKRVSQKDWHPGCTAIASLLVENKLFVANVGDSRAILCRAGHPFALSKAHLATCIDERNRV 540          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C68_ORYSJ (Probable protein phosphatase 2C 68 OS=Oryza sativa subsp. japonica GN=Os09g0325700 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 3.855e-14
Identity = 64/183 (34.97%), Postives = 88/183 (48.09%), Query Frame = 1
Query:  382 ASGG--GLSQNGKFSYGYASSPGKRSSMEDFYETR---IDGVEGEIVG----LFGVFDGHGGARAAEYVK---HNLFSNLI---------RHPKFISDTKS-------AIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            ASGG  GL    K  +G AS  G+R  MED    R        GE+       +GVFDGHG +  A+  +   H L +  +         R P   ++T         A   A    +S   + E  +    GSTA  A++   R++VAN GDSRAV+CRGG  + +S DHKP++ DE +RIE
Sbjct:   61 ASGGEAGLVVVAK-RHGAASVAGRRREMEDAVSLREAFAAPANGEVAAARCDFYGVFDGHGCSHVADACRERMHELVAEEMGAGSPAAAAREPASWTETMERSFARMDAEVIAGCRAESGSCRCEGQKCDHVGSTAVVAVVEESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIE 242          
The following BLAST results are available for this feature:
BLAST of CK932628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
P2C77_ORYSJ5.947e-1537.95Probable protein phosphatase 2C 77 OS=Oryza sativa... [more]
PP2C3_YEAST7.767e-1536.24Protein phosphatase 2C homolog 3 OS=Saccharomyces ... [more]
P2C47_ORYSJ7.767e-1533.99Probable protein phosphatase 2C 47 OS=Oryza sativa... [more]
PPM1F_MOUSE1.730e-1434.23Protein phosphatase 1F OS=Mus musculus GN=Ppm1f PE... [more]
P2C78_ARATH2.260e-1433.13Probable protein phosphatase 2C 78 OS=Arabidopsis ... [more]
PP2C6_PARTE2.952e-1432.50Probable protein phosphatase 2C 6 OS=Paramecium te... [more]
P2C51_ORYSJ2.952e-1431.96Probable protein phosphatase 2C 51 OS=Oryza sativa... [more]
P2C50_ORYSJ2.952e-1436.23Probable protein phosphatase 2C 50 OS=Oryza sativa... [more]
P2C31_ARATH2.952e-1435.48Protein kinase and PP2C-like domain-containing pro... [more]
P2C68_ORYSJ3.855e-1434.97Probable protein phosphatase 2C 68 OS=Oryza sativa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004531_F02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932628 ID=CK932628; Name=CK932628; organism=Citrus sinensis; type=EST; length=851bp
GAGGGGAATCACTATTGAATTCATCATCGTCGTCATAGTCTCTCTTTCTA
AAACTTCCTCTCTCGTCTTTTTCTTCTTTGTAACGCGTTTTAAACGCGCC
GTATCTTTTCTTTTATTTTCTTTTTCTCTGTTATGGCATTTCTTTTCACT
TCTCTTCTTCAGGTTGAGCTTGATAATTCGTGACATTGAAATGATCTAAC
GAATGTGCAATCACCTATTGTAACTAACCAAAACGCTGTCGCTGCTGTAG
TTATTGCTTTCGTTGTTATTAATTTATTTTCTCTTCCGAGTGGTTAACGA
ATTGGAACTTGAAGCGAAACCATGGGGTATTTGAACTCGGTGTTGTCATC
TTCAAGCCAGGTTCACGCCGATGATTCGCCGGCTAGCGGCGGGGGCCTTA
GTCAGAACGGAAAGTTCAGCTACGGATATGCGAGTTCTCCTGGCAAGAGG
TCTTCTATGGAAGATTTTTATGAGACCAGAATTGATGGCGTCGAAGGAGA
GATAGTAGGCCTCTTTGGAGTTTTTGATGGTCATGGGGGTGCACGGGCTG
CTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCATCCAAAG
TTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCACACAGA
CTCGGAATTTCCGAAGTCAGAAAACAATCAAAACAGGGATGCTGGATCTA
CTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCAAATGTG
GGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGCCGTATC
GCGAGATCACAAACCAGAACAAACAGATGAGCGTCAACGGATTGAGNNNN
N
back to top