CK932628

Overview
NameCK932628
Unique NameCK932628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length851
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C24_ARATH (Probable protein phosphatase 2C 24 OS=Arabidopsis thaliana GN=At2g29380 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.155e-12
Identity = 52/168 (30.95%), Postives = 79/168 (47.02%), Query Frame = 1
Query:  421 YGYASSPGKRSSMED---FYETRIDGVEGEIVG-LFGVFDGHGGARAA--------EYVKHNLFSNL--------------IRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            YG +S  G+R  MED    + +       E     FGV+DGHG +  A        + V+  L S++               R  K +     ++  A    D + P  ++      GSTA  +++  D+++VAN GDSRAV+CR G  + +S DHKP++ DE  RIE
Sbjct:   78 YGVSSVCGRRREMEDAVAIHPSFSSPKNSEFPQHYFGVYDGHGCSHVAARCRERLHKLVQEELSSDMEDEEEWKTTMERSFTRMDKEVVSWGDSVVTANCKCDLQTPACDS-----VGSTAVVSVITPDKIVVANCGDSRAVLCRNGKPVPLSTDHKPDRPDELDRIE 240          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C17_ORYSJ (Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica GN=Os02g0599150 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 8.038e-12
Identity = 50/181 (27.62%), Postives = 78/181 (43.09%), Query Frame = 1
Query:  403 QNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSE------------------------------FPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICR-GGNAIAVSRDHKP--EQTDERQRIE 846
            +N +  Y  +S  G    MED +   ++  +      FGV+DGHGGA  A Y        L  H  + +D  +A+ + +   D                                FP++        GSTA   ++ G++++V +VGDSR V+ R GG AI +S DHKP      ER+R++
Sbjct:   40 ENDRIKYVVSSMQGWGEKMEDAHAAILNLDDTTSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYHNDLINALDNVFLSMDENLQQSDAWRELVIPHDNGCMYFLKAGVCAKPFPQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQ 220          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1B_RAT (Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 48/159 (30.19%), Postives = 72/159 (45.28%), Query Frame = 1
Query:  421 YGYASSPGKRSSMEDFYETRIDGVEG-EIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF-------------ISDTKSAIADAYSHTDS---EFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            YG +S  G R  MED +   +    G E    F V+DGH G+R A Y   +L  ++  +  F             + + K+ I   +   D     F    N  +R +GSTA   ++    +   N GDSRAV+CR G     ++DHKP    E++RI+
Sbjct:   24 YGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGFALEPSVENVKTGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMISPTHIYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQ 181          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: P2C37_ARATH (Protein phosphatase 2C 37 OS=Arabidopsis thaliana GN=PP2CA PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.371e-11
Identity = 49/166 (29.52%), Postives = 78/166 (46.99%), Query Frame = 1
Query:  424 GYASSPGKRSSMEDFYETRIDGVE--GEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTK--SAIADAYSHTDSEFPKSENN---------------------QNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            G  S  G+R  MED        ++   E    +GVFDGHG +  AE  +  L   + +  + ++  +    +  ++   D E  + E N                     Q    GSTA  +++  ++++V+N GDSRAV+CR G AI +S DHKP++ DE  RI+
Sbjct:  106 GTTSVCGRRRDMEDAVSIHPSFLQRNSENHHFYGVFDGHGCSHVAEKCRERLHDIVKKEVEVMASDEWTETMVKSFQKMDKEVSQRECNLVVNGATRSMKNSCRCELQSPQCDAVGSTAVVSVVTPEKIIVSNCGDSRAVLCRNGVAIPLSVDHKPDRPDELIRIQ 271          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.791e-11
Identity = 43/147 (29.25%), Postives = 68/147 (46.26%), Query Frame = 1
Query:  406 NGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFIS-DTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRI 843
            N  +  G +   G R  MED +   +   +      F V+DGHGG++ ++Y   NL   ++   +F   + K AI   +   D +    E  ++  +G+TA   ++    +   N GDSRAV    G A  +S DHKP    E +RI
Sbjct:   19 NENYLVGSSCMQGWRVDMEDAHTHLLSLPDDPKCAFFAVYDGHGGSKVSQYSGINLHKKVVAQKEFSEGNMKEAIEKGFLELDQQMRVDEETKDDVSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRI 165          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPMBL_HUMAN (Probable protein phosphatase 1B-like OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.989e-11
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 1
Query:  391 GGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVG--LFGVFDGHGGARAAEYVKHNLFSNLIRH----PKFISDTKSAIADAYSHTD----SEFPKSENNQNRDAGSTASTAILVGDRLL-VANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRI 843
            GG   +G   +G +++ G R+ MED + T +  + G   G  LF V DGHGGARAA +   +L  ++++     P      + A+  A+   D    S +P+ E       G   +  +LV  R L +A+ GDSRAV+ R G     + DH+P +  ER+RI
Sbjct:   57 GGAEASGGLRFGASAAQGWRARMEDAHCTWLS-LPGLPPGWALFAVLDGHGGARAARFGARHLPGHVLQELGPEPSEPEGVREALRRAFLSADERLRSLWPRVET------GGCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERI 211          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPMBL_MOUSE (Probable protein phosphatase 1B-like OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  394 GLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVG--LFGVFDGHGGARAAEYVKHNL----FSNLIRHPKFISDTKSAIADAYSHTDSEFPKSENNQNRDAGSTASTAILVGDRLL-VANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRI 843
            G +      +G ++  G R+ MED +  R+  + G   G   F V DGHGGARAA +   +L       L   P+     + A+  A+   D++   S      D G + + A+LV  R L +A+ GDSRA++ R G+    + DH+P +  ER+RI
Sbjct:   51 GAAATSGLRFGASAVQGWRARMEDAHCARL-ALPGLPSGWAFFAVLDGHGGARAARFGARHLPGYVLGELGPAPQEPDGVRQALRSAFLQADAQL--SALWPRGDPGGSTAVALLVSPRFLYLAHCGDSRALLSRSGSVAFCTEDHRPHRPRERERI 204          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 47/159 (29.56%), Postives = 71/159 (44.65%), Query Frame = 1
Query:  421 YGYASSPGKRSSMEDFYETRIDGVEG-EIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF-------------ISDTKSAIADAYSHTDS---EFPKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            YG +S  G R  MED +   +    G +    F V+DGH G+R A Y   +L  ++  +  F             +   K+ I   +   D     F    N  +R +GSTA   ++    +   N GDSRAV+CR G     ++DHKP    E++RI+
Sbjct:   24 YGLSSMQGWRVEMEDAHTAVVGIPHGLDNWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGSALEPSVESVKTGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQ 181          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1A_BOVIN (Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11
Identity = 46/159 (28.93%), Postives = 70/159 (44.03%), Query Frame = 1
Query:  403 QNGKFSYGYASSPGKRSSMEDFYETRIDGVEG-EIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF--------ISDTKSAIADAYSHTDSEFP-KSENNQNRD-AGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            Q     YG +S  G R  MED +   I    G E    F V+DGH G++ A+Y   +L  ++  +  F        + + K+ I   +   D      SE     D +GSTA   ++        N GDSR ++CR       ++DHKP    E++RI+
Sbjct:   18 QGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLETWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQ 176          
BLAST of CK932628 vs. ExPASy Swiss-Prot
Match: PPM1K_XENLA (Protein phosphatase 1K, mitochondrial OS=Xenopus laevis GN=ppm1k PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11
Identity = 47/146 (32.19%), Postives = 78/146 (53.42%), Query Frame = 1
Query:  424 GYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFPK----SENNQNRDAGSTASTAILV-GDRLLVANVGDSRAVICRGGNAIAVSRDHKPEQTDERQRIE 846
            G ++  GKR   ED +  ++  +  +I+  F V+DGHGGA AAE+    +   +        D +  +  A+   +  F +    S +      G+TA+ A+L  G  L+VA+VGDSRA++CR G    ++ DH PE+ +E+ RI+
Sbjct:   97 GCSTQLGKRKENEDRF--KLARLTPDIL-YFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVKAFLEINKAFARHAHLSVDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIK 239          
The following BLAST results are available for this feature:
BLAST of CK932628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
P2C24_ARATH6.155e-1230.95Probable protein phosphatase 2C 24 OS=Arabidopsis ... [more]
P2C17_ORYSJ8.038e-1227.62Probable protein phosphatase 2C 17 OS=Oryza sativa... [more]
PPM1B_RAT1.371e-1130.19Protein phosphatase 1B OS=Rattus norvegicus GN=Ppm... [more]
P2C37_ARATH1.371e-1129.52Protein phosphatase 2C 37 OS=Arabidopsis thaliana ... [more]
PP2C2_CAEEL1.791e-1129.25Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
PPMBL_HUMAN3.989e-1132.72Probable protein phosphatase 1B-like OS=Homo sapie... [more]
PPMBL_MOUSE5.210e-1131.85Probable protein phosphatase 1B-like OS=Mus muscul... [more]
PPM1B_MOUSE5.210e-1129.56Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PPM1A_BOVIN5.210e-1128.93Protein phosphatase 1A OS=Bos taurus GN=PPM1A PE=2... [more]
PPM1K_XENLA6.805e-1132.19Protein phosphatase 1K, mitochondrial OS=Xenopus l... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_F02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932628 ID=CK932628; Name=CK932628; organism=Citrus sinensis; type=EST; length=851bp
GAGGGGAATCACTATTGAATTCATCATCGTCGTCATAGTCTCTCTTTCTA
AAACTTCCTCTCTCGTCTTTTTCTTCTTTGTAACGCGTTTTAAACGCGCC
GTATCTTTTCTTTTATTTTCTTTTTCTCTGTTATGGCATTTCTTTTCACT
TCTCTTCTTCAGGTTGAGCTTGATAATTCGTGACATTGAAATGATCTAAC
GAATGTGCAATCACCTATTGTAACTAACCAAAACGCTGTCGCTGCTGTAG
TTATTGCTTTCGTTGTTATTAATTTATTTTCTCTTCCGAGTGGTTAACGA
ATTGGAACTTGAAGCGAAACCATGGGGTATTTGAACTCGGTGTTGTCATC
TTCAAGCCAGGTTCACGCCGATGATTCGCCGGCTAGCGGCGGGGGCCTTA
GTCAGAACGGAAAGTTCAGCTACGGATATGCGAGTTCTCCTGGCAAGAGG
TCTTCTATGGAAGATTTTTATGAGACCAGAATTGATGGCGTCGAAGGAGA
GATAGTAGGCCTCTTTGGAGTTTTTGATGGTCATGGGGGTGCACGGGCTG
CTGAGTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCATCCAAAG
TTCATATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCACACAGA
CTCGGAATTTCCGAAGTCAGAAAACAATCAAAACAGGGATGCTGGATCTA
CTGCTTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCAAATGTG
GGTGACTCCAGAGCTGTTATATGCAGGGGCGGTAATGCTATTGCCGTATC
GCGAGATCACAAACCAGAACAAACAGATGAGCGTCAACGGATTGAGNNNN
N
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