CK932640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB2A_MAIZE (Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.735e-41 Identity = 83/164 (50.61%), Postives = 108/164 (65.85%), Query Frame = 3 Query: 171 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 662 YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+ K +K QIWDTAGQE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + H++ N+ +LVGNK DL R V+ EG+ A+ GL FME SA + NV AF IY Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIY 168
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: SEC4_YEAST (Ras-related protein SEC4 OS=Saccharomyces cerevisiae GN=SEC4 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.141e-40 Identity = 84/194 (43.30%), Postives = 129/194 (66.49%), Query Frame = 3 Query: 147 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFN 728 S ++ D + K++LIGDS VGKS LL RF D+F P+ +TIG++F+ + +DINGK+VK Q+WDTAGQERFR +T+AYYRGA+G +LVYD++ +TF +I +W ++ H++ +LVGNKSD+ + R VT +G+ALA+ G+ F+E+SA + NV F T+ I + ++ ++ + S N Sbjct: 11 SGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDSNKLVGVGNGKEGNISIN 203
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1A_RAT (Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 1.141e-40 Identity = 80/164 (48.78%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ +++F+++ +WL E+ ++ NV +LVGNK DL + V K A++ G+ F+ETSA +++NV +F T+ EI Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1A_MOUSE (Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 1.141e-40 Identity = 80/164 (48.78%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ +++F+++ +WL E+ ++ NV +LVGNK DL + V K A++ G+ F+ETSA +++NV +F T+ EI Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1A_HUMAN (Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 1.141e-40 Identity = 80/164 (48.78%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ +++F+++ +WL E+ ++ NV +LVGNK DL + V K A++ G+ F+ETSA +++NV +F T+ EI Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1A_CANFA (Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 1.141e-40 Identity = 80/164 (48.78%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ +++F+++ +WL E+ ++ NV +LVGNK DL + V K A++ G+ F+ETSA +++NV +F T+ EI Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: YPT1_SCHPO (GTP-binding protein ypt1 OS=Schizosaccharomyces pombe GN=ypt1 PE=1 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 1.490e-40 Identity = 84/179 (46.93%), Postives = 120/179 (67.04%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELK 704 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++ GK VK QIWDTAGQERFR +TS+YYRGA G ++VYD++ + +F+++ +WL E+ ++ V +LVGNKSD+ D + V + K A++ + F+ETSA DS+NV AF T+ +I + S K Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASSNAK 184
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB2B_MAIZE (Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.490e-40 Identity = 83/164 (50.61%), Postives = 107/164 (65.24%), Query Frame = 3 Query: 171 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 662 YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+ K +K QIWDTAGQE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + H++ N+ +LVGNK DL R V+ EG+ A+ GL FME SA + NV AF IY Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIY 168
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1C_HUMAN (Putative Ras-related protein Rab-1C OS=Homo sapiens GN=RAB1C PE=5 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.946e-40 Identity = 82/164 (50.00%), Postives = 117/164 (71.34%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 D LFK++LIGDS VGKS LL RFA D + + STIGV+F+ Q ++++GK +K QIWDTAGQERF +TS+YYRGA G L+VYD++ ++++ ++ +WL E+ H+ NV +LVGNKSDL + V K A++ G+ F+ETSA +++NV AF T+ EI Sbjct: 6 DCLFKLLLIGDSGVGKSCLLLRFADDPYTESYISTIGVDFKIQTIELDGKTIKLQIWDTAGQERFWTITSSYYRGAHGFLVVYDVTDQESYANVKQWLQEIDRHASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: YPTV2_VOLCA (GTP-binding protein yptV2 OS=Volvox carteri GN=YPTV2 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 2.541e-40 Identity = 89/186 (47.85%), Postives = 124/186 (66.67%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDL-KDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSS 722 D L K++L+GDS VGKS LL RF D F + +TIG++F+ +K+D++GK VK QIWDTAGQERFR +TSAYYRGA G +LVYDI+ +F+++ W+ + H+ NV ILVGNK DL +D R V+ A G+ALA+ G F ETSA D+ +V AF V ++ + + Q L+Q+ S+ Sbjct: 11 DALIKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVDGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDITDEASFNNVRNWMRNIEQHASDNVNKILVGNKLDLAEDKRVVSIARGQALADEFGFRFYETSAKDNVHVEEAFIAVAKDVLARMEGEHANQQLLQQQQLSA 196 The following BLAST results are available for this feature:
BLAST of CK932640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932640 ID=CK932640; Name=CK932640; organism=Citrus sinensis; type=EST; length=883bpback to top |