CK932640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB4A_BOVIN (Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=2) HSP 1 Score: 163.696 bits (413), Expect = 1.261e-39 Identity = 83/166 (50.00%), Postives = 110/166 (66.27%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYN 665 D+LFK ++IG++ GKS LL +F +F +S TIGVEF ++ +++ GK VK QIWDTAGQERFR+VT +YYRGA GALLVYDI+ R+T++++ WL + + N+V IL GNK DL REVT E A+ L F+ETSAL NV AF +I N Sbjct: 6 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILN 171
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB4A_HUMAN (Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=2) HSP 1 Score: 163.31 bits (412), Expect = 1.647e-39 Identity = 83/166 (50.00%), Postives = 110/166 (66.27%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYN 665 D+LFK ++IG++ GKS LL +F +F +S TIGVEF ++ +++ GK VK QIWDTAGQERFR+VT +YYRGA GALLVYDI+ R+T++++ WL + + N+V IL GNK DL REVT E A+ L F+ETSAL NV AF +I N Sbjct: 6 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILN 171
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.647e-39 Identity = 83/193 (43.01%), Postives = 129/193 (66.84%), Query Frame = 3 Query: 156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFNGK 734 D+ DY+FK++LIG+S+VGK++ L R+A D F P ST+G++F+ + + + K +K QIWDTAGQER+R +T+AYYRGA+G LL+YDI+ +++F ++ W ++ T+S N ILVGNK DL+D R V +G+ LA+ G F E SA ++ NV F+ +V +++ K +++ L+ SS NGK Sbjct: 16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLV----DVICEK--MNESLEPSSSSGSNGK 202
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1D_DICDI (Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.647e-39 Identity = 79/169 (46.75%), Postives = 121/169 (71.60%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILS 674 D+ FK++LIGDS VGKS LL RFA D + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G +LVYD + + +F ++ +W+ E+ ++ NV +LVGNK+DL + + V + + K+ AE+ G+ F+ETSA +++NV F ++ +I N L+ Sbjct: 8 DFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNKLLVGNKTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDIKNRLA 176
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB13_HUMAN (Ras-related protein Rab-13 OS=Homo sapiens GN=RAB13 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.647e-39 Identity = 77/167 (46.11%), Postives = 115/167 (68.86%), Query Frame = 3 Query: 159 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + +DI GK++K Q+WDTAGQERF+ +T+AYYRGA+G +LVYDI+ ++F++I W+ + ++ V +L+GNK D++ R+V + LA G+ F ETSA S NV AF ++ +I Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB13_BOVIN (Ras-related protein Rab-13 OS=Bos taurus GN=RAB13 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.647e-39 Identity = 77/167 (46.11%), Postives = 115/167 (68.86%), Query Frame = 3 Query: 159 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + +DI GK++K Q+WDTAGQERF+ +T+AYYRGA+G +LVYDI+ ++F++I W+ + ++ V +L+GNK D++ R+V + LA G+ F ETSA S NV AF ++ +I Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI 169
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB4A_MOUSE (Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.151e-39 Identity = 82/166 (49.40%), Postives = 110/166 (66.27%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYN 665 D+LFK ++IG++ GKS LL +F +F +S TIG+EF ++ +++ GK VK QIWDTAGQERFR+VT +YYRGA GALLVYDI+ R+T++++ WL + + N+V IL GNK DL REVT E A+ L F+ETSAL NV AF +I N Sbjct: 6 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILN 171
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1B_DICDI (Ras-related protein Rab-1B OS=Dictyostelium discoideum GN=rab1B PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 2.151e-39 Identity = 79/164 (48.17%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ +F+++ +W+ E+ ++ +V +LVGNK DL + + V T+ + A++ G+ F+ETSA S+NV AF + +EI Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYACDSVTRLLVGNKCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAFMIMASEI 169
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 82/193 (42.49%), Postives = 126/193 (65.28%), Query Frame = 3 Query: 156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFNGK 734 D+ DY+FK++LIG+S+VGK++ L R+A D F P ST+G++F+ + + + K +K QIWDTAGQER+R +T+AYYRGA+G LL+YDI+ +++F ++ W ++ T+S N ILVGNK DL+D R V +G+ LA+ G F E SA ++ NV F+ +V I + +++ L+ S NGK Sbjct: 16 DQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICD------KMNESLEPSSSPGSNGK 202
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3C_HUMAN (Ras-related protein Rab-3C OS=Homo sapiens GN=RAB3C PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 79/185 (42.70%), Postives = 125/185 (67.57%), Query Frame = 3 Query: 138 AFYSEEDRAE---DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 A Y ++D ++ DY+FK+++IG+S+VGK++ L R+A D F ST+G++F+ + + N K +K QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F+++ W ++ T+S N ILVGNK D++D R ++T G+ L E G F ETSA D+ NV F+ +V I + +S + Sbjct: 15 ARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199 The following BLAST results are available for this feature:
BLAST of CK932640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932640 ID=CK932640; Name=CK932640; organism=Citrus sinensis; type=EST; length=883bpback to top |