CK932640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 79/185 (42.70%), Postives = 125/185 (67.57%), Query Frame = 3 Query: 138 AFYSEEDRAE---DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 A Y ++D ++ DY+FK+++IG+S+VGK++ L R+A D F ST+G++F+ + + N K +K QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F+++ W ++ T+S N ILVGNK D++D R ++T G+ L E G F ETSA D+ NV F+ +V I + +S + Sbjct: 15 ARYGQKDSSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3A_RAT (Ras-related protein Rab-3A OS=Rattus norvegicus GN=Rab3a PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 76/176 (43.18%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 D+ DY+FK+++IG+S+VGK++ L R+A D F P ST+G++F+ + + N K +K QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F+++ W ++ T+S N +LVGNK D++D R V++ G+ LA+ G F E SA D+ NV F+ +V I +S + Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3A_PIG (Ras-related protein Rab-3A OS=Sus scrofa GN=RAB3A PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 76/176 (43.18%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 D+ DY+FK+++IG+S+VGK++ L R+A D F P ST+G++F+ + + N K +K QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F+++ W ++ T+S N +LVGNK D++D R V++ G+ LA+ G F E SA D+ NV F+ +V I +S + Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3A_MOUSE (Ras-related protein Rab-3A OS=Mus musculus GN=Rab3a PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 76/176 (43.18%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 D+ DY+FK+++IG+S+VGK++ L R+A D F P ST+G++F+ + + N K +K QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F+++ W ++ T+S N +LVGNK D++D R V++ G+ LA+ G F E SA D+ NV F+ +V I +S + Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3A_MACFA (Ras-related protein Rab-3A OS=Macaca fascicularis GN=RAB3A PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 76/176 (43.18%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 D+ DY+FK+++IG+S+VGK++ L R+A D F P ST+G++F+ + + N K +K QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F+++ W ++ T+S N +LVGNK D++D R V++ G+ LA+ G F E SA D+ NV F+ +V I +S + Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3A_HUMAN (Ras-related protein Rab-3A OS=Homo sapiens GN=RAB3A PE=1 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 76/176 (43.18%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 D+ DY+FK+++IG+S+VGK++ L R+A D F P ST+G++F+ + + N K +K QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F+++ W ++ T+S N +LVGNK D++D R V++ G+ LA+ G F E SA D+ NV F+ +V I +S + Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB3A_BOVIN (Ras-related protein Rab-3A OS=Bos taurus GN=RAB3A PE=1 SV=3) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 76/176 (43.18%), Postives = 120/176 (68.18%), Query Frame = 3 Query: 156 DRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 D+ DY+FK+++IG+S+VGK++ L R+A D F P ST+G++F+ + + N K +K QIWDTAGQER+R +T+AYYRGA+G +L+YDI+ ++F+++ W ++ T+S N +LVGNK D++D R V++ G+ LA+ G F E SA D+ NV F+ +V I +S + Sbjct: 16 DQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB13_MESAU (Ras-related protein Rab-13 OS=Mesocricetus auratus GN=RAB13 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 76/167 (45.51%), Postives = 114/167 (68.26%), Query Frame = 3 Query: 159 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + ++I GK +K Q+WDTAGQERF+ +T+AYYRGA+G +LVYDI+ ++F++I W+ + ++ V +L+GNK D++ R+V + LA G+ F ETSA S NV AF ++ +I Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRKVLKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDI 169
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB10_CHICK (Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 6.260e-39 Identity = 82/191 (42.93%), Postives = 126/191 (65.97%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQK-DSSSFNGKT 737 D LFK++LIGDS VGK+ +L RF+ D F STIG++ + + +++ GK++K QIWDTAGQERF +T++YYRGA+G +LVYDI+ ++F++I +WL + H++ +V +L+GNK D++D R V A+G+ +A G+ F ETSA + N+ AF T+ +I RK + + + D SS G T Sbjct: 7 DLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL----RKTPVKEPNSENVDISSGGGVT 193
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB13_MOUSE (Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 8.176e-39 Identity = 76/167 (45.51%), Postives = 114/167 (68.26%), Query Frame = 3 Query: 159 RAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 +A D+LFK++LIGDS VGK+ L+ RFA D F STIG++F+ + +DI GK +K Q+WDTAGQERF+ +T+AYYRGA+G +LVYDI+ ++F++I W+ + ++ V +L+GNK D++ R+V + + LA + F ETSA S NV AF ++ +I Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLGNKCDMEAKRQVQREQAEKLAREHRIRFFETSAKSSVNVDEAFSSLARDI 169 The following BLAST results are available for this feature:
BLAST of CK932640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932640 ID=CK932640; Name=CK932640; organism=Citrus sinensis; type=EST; length=883bpback to top |