CK932640

Overview
NameCK932640
Unique NameCK932640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAYL_HUMAN (Putative GTP-binding protein RAY-like OS=Homo sapiens GN=RABL4 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 54/179 (30.17%), Postives = 92/179 (51.40%), Query Frame = 3
Query:  180 KVVLIGDSAVGKSNLLARFARD--EFYPNSKSTIGVEFQTQKMDI--NGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSD-MNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQEL 701
            K +L GD AVGK+ L   F  D   F  +   T G++   + + +   G  V+  I+D+AG+E F  +    +       LVYD++  ++F++  +WL +  + +  +++  +LVGNK+DL   R V +AE +A A  QGL   ETS  +  N  A F  +  + + +   KV + + L
Sbjct:    7 KCILAGDPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNCSKWLEKARSQAPGISLPGVLVGNKTDLAGRRAVDSAEARAWALGQGLECFETSVKEMENFEAPFHCLAKQFHQLYREKVEVFRAL 185          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RASN_PIG (GTPase NRas OS=Sus scrofa GN=NRAS PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = 3
Query:  177 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDM-NVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQE 698
            +K+V++G   VGKS L  +  ++ F      TI   ++ Q + I+G+     I DTAGQE + A+   Y R   G L V+ I+  ++F  I  +  ++    D  +V  +LVGNK DL   R V T +   LA++ G+ F+ETSA     V  AF T+V EI     +K+  S +
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDL-PTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDD 176          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RASN_MONDO (GTPase NRas OS=Monodelphis domestica GN=NRAS PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = 3
Query:  177 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDM-NVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQE 698
            +K+V++G   VGKS L  +  ++ F      TI   ++ Q + I+G+     I DTAGQE + A+   Y R   G L V+ I+  ++F  I  +  ++    D  +V  +LVGNK DL   R V T +   LA++ G+ F+ETSA     V  AF T+V EI     +K+  S +
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDL-PTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDD 176          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RASN_HUMAN (GTPase NRas OS=Homo sapiens GN=NRAS PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 59/175 (33.71%), Postives = 91/175 (52.00%), Query Frame = 3
Query:  177 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDM-NVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQE 698
            +K+V++G   VGKS L  +  ++ F      TI   ++ Q + I+G+     I DTAGQE + A+   Y R   G L V+ I+  ++F  I  +  ++    D  +V  +LVGNK DL   R V T +   LA++ G+ F+ETSA     V  AF T+V EI     +K+  S +
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNSKSFADINLYREQIKRVKDSDDVPMVLVGNKCDL-PTRTVDTKQAHELAKSYGIPFIETSAKTRQGVEDAFYTLVREIRQYRMKKLNSSDD 176          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RASH_RAT (GTPase HRas OS=Rattus norvegicus GN=Hras1 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 58/170 (34.12%), Postives = 92/170 (54.12%), Query Frame = 3
Query:  177 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDM-NVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683
            +K+V++G   VGKS L  +  ++ F      TI   ++ Q + I+G+     I DTAGQE + A+   Y R   G L V+ I+  ++F+ I ++  ++    D  +V  +LVGNK DL  AR V + + + LA + G+ ++ETSA     V  AF T+V EI     RK+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKL 171          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RASH_HUMAN (GTPase HRas OS=Homo sapiens GN=HRAS PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 58/170 (34.12%), Postives = 92/170 (54.12%), Query Frame = 3
Query:  177 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDM-NVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683
            +K+V++G   VGKS L  +  ++ F      TI   ++ Q + I+G+     I DTAGQE + A+   Y R   G L V+ I+  ++F+ I ++  ++    D  +V  +LVGNK DL  AR V + + + LA + G+ ++ETSA     V  AF T+V EI     RK+
Sbjct:    4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHQYREQIKRVKDSDDVPMVLVGNKCDLA-ARTVESRQAQDLARSYGIPYIETSAKTRQGVEDAFYTLVREIRQHKLRKL 171          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAS2_YEAST (Ras-like protein 2 OS=Saccharomyces cerevisiae GN=RAS2 PE=1 SV=4)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 53/158 (33.54%), Postives = 86/158 (54.43%), Query Frame = 3
Query:  177 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILV-GNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTV 647
            +K+V++G   VGKS L  +  +  F      TI   ++ Q + I+ +     I DTAGQE + A+   Y R   G LLVY I+ + + D +  +  ++    D + V I+V GNKSDL++ ++V+  +G  +A+     F+ETSA  + NV  AF T+
Sbjct:   11 YKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYRKQVV-IDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSAKQAINVEEAFYTL 167          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAN_XENTR (GTP-binding nuclear protein Ran OS=Xenopus tropicalis GN=ran PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 48/154 (31.17%), Postives = 78/154 (50.65%), Query Frame = 3
Query:  177 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAF 638
            FK+VL+GD   GK+  + R    EF     +T+GVE        N   +K  +WDTAGQE+F  +   YY  A  A++++D++ R T+ ++  W  +L    + N+  +L GNK D+KD +    A+       + L + + SA  + N    F
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAN_XENLA (GTP-binding nuclear protein Ran OS=Xenopus laevis GN=ran PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 48/154 (31.17%), Postives = 78/154 (50.65%), Query Frame = 3
Query:  177 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAF 638
            FK+VL+GD   GK+  + R    EF     +T+GVE        N   +K  +WDTAGQE+F  +   YY  A  A++++D++ R T+ ++  W  +L    + N+  +L GNK D+KD +    A+       + L + + SA  + N    F
Sbjct:   11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 161          
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAN_SALSA (GTP-binding nuclear protein Ran OS=Salmo salar GN=ran PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.559e-16
Identity = 48/154 (31.17%), Postives = 78/154 (50.65%), Query Frame = 3
Query:  177 FKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAF 638
            FK+VL+GD   GK+  + R    EF     +T+GVE        N   +K  +WDTAGQE+F  +   YY  A  A++++D++ R T+ ++  W  +L    + N+  +L GNK D+KD +    A+       + L + + SA  + N    F
Sbjct:   10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGAIKYNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCE-NIPIVLCGNKVDIKDRK--VKAKSIVFHRKKNLQYYDISAKSNYNFEKPF 160          
The following BLAST results are available for this feature:
BLAST of CK932640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAYL_HUMAN2.559e-1630.17Putative GTP-binding protein RAY-like OS=Homo sapi... [more]
RASN_PIG2.559e-1633.71GTPase NRas OS=Sus scrofa GN=NRAS PE=2 SV=1[more]
RASN_MONDO2.559e-1633.71GTPase NRas OS=Monodelphis domestica GN=NRAS PE=2 ... [more]
RASN_HUMAN2.559e-1633.71GTPase NRas OS=Homo sapiens GN=NRAS PE=1 SV=1[more]
RASH_RAT2.559e-1634.12GTPase HRas OS=Rattus norvegicus GN=Hras1 PE=1 SV=... [more]
RASH_HUMAN2.559e-1634.12GTPase HRas OS=Homo sapiens GN=HRAS PE=1 SV=1[more]
RAS2_YEAST2.559e-1633.54Ras-like protein 2 OS=Saccharomyces cerevisiae GN=... [more]
RAN_XENTR2.559e-1631.17GTP-binding nuclear protein Ran OS=Xenopus tropica... [more]
RAN_XENLA2.559e-1631.17GTP-binding nuclear protein Ran OS=Xenopus laevis ... [more]
RAN_SALSA2.559e-1631.17GTP-binding nuclear protein Ran OS=Salmo salar GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_D01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932640 ID=CK932640; Name=CK932640; organism=Citrus sinensis; type=EST; length=883bp
GGGGTTACTGGTTTTGATTGTACCACTCAATACTACATTCAGAAGAAAGT
TGGTCCCTGAAAAGATCTACAACCCAGAAGTCTATTTGTTTGCCCATATG
GATCAATAGTGTAAGAATTCTGTGAAAGTAGAAAATGGCTTTTTATTCTG
AGGAGGACAGAGCTGAGGATTATCTTTTCAAGGTTGTTCTAATTGGTGAT
TCAGCTGTTGGGAAATCAAATTTGCTCGCTAGATTTGCAAGAGATGAGTT
CTACCCGAATTCAAAATCGACCATCGGAGTGGAATTCCAAACCCAAAAGA
TGGATATCAATGGAAAGGAGGTTAAGGCACAGATCTGGGACACAGCAGGT
CAGGAACGGTTCAGGGCTGTTACATCTGCGTACTACAGGGGTGCAGTTGG
AGCTCTCTTGGTCTATGACATTAGTAGACGACAGACATTTGATAGCATTG
GCAGATGGCTTAATGAACTTCACACTCACTCAGATATGAATGTAGTAACC
ATACTTGTGGGCAACAAGTCGGATCTCAAAGACGCGAGGGAGGTAACTAC
TGCAGAAGGCAAGGCCTTGGCAGAGGCACAGGGTTTATTTTTCATGGAGA
CTTCAGCTCTTGATTCCTCAAATGTAACTGCTGCCTTTCAGACTGTCGTC
ACAGAGATTTACAATATACTAAGCCGGAAAGTTATGATATCTCAAGAGCT
GAAGCAAAAGGATTCTTCCTCATTCAACGGGAAGACAGTAGTTTTAGAAG
GAGAAAAGAAGGAAGCAGATGCCGAGCCAAAAAAAGCTGGGTGTTGTTCA
TCTTAAAGATGTGATGCTTGCTCAAGCTCAACATCTGATCTGTGTGCTGC
TGAAATACTCTTAGCTCAGACATGCCACTGAAA
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