CK932640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB2A_CHICK (Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.178e-45 Identity = 92/171 (53.80%), Postives = 116/171 (67.84%), Query Frame = 3 Query: 171 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAGQE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+ REV EG+A A GL FMETSA +SNV AF EIY + V Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB2A_CANFA (Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 1.178e-45 Identity = 92/171 (53.80%), Postives = 116/171 (67.84%), Query Frame = 3 Query: 171 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAGQE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+ REV EG+A A GL FMETSA +SNV AF EIY + V Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB2A_RAT (Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=2 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.624e-45 Identity = 91/171 (53.22%), Postives = 116/171 (67.84%), Query Frame = 3 Query: 171 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 YLFK ++IGD+ VGKS LL +F F P T+GVEF + + I+GK++K QIWDTAGQE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+ REV EG+A A GL FMETSA +SNV AF EIY + V Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGV 175
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RB11B_DICDI (Ras-related protein Rab-11B OS=Dictyostelium discoideum GN=rab11B PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.845e-45 Identity = 87/187 (46.52%), Postives = 132/187 (70.59%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKVMISQELKQKDSSSFN 728 DYL K+V+IGDS VGKSNLL+R+ ++EF STIGVEF T+ + I+ K +K Q+WDTAGQE++ ++T +YY+GA+GAL+VY+I+ R +F+++ +WL + ++ + +LVGNKSDLK+ REV+T EGK AE + F+ETSALDS+NV AF + IY L + ++ ++ +++ N Sbjct: 9 DYLCKIVVIGDSGVGKSNLLSRYNKNEFSVGKLSTIGVEFSTKTLKIDNKLIKLQLWDTAGQEKYNSITESYYKGAIGALIVYNIADRNSFNNLEKWLKKFRENAHQDYGIMLVGNKSDLKEYREVSTLEGKQFAEKHYMQFIETSALDSNNVETAFNNLFNFIYYSLFKNKTMTLDINNNGNNNSN 195
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB2_LYMST (Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.845e-45 Identity = 90/164 (54.88%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 171 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 662 YLFK ++IGD+ VGKS LL +F F P TIGVEF + + I+GK++K QIWDTAGQE FR++T +YYRGA GALLVYDI+RR TF+ + WL + HS+ N+V +L+GNKSDL+ REV EG+A A GL FMETSA ++NV AF EIY Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIY 168
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB2B_HUMAN (Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 5.845e-45 Identity = 89/164 (54.27%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 171 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 662 YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAGQE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+ R+V EG+A A GL FMETSA + NV AF EIY Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIY 168
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 1.302e-44 Identity = 88/164 (53.66%), Postives = 114/164 (69.51%), Query Frame = 3 Query: 171 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIY 662 YLFK ++IGD+ VGKS LL +F F P TIGVEF + ++I+GK++K QIWDTAGQE FR++T +YYRGA GALLVYDI+RR+TF+ + WL + HS N+V +L+GNKSDL+ R+V EG+A A GL FMETSA + NV A+ EIY Sbjct: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIY 168
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 2.901e-44 Identity = 88/166 (53.01%), Postives = 124/166 (74.70%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYN 665 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++ +GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ +++F+++ +WLNE+ ++ NV +LVGNK DL + R V+ GKALA+ G+ F+ETSA D++NV AF T+ EI N Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN 171
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.463e-44 Identity = 84/172 (48.84%), Postives = 124/172 (72.09%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 DYLFK++LIGDS VGK+ LL RF+ D F STIG++F+ + ++++GK++K QIWDTAGQERFR +T+AYYRGA+G +LVYDI+ ++FD+I W+ + H+ +V +++GNK D+ D R+V+ G+ LA G+ F+ETSA S+NV AF T+ +I L+RK+ Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKM 177
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 6.463e-44 Identity = 84/172 (48.84%), Postives = 124/172 (72.09%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 DYLFK++LIGDS VGK+ LL RF+ D F STIG++F+ + ++++GK++K QIWDTAGQERFR +T+AYYRGA+G +LVYDI+ ++FD+I W+ + H+ +V +++GNK D+ D R+V+ G+ LA G+ F+ETSA S+NV AF T+ +I L+RK+ Sbjct: 6 DYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKM 177 The following BLAST results are available for this feature:
BLAST of CK932640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932640 ID=CK932640; Name=CK932640; organism=Citrus sinensis; type=EST; length=883bpback to top |