CK932640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.348e-41 Identity = 81/172 (47.09%), Postives = 121/172 (70.35%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 DYLFK++LIGDS VGK+ +L RF+ D F STIG++F+ + ++++GK +K QIWDTAGQERFR +T+AYYRGA+G +LVYDI+ ++FD+I W+ + H+ +V +++GNK D+ D R+V+ G+ LA G+ FMETSA + NV AF T+ +I + +K+ Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.348e-41 Identity = 81/172 (47.09%), Postives = 121/172 (70.35%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSRKV 683 DYLFK++LIGDS VGK+ +L RF+ D F STIG++F+ + ++++GK +K QIWDTAGQERFR +T+AYYRGA+G +LVYDI+ ++FD+I W+ + H+ +V +++GNK D+ D R+V+ G+ LA G+ FMETSA + NV AF T+ +I + +K+ Sbjct: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKL 177
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.348e-41 Identity = 85/171 (49.71%), Postives = 119/171 (69.59%), Query Frame = 3 Query: 150 EEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQG-LFFMETSALDSSNVTAAFQTVVTEI 659 + D D+LFK+VL+GD++VGK+ ++ RF F STIGV+F + ++I GK VK QIWDTAGQERFR +T +YYR A GA+L YDI++R +F S+ W+ ++ ++ N+V +L+GNKSDL + REV+ AE ++LAE L +ETSA DSSNV AF V TE+ Sbjct: 10 DPDEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.348e-41 Identity = 82/164 (50.00%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ R+++ ++ +WL E+ ++ NV +LVGNKSDL + V K A++ G+ F+ETSA +++NV AF T+ EI Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.002e-41 Identity = 82/177 (46.33%), Postives = 122/177 (68.93%), Query Frame = 3 Query: 147 SEEDRAEDYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 677 S R D L K++LIGDS VGKS LL RF D+F P+ +TIG++F+ + +DI + VK Q+WDTAGQERFR +T+AYYRGA+G LLVYD++ ++F++I W + ++++ V ILVGNK DL + R V+T +G+ALA+ G+ F+E S+ + NV F +V T I + +++ Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAK 178
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3) HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41 Identity = 82/164 (50.00%), Postives = 118/164 (71.95%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RF+ D + + STIGV+F+ + ++ +GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ ++F+++ +WL+E+ ++ NV +LVGNKSDL + R + KA A+ G+ FMETSA D++NV AF + I Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASI 169
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41 Identity = 81/169 (47.93%), Postives = 115/169 (68.05%), Query Frame = 3 Query: 171 YLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEIYNILSR 677 +LFK ++IGD+ VGKS LL +F F P TIGVEF + + I+ K +K QIWDTAGQE FR++T +YYRG+ GALLVYDI+RR TF+ + WL + ++++ N+ IL+GNKSD++ R V+ EG+ A+ GL F+ETSA +SNV AF ++IY + + Sbjct: 4 FLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQK 172
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41 Identity = 82/164 (50.00%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR VTS+YYRGA G ++VYD++ ++++ ++ +WL E+ ++ NV +LVGNKSDL + V K A++ G+ F+ETSA +++NV AF T+ EI Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41 Identity = 81/164 (49.39%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ ++++ ++ +WL E+ ++ NV +LVGNKSDL + V K A++ G+ F+ETSA +++NV AF T+ EI Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
BLAST of CK932640 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.921e-41 Identity = 81/164 (49.39%), Postives = 119/164 (72.56%), Query Frame = 3 Query: 168 DYLFKVVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEVKAQIWDTAGQERFRAVTSAYYRGAVGALLVYDISRRQTFDSIGRWLNELHTHSDMNVVTILVGNKSDLKDAREVTTAEGKALAEAQGLFFMETSALDSSNVTAAFQTVVTEI 659 DYLFK++LIGDS VGKS LL RFA D + + STIGV+F+ + ++++GK +K QIWDTAGQERFR +TS+YYRGA G ++VYD++ ++++ ++ +WL E+ ++ NV +LVGNKSDL + V K A++ G+ F+ETSA +++NV AF T+ EI Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169 The following BLAST results are available for this feature:
BLAST of CK932640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932640 ID=CK932640; Name=CK932640; organism=Citrus sinensis; type=EST; length=883bpback to top |