CK932641
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: HNRPG_HUMAN (Heterogeneous nuclear ribonucleoprotein G OS=Homo sapiens GN=RBMX PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 6.504e-12 Identity = 37/86 (43.02%), Postives = 50/86 (58.14%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 334 M AD + F+GGL T + +L F YG I+E ++ DRET +SRGF FVTF +DA MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNTE--TNEKALEAVFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: ROC1_ARATH (Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana GN=At2g37220 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.495e-12 Identity = 33/79 (41.77%), Postives = 55/79 (69.62%), Query Frame = 2 Query: 101 RCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 R +VG L+ D +L FS G ++E+++I DR++GRS+GFGFVT+ + +++AI+ ++G +LDGR I V+EA+ Sbjct: 205 RVYVGNLSWG--VDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAE 281
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: RBM3_HUMAN (Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3 PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.109e-11 Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = 2 Query: 95 EFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 334 E + FVGGL T + +L + FS++G I E ++ DRET RSRGFGF+TF + + A+ MNG++LDGR I V+ A Sbjct: 5 EGKLFVGGLNFN--TDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRAMNGESLDGRQIRVDHA 82
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: ROC2_ARATH (29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis thaliana GN=RBP29 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11 Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 2 Query: 101 RCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 R +VG L+ D +L F+ G ++E+++I DR++GRS+GFGFVT + ++ AI +NG +LDGR I V+EA+ Sbjct: 258 RLYVGNLSWG--VDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINSLNGADLDGRQIRVSEAE 334
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: HNRPG_RAT (Heterogeneous nuclear ribonucleoprotein G OS=Rattus norvegicus GN=Rbmx PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.892e-11 Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 334 M AD + F+GGL T + +L F YG I+E ++ DRET +SRGF FVTF +D MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNTE--TNEKALEAVFGKYGRIVEILLMKDRETNKSRGFAFVTFESPADAKDVARDMNGKSLDGKAIKVEQA 84
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: HNRPG_MOUSE (Heterogeneous nuclear ribonucleoprotein G OS=Mus musculus GN=Rbmx PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11 Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 334 M AD + F+GGL T + +L F YG I+E ++ DRET +SRGF FVT +DA MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNTE--TNEKALEAVFGKYGRIVEIILMKDRETNKSRGFAFVTLESPADAKDAARDMNGKSLDGKAIKVEQA 84
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: HNRPG_BOVIN (Heterogeneous nuclear ribonucleoprotein G OS=Bos taurus GN=RBMX PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.191e-11 Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 2 Query: 77 MASADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 334 M AD + F+GGL T + SL F YG I E ++ DRET +SRGF F+TF + A+ MNG++LDG+ I V +A Sbjct: 1 MVEADRPGKLFIGGLNLE--TDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRDMNGKSLDGKAIKVAQA 84
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: ROC1_NICSY (29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11 Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 83 SADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 S D R +VG LA +L FS G ++++K++ DR++GRSRGFGFVT+ + + +AIE ++G +L+GR I V+ A+ Sbjct: 183 SFDSSNRVYVGNLAWG--VDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 265
BLAST of CK932641 vs. ExPASy Swiss-Prot
Match: ROC1_NICPL (30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11 Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 83 SADVEFRCFVGGLAQARATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 337 S D R +VG LA +L FS G ++++K++ DR++GRSRGFGFVT+ + + +AIE ++G +L+GR I V+ A+ Sbjct: 189 SFDSSNRVYVGNLAWG--VDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRAIRVSPAE 271 The following BLAST results are available for this feature:
BLAST of CK932641 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK932641 ID=CK932641; Name=CK932641; organism=Citrus sinensis; type=EST; length=747bpback to top |