CK932644

Overview
NameCK932644
Unique NameCK932644
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK932644 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.658e-11
Identity = 40/123 (32.52%), Postives = 68/123 (55.28%), Query Frame = 2 
Query:  338 VVGHGGFGLVYQGVLSNGRKVAIKLMD--QAGKQGEDEFKMEVELLGRLRSPYLLALLGYC-SDRRKLLVYDYMANGGL------QEHLYPANGPNSVASKLDWETRLRIALEAAKGLEFLHE 679
            ++G  G G+VY+ VL NG   A++ ++          EF+ EV  + +LR P L+ + G+C  D  KLL+ DY+ NG L       +    ++  +S+ + L +E RL+IA   A+GL +++E
Sbjct:  476 ILGTTGTGIVYKAVLENGTAFAVRRIETESCAAAKPKEFEREVRAIAKLRHPNLVRIRGFCWGDDEKLLISDYVPNGSLLCFFTATKASSSSSSSSSLQNPLTFEARLKIARGMARGLSYINE 598
The following BLAST results are available for this feature:
BLAST of CK932644 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 251
Match NameE-valueIdentityDescription
RPKL_ARATH8.658e-1132.52Receptor protein kinase-like protein At4g34220 OS=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_D06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932644 ID=CK932644; Name=CK932644; organism=Citrus sinensis; type=EST; length=710bp
CTTATTCAAACCCTCCATTTCTCTCTCTTTGCTTCTTATTCTTCCATTCT
CTTAATAAACAGAAATGGAAGGAGACGATGAGTACAGAAGAAAAGAGCGC
GTTGCCTTGGTGGTTATTGTGGTGGTTGCCTCACTAGCCTTGGCTTCTTT
GCTCGTCGCTTTTAGCTACTACTGCTACATACGTAACAAGGTCTCTAAGC
GCTTAAATACCCCCAAAAGTGTTAATCGTGAGGAGAAAGGTGAGTCGGGA
AAATTGGAAGTTACTACTGATAATGGACTTCAGGTGTTCACTTTCAAGCA
GCTGCATTCAGCTACTGGTGGTTTCAGCAAGTCGAATGTGGTTGGGCACG
GTGGTTTTGGGTTAGTGTACCAGGGAGTGCTTAGTAATGGGAGGAAAGTT
GCAATTAAGTTGATGGATCAAGCAGGAAAGCAGGGAGAAGATGAATTTAA
GATGGAGGTGGAGTTGCTTGGTCGTCTACGGTCACCATATCTGCTGGCTC
TGCTTGGATATTGTTCTGATCGTCGTAAATTGCTTGTGTATGATTACATG
GCAAATGGTGGCCTACAAGAACATCTGTATCCTGCTAATGGTCCCAACTC
AGTTGCCTCCAAATTGGACTGGGAAACCCGACTTAGAATAGCTCTTGAAG
CTGCTAAAGGTTTGGAATTTCTCCATGAGCATTGTAGCCCCCCTGTGATT
CACAGAGATT
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