CK932647

Overview
NameCK932647
Unique NameCK932647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22
Identity = 66/247 (26.72%), Postives = 113/247 (45.75%), Query Frame = 1
Query:  160 YTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKDSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLING----------QGHT-TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLVT 861
            Y + +    +S L   + ++ +NG +PGP +     D +I+NV N +     + W+G+KQR++ W DG    T CPI    +Y Y F    Q G+ ++       RA   +G I               D +  +++G+W+  +   + RQ    G +    D   ING          + HT       GKTY+ RI N  ++    F I GH M +VE++ ++T      ++ +  GQ+++VLV+
Sbjct:   31 YQFDIVMSNVSRLCHEKAMVTVNGSYPGPTIYAREGDRVIVNVTNHVKHNMTIHWHGLKQRRNGWADGPAYVTQCPIGSGGSYVYDFNVTRQRGTLWWHAHIAWMRAT-VHGAIVILPAAGVPYPFPKPDDEAEIVLGEWWHADVETVERQGSMLGMAPNMSDAHTINGKPGPLVPFCSEKHTYALQVQSGKTYLLRIINAAVNDELFFSIAGHNMTVVEIDATYTKPFAASTVQLSPGQTMNVLVS 276          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC10_ORYSJ (Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC10 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22
Identity = 64/247 (25.91%), Postives = 109/247 (44.13%), Query Frame = 1
Query:  154 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKDSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTN-HKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQ----------GKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLV 858
            R+YT+ V    ++ L   + +  +NG+FPGP++     D +++ V+N +     + W+G++Q +  W DG    T CPI    +Y Y F    Q G+ F+       R+   YG I                 D  ++ G+WF  +   I+ Q L +G      D   ING     +N             GK Y+ R+ N  L+    F +  HT+ +V+V+ S+      D + +  GQ+ +VL+
Sbjct:   32 RYYTFNVKLQNVTRLCNTRAIPTVNGKFPGPKIVTREGDRVVVKVVNNIKDNITIHWHGVRQMRTGWSDGPAYVTQCPIQTGQSYVYNFTINGQRGTLFWHAHVSWLRST-LYGPIIILPKAGLPLPFTEPHKDVPIIFGEWFNADPEAIVAQALQTGGGPNVSDAYTINGLPGPLYNCSSKDTFRLKVQPGKMYLLRLINAALNDELFFSVANHTLTVVDVDASYVKPFDTDVVLITPGQTTNVLL 277          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.757e-22
Identity = 75/265 (28.30%), Postives = 117/265 (44.15%), Query Frame = 1
Query:  154 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKDSWQDGVLG-TNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSG--KSLPFPDGVLINGQGHTTFN-----------------GDQ----------GKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVL 855
            R + W V     SP G    V+ INGQFPGP +     D + +++ NKL  +  ++ W+GI+Q    W DG    + C I P   + Y+F+  D+ G+YFY     M R+AG YG +               DG+F LL+ DW+          L S   + +  P  +L+NG+G    +                 G+Q           K Y  R+++     S +  I GH M +VE +G++        +D++ G+S SVL
Sbjct:   31 RHFKWDVEYIHWSPDGEESVVMGINGQFPGPTIRAKAGDTVAVHLTNKLHTEGVVIHWHGIRQIGTPWADGTAAISQCAINPGETFLYRFKV-DKAGTYFYHGHYGMQRSAGLYGSL-IVEVGEGEKEPFHYDGEFNLLLSDWWHKGSHEQEVDLSSNPLRWIGEPQTLLLNGRGQYNCSLAARFSKPPLPQCKLRGGEQYAPQILRVRPNKIYRLRVASTTALGSLSLAIGGHKMVVVEADGNYVQPFSVQDMDIYSGESYSVL 293          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC11_ARATH (Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 8.825e-22
Identity = 70/251 (27.89%), Postives = 111/251 (44.22%), Query Frame = 1
Query:  142 DDPYRFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKDSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWF-KTNHKILRQTLDSGKSLPFPDGVLING---------QGHT-TFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLV 858
            D   + Y + V    +S +   + ++ +NG FPGP +     D +I+NV N +     + W+G+KQ ++ W DG    T CPI    +Y Y F    Q G+ ++    L  RA   YG I                 +  +++G+W+ K     + Q    G   P  D   ING         + HT     + GKTY+ RI N  L+    F I GH M +VE++  +T      ++ +  GQ+ +VLV
Sbjct:   22 DAAVKKYQFDVQVKNISRICNAKPIVTVNGMFPGPTVYAREGDRVIINVTNHVQYNMSIHWHGLKQYRNGWADGPAYITQCPIQTGQSYLYDFNVTGQRGTLWWHAHILWLRAT-VYGAIVILPAPGKPYPFPQPYQESNIILGEWWNKDVETAVNQANQLGAPPPMSDAHTINGKPGPLFPCSEKHTFVIEAEAGKTYLLRIINAALNDELFFGIAGHNMTVVEIDAVYTKPFTTKAILLGPGQTTNVLV 271          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC1_THACU (Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.153e-21
Identity = 73/254 (28.74%), Postives = 114/254 (44.88%), Query Frame = 1
Query:  160 YTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFL-----LTWNGIKQRKDSWQDGV-LGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFT-LLIGDWFKTNHKILRQTLDSGK-SLPFPDGVLINGQG-----HTTFNGD--------QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLV 858
            Y   ++ G ++P GV +   L+NG +PGP +     D + + V NKL  P +     + W+G+ Q +++  DG    T CPI P  +YTY     DQ G+Y+Y          G  G +               D + T L+IGDW+   H+  +  L SG  +   P    ING+G     +T  N D        +GK Y  R+ N     SF F ++GH + ++  +G  T     D+ D+  GQ +  +V
Sbjct:   24 YGLKISDGEIAPDGVKRNATLVNGGYPGPLIFANKGDTLKVKVQNKLTNPEMYRTTSIHWHGLLQHRNADDDGPSFVTQCPIVPRESYTYTIPLDDQTGTYWYHSHLSSQYVDGLRGPLVIYDPKDPHRRLYDVDDEKTVLIIGDWY---HESSKAILASGNITRQRPVSATINGKGRFDPDNTPANPDTLYTLKVKRGKRYRLRVINSSEIASFRFSVEGHKVTVIAADGVSTKPYQVDAFDILAGQRIDCVV 274          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC23_ORYSJ (Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC23 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.505e-21
Identity = 69/251 (27.49%), Postives = 115/251 (45.82%), Query Frame = 1
Query:  154 RFYTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKDSWQDG-VLGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGG--INXXXXXXXXXXXXXXDGDFTLLIGDWFKTNH-KILRQTLDSGKSLPFPDGVLINGQ--------GHTT--FNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLVTF 864
            +++ + +   T+  L   Q ++ +NGQFPGP L++   D++I+N+IN+      L W+G++Q +  W DG    T CP+ P  +Y Y+F    Q G+ ++   +   RA   YG   I                    +L+G+W+  N   ++R    +G +    D + +N Q         H T  F    G+T + R  N  L+T     + GH M +V  + S+T       L +  GQ+  VLVTF
Sbjct:   25 QYHEFVIRETTVKRLCKSQSIMTVNGQFPGPTLEIKEGDSLIINLINRGRYNVTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEGTLWWHAHSSWLRAT-VYGALLIRPRDGTSYPFHVQPTRELAPILLGEWWDMNPVDVVRAATRTGAAPNISDALTVNAQPGDLYSCSSHDTAFFPVTSGETNLLRFINAALNTELFVSLAGHNMTVVAADASYTKPYTTSLLLLAPGQTTDVLVTF 274          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC4_TRAVI (Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.966e-21
Identity = 67/248 (27.02%), Postives = 109/248 (43.95%), Query Frame = 1
Query:  169 TVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLT-----WNGIKQRKDSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPF-PDGVLINGQGH---------TTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLVT 861
            T+++G +SP G  +  +L NG FPGP +     DN  +NVI+ L    +L      W+G  Q+  +W DG    N CPI   +++ Y F   DQ G+++Y          G  G +               D + T++ + DW+ T   +       G + P   D  LING G               +QGK Y  R+ ++    ++ F I GH M ++E +  +      DS+ ++ GQ  S ++T
Sbjct:   31 TISNGDVSPDGFTRAAVLANGVFPGPLITGNKGDNFQINVIDNLSNETMLKSTSIHWHGFFQKGTNWADGAAFVNQCPIATGNSFLYDFTATDQAGTFWYHSHLSTQYCDGLRGPMVVYDPSDPHADLYDVDDETTIITLSDWYHTAASL-------GAAFPIGSDSTLINGLGRFAGGDSTDLAVITVEQGKRYRMRLLSLSCDPNYVFSIDGHNMTIIEADAVNHEPLTVDSIQIYAGQRYSFVLT 271          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC2_AGABI (Laccase-2 OS=Agaricus bisporus GN=lcc2 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 65/251 (25.90%), Postives = 113/251 (45.02%), Query Frame = 1
Query:  160 YTWTVTSGTLSPLGVPQEVILINGQFPGPRLDVVTNDNIILNVINKLDQPFL-----LTWNGIKQRKDSWQDGVLGTN-CPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLL-IGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNG-----------DQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLV 858
            + + + +  L+P G  ++ ++ING+FPG  + V   D++ + V NKL    +     + W+G  Q + S QDG    N CP PPN+ +TY+F   D+ G+++Y          G  G                 D + T++ + +W+      +     S   +P  D  LING+G   FNG           +QGK Y FR+  +     F F +  H +  +E +    +     ++D++  Q VSV++
Sbjct:   24 FNFDLVNTRLAPDGFERDTVVINGEFPGTLVQVNKGDSVRIPVNNKLTSSTMRRSVSIHWHGFFQARTSGQDGPAFVNQCPQPPNTTFTYEFSVADESGTFWYHSHLSTQYCDGLRGAFVVYDPEDPLGHLYDVDDETTVITLAEWYHVLAPDINNEFFSSGIIPVQDSGLINGKGR--FNGGPETPFAVVNVEQGKRYRFRVIAISCRPFFTFSVDNHNLTFMEADSVEHDPVEIQNVDIYAAQRVSVIL 272          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC18_ORYSJ (Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC18 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 58/229 (25.33%), Postives = 107/229 (46.72%), Query Frame = 1
Query:  211 EVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKDSWQDGV-LGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLING------------QGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLV 858
            ++ ++NG+FPGP +DV   D ++++VIN+L     + W+G++Q +  W DG    T CPI P    TY+F    Q+G+ ++       RA     G                  D  ++IG+W++ +   L + +  G     P    ING            +     +  +G++Y+ R+ N  L + + F++ GHT  +V  +G++      D + V  G+++ VL+
Sbjct:   51 KIYVVNGRFPGPTVDVTEGDTVVVHVINRLPHGLTIHWHGVRQMRSCWADGAGYVTECPIHPGGEKTYRFNVTGQVGTLWWHAHVTCLRAT--INGAFIIRPRNGKYPFLTPAKDVPIIIGEWWELDLIELDRRMLDGNFDDNPLSATINGKLGDLSNCSSTVEESFVLDVKRGESYLLRVINTALFSEYYFKVAGHTFTVVGADGNYLTPYKTDMVTVAPGEAIDVLM 277          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC18_ORYSI (Putative laccase-18 OS=Oryza sativa subsp. indica GN=LAC18 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.568e-21
Identity = 58/229 (25.33%), Postives = 107/229 (46.72%), Query Frame = 1
Query:  211 EVILINGQFPGPRLDVVTNDNIILNVINKLDQPFLLTWNGIKQRKDSWQDGV-LGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLING------------QGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLV 858
            ++ ++NG+FPGP +DV   D ++++VIN+L     + W+G++Q +  W DG    T CPI P    TY+F    Q+G+ ++       RA     G                  D  ++IG+W++ +   L + +  G     P    ING            +     +  +G++Y+ R+ N  L + + F++ GHT  +V  +G++      D + V  G+++ VL+
Sbjct:   51 KIYVVNGRFPGPTVDVTEGDTVVVHVINRLPHGLTIHWHGVRQMRSCWADGAGYVTECPIHPGGEKTYRFNVTGQVGTLWWHAHVTCLRAT--INGAFIIRPRDGKYPFPTPAKDVPIIIGEWWELDLIELDRRMLDGNFDDNPLSATINGKLGDLSNCSGTVEESFVLDVKRGESYLLRVINTALFSEYYFKVAGHTFTVVGADGNYLTPYKTDMVTVAPGEAIDVLM 277          
The following BLAST results are available for this feature:
BLAST of CK932647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
LAC2_ORYSJ6.757e-2226.72Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 ... [more]
LAC10_ORYSJ6.757e-2225.91Laccase-10 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
ASO_TOBAC6.757e-2228.30L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
LAC11_ARATH8.825e-2227.89Laccase-11 OS=Arabidopsis thaliana GN=LAC11 PE=2 S... [more]
LAC1_THACU1.153e-2128.74Laccase-1 OS=Thanatephorus cucumeris GN=LCC1 PE=1 ... [more]
LAC23_ORYSJ1.505e-2127.49Laccase-23 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC4_TRAVI1.966e-2127.02Laccase-4 OS=Trametes villosa GN=LCC4 PE=3 SV=1[more]
LAC2_AGABI2.568e-2125.90Laccase-2 OS=Agaricus bisporus GN=lcc2 PE=1 SV=1[more]
LAC18_ORYSJ2.568e-2125.33Laccase-18 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC18_ORYSI2.568e-2125.33Putative laccase-18 OS=Oryza sativa subsp. indica ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_C03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932647 ID=CK932647; Name=CK932647; organism=Citrus sinensis; type=EST; length=866bp
GGGGGGCCAGAAGCTTAGATTAGATTCCATTAGACTCTCAACTCGACTCG
ACTCAACTTTGAAGCAATGGCGAGAACACTCTTGCTGCCGCTACTGGTCT
GTGTAGTTTTGGCTGCCTTGAGTGTTGCTTTGGTGAAGGCAGACGACCCG
TATAGATTTTACACTTGGACTGTCACTTCTGGCACTTTGTCTCCTCTTGG
CGTTCCCCAAGAGGTTATTCTTATTAATGGTCAGTTTCCCGGTCCTAGAT
TGGATGTGGTAACCAATGATAATATCATACTCAATGTCATTAACAAGCTA
GATCAACCTTTTCTCCTTACTTGGAATGGAATTAAACAAAGGAAGGATTC
ATGGCAAGATGGAGTCCTTGGAACCAATTGCCCCATTCCTCCAAACTCCA
ACTACACTTACAAATTTCAAACCAAGGATCAGATTGGGTCCTACTTTTAC
TTCCCATCGACTCTGATGCACCGAGCTGCTGGAGGATATGGAGGAATCAA
TATCTATCAGAGACCTCGAATACCGATCCCTTACCCAATCCAGGATGGAG
ATTTCACTTTATTAATTGGCGACTGGTTCAAGACAAACCATAAGATATTA
CGACAGACTTTGGACTCAGGGAAGTCTCTTCCATTTCCAGATGGAGTCCT
TATCAATGGTCAGGGTCATACCACCTTCAACGGTGATCAAGGAAAAACCT
ACATGTTTAGGATATCAAATGTGGGCTTATCGACCTCATTCAACTTCAGG
ATTCAGGGCCATACAATGAAGCTAGTTGAGGTTGAAGGATCTCATACAAA
TTCAAACATTTATGACTCACTTGACGTACATGTGGGTCAATCTGTTTCTG
TCTTAGTAACCTTCAA
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