CK932647

Overview
NameCK932647
Unique NameCK932647
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length866
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC2_PODAN (Laccase-2 OS=Podospora anserina GN=LAC2 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.970e-13
Identity = 71/250 (28.40%), Postives = 105/250 (42.00%), Query Frame = 1
Query:  154 RFYTWTVTS--GTLSPLGV-PQEVILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKDSWQDGVLG-TNCPIPPNS-NYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNG---------DQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLV 858
            R YT T+T     L P GV  Q+V+L+NG   GP +     D I +NVIN L      + W+G+ Q+  +  DG  G T CPIPP   +  Y+F+ + Q G+ +Y        A  G G +               D     +   + K    ++ +T++ G   P  D VL  G G     G           GK +  RI N      F  ++Q HTM ++  +     +   DSL + VGQ   V +
Sbjct:   79 RTYTLTLTEVDNWLGPDGVVKQKVMLVNGDIFGPTITANWGDWIQVNVINNLRTNGTSIHWHGLHQKGTNMHDGANGVTECPIPPKGGSRIYRFRAQ-QYGTSWYHSH---FSAQYGNGVVGTIVVNGPASVPYDIDLGVFPITDYYHKPADVLVEETMNGGP--PPSDTVLFKGHGKNPQTGAGKFANVTLTPGKRHRLRIINTSTHDHFQLKLQNHTMTIIAADMVPVQAQTVDSLFLAVGQRYDVTI 322          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC1_MELAO (Laccase-1 OS=Melanocarpus albomyces GN=LAC1 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.779e-13
Identity = 66/246 (26.83%), Postives = 102/246 (41.46%), Query Frame = 1
Query:  160 YTWTVTSGTLSPLGVPQE-VILINGQFPGPRLDVVTNDNIILNVINKL-DQPFLLTWNGIKQRKDSWQDGVLG-TNCPIPPNSNY-TYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGD---------QGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLV 858
            +  T     + P GV +E V+LING   GP +     D + + VIN L      + W+GI Q+  +  DG  G T CPIPP     TY+++ + Q G+ +Y        A  G G +               D     +   +++    ++  T ++    PF D VLING       G+          GK +  RI N      F   +  HTM ++  +    N+   DSL + VGQ   V++
Sbjct:   88 FNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIHQKDTNLHDGANGVTECPIPPKGGQRTYRWRAR-QYGTSWYHSH---FSAQYGNGVVGTIQINGPASLPYDIDLGVFPITDYYYRAADDLVHFTQNNAP--PFSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNAMTVDSLFLAVGQRYDVVI 327          
BLAST of CK932647 vs. ExPASy Swiss-Prot
Match: LAC16_ORYSJ (Putative laccase-16 OS=Oryza sativa subsp. japonica GN=LAC16 PE=5 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.008e-11
Identity = 45/185 (24.32%), Postives = 81/185 (43.78%), Query Frame = 1
Query:  313 LLTWN--GIKQRKDSWQDGV-LGTNCPIPPNSNYTYKFQTKDQIGSYFYFPSTLMHRAAGGYGGINXXXXXXXXXXXXXXDGDFTLLIGDWFKTNHKILRQTLDSGKSLPFPDGVLINGQGHTTFNGDQGKTYMFRISNVGLSTSFNFRIQGHTMKLVEVEGSHTNSNIYDSLDVHVGQSVSVLV 858
            +L W+  G+ Q ++ W DG    T CPI P  N+TY+    ++ G+ ++   +   RA   +G I               D +  +++ +W+  +   +   LD  K                   GDQG TY+ R+ N GL+    F + GH + +V ++  +T     D + +  GQ++ VL+
Sbjct:   18 ILLWHRHGVDQPRNPWSDGPEFITQCPIRPCGNFTYQVILFEEEGTLWWHAHSDFDRATV-HGAIVIHPKHGTTFPFNKPDKEIPIILSEWWNDD---VENVLDEAKRT----------------GGDQGNTYLLRVINTGLTNDMFFAVAGHCLTVVSIDARYTKPLTVDYIMIAPGQTMDVLL 182          
The following BLAST results are available for this feature:
BLAST of CK932647 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 83
Match NameE-valueIdentityDescription
LAC2_PODAN1.970e-1328.40Laccase-2 OS=Podospora anserina GN=LAC2 PE=2 SV=1[more]
LAC1_MELAO9.779e-1326.83Laccase-1 OS=Melanocarpus albomyces GN=LAC1 PE=1 S... [more]
LAC16_ORYSJ7.008e-1124.32Putative laccase-16 OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_C03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932647 ID=CK932647; Name=CK932647; organism=Citrus sinensis; type=EST; length=866bp
GGGGGGCCAGAAGCTTAGATTAGATTCCATTAGACTCTCAACTCGACTCG
ACTCAACTTTGAAGCAATGGCGAGAACACTCTTGCTGCCGCTACTGGTCT
GTGTAGTTTTGGCTGCCTTGAGTGTTGCTTTGGTGAAGGCAGACGACCCG
TATAGATTTTACACTTGGACTGTCACTTCTGGCACTTTGTCTCCTCTTGG
CGTTCCCCAAGAGGTTATTCTTATTAATGGTCAGTTTCCCGGTCCTAGAT
TGGATGTGGTAACCAATGATAATATCATACTCAATGTCATTAACAAGCTA
GATCAACCTTTTCTCCTTACTTGGAATGGAATTAAACAAAGGAAGGATTC
ATGGCAAGATGGAGTCCTTGGAACCAATTGCCCCATTCCTCCAAACTCCA
ACTACACTTACAAATTTCAAACCAAGGATCAGATTGGGTCCTACTTTTAC
TTCCCATCGACTCTGATGCACCGAGCTGCTGGAGGATATGGAGGAATCAA
TATCTATCAGAGACCTCGAATACCGATCCCTTACCCAATCCAGGATGGAG
ATTTCACTTTATTAATTGGCGACTGGTTCAAGACAAACCATAAGATATTA
CGACAGACTTTGGACTCAGGGAAGTCTCTTCCATTTCCAGATGGAGTCCT
TATCAATGGTCAGGGTCATACCACCTTCAACGGTGATCAAGGAAAAACCT
ACATGTTTAGGATATCAAATGTGGGCTTATCGACCTCATTCAACTTCAGG
ATTCAGGGCCATACAATGAAGCTAGTTGAGGTTGAAGGATCTCATACAAA
TTCAAACATTTATGACTCACTTGACGTACATGTGGGTCAATCTGTTTCTG
TCTTAGTAACCTTCAA
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