CK932652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE_BOVIN (Coatomer subunit epsilon OS=Bos taurus GN=COPE PE=1 SV=3) HSP 1 Score: 183.341 bits (464), Expect = 1.239e-45 Identity = 95/227 (41.85%), Postives = 147/227 (64.76%), Query Frame = 1 Query: 94 DHLFNLRNNFYLGAYQAAINNSDLTN-LPPDDAVERDCLVYRSYIALGSYQLVISEIDESAATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 D LF+++N FY+G+YQ IN + P+ VERD +YR+Y+A Y +V+ EI S+A LQAV++ A YL+S +++ ++ L +S +N T L+A I+ ++++ + AL+ + G ++E A+ VQI LK+ R D A ++L+ MQ DED TLTQLA AW++LA GG K+Q+AY IFQ+ ++K T L+LNG+A C M G ++ AEG+L +AL Sbjct: 17 DELFDVKNAFYIGSYQQCINEAQRVKPSSPERDVERDVFLYRAYLAQRKYGVVLDEIKPSSAPELQAVRMFAEYLASDSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQNPDAALRTLHQGDSLECMAMTVQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEAL 243
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE_DICDI (Coatomer subunit epsilon OS=Dictyostelium discoideum GN=cope PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.770e-35 Identity = 87/235 (37.02%), Postives = 140/235 (59.57%), Query Frame = 1 Query: 94 DHLFNLRNNFYLGAYQAAINNSDLTN---LPPDDAVERDCLVYRSYIALGSYQLVISEIDESAAT----PLQAVKLLALYLSSPD-NKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNEALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQI-DEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 D LF +N FYLG YQ+ IN + + + E D +YR YIA G+Y LV+ E + + + ++LLA YLS PD N+E T+ ++ +W+SD + N L++I I+ +E+ Y+EAL+ N +E ++ +QIFLK+ R D A++ M++I D D T L+ AW+N+ G K++ A F++ +E+Y T L+LNG+AVC + M F++AE LLL+++ Sbjct: 4 DILFESKNYFYLGNYQSTINEINKKSRQIIEKSLKAESDYFLYRCYIAQGNYDLVLQETKNNRGSGEDPTIAGLQLLASYLSKPDENREGTLITITQWISDGVVKFNYHLQVIIATIYFNEQLYDEALQILNNCDHIEGLSMLIQIFLKIDRLDLAQKAYDTMKKIIDPDATPALLSLAWINIYNGEEKLKSALSSFEEMAERYGPTPLLLNGQAVCAIGMKRFEKAESLLLESI 238
BLAST of CK932652 vs. ExPASy Swiss-Prot
Match: COPE_CAEEL (Coatomer subunit epsilon OS=Caenorhabditis elegans GN=F45G2.4 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21 Identity = 72/229 (31.44%), Postives = 125/229 (54.59%), Query Frame = 1 Query: 94 DHLFNLRNNFYLGAYQAAINNS-DLTNLPPDDAVERDCLVYRSYIALGSYQLVISEIDESA-ATPLQAVKLLALYLSSPDNKESTISSLKEWLSDPAIGSNATLRLIAGIIFMHEEDYNE-ALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGLLLDAL 771 D LF++RN F+LG+YQ+ I + ++ ++ E+D +YRSYIA G + + EI + + L AV+ A + ++P K+ ++ ++E ++ I S L A I+ +E D ++ A + + +E A V I +KM++ A +++ M QIDED TL+QLANA + K+++A I+ + S+KY T + +AV + ++ AE LL AL Sbjct: 3 DKLFSIRNYFFLGSYQSCIGEALKFSSKNEEEKQEKDVYLYRSYIAQGQAFIPLKEIPAATKSADLAAVRRYAEFRNNPAAKKKILAEVQEEVASRNIKSEIAAVLAATIL--NEADLSQDAFRAVSRFEGLEARASKVFILIKMNKRKLAIGEVKKMNQIDEDATLSQLANALVTSFGASGKVKDALYIYSEMSDKYGRTTDLEMHQAVVSILTQDYAAAEELLESAL 229 The following BLAST results are available for this feature:
BLAST of CK932652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932652 ID=CK932652; Name=CK932652; organism=Citrus sinensis; type=EST; length=773bpback to top |