CK932658

Overview
NameCK932658
Unique NameCK932658
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_BURCC (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=betB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.468e-25
Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGN 785
            +PATGE++A V      +   A++SA +    W+ +TA +RS+ LR+  DLL    +EL  + T + GKP+ E +  ++  GA  IE+YA  A  + G  +P    +  ++  ++P+GV   I  WN+P+ +   K  PALA G  +V KPSE TP             G+P GV NVV G+
Sbjct:   28 DPATGELLAQVQQASAADVDRAVASAQEGQREWATMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRA-ESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGD 208          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_BURA4 (Betaine aldehyde dehydrogenase OS=Burkholderia ambifaria (strain MC40-6) GN=betB PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.468e-25
Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGN 785
            +PATGE++A V      +   A++SA +    W+ +TA +RS+ LR+  DLL    +EL  + T + GKP+ E +  ++  GA  IE+YA  A  + G  +P    +  ++  ++P+GV   I  WN+P+ +   K  PALA G  +V KPSE TP             G+P GV NVV G+
Sbjct:   28 DPATGELLAQVQQASAADVDRAVASAREGQREWAAMTAMQRSRILRRAVDLLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRA-ESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGD 208          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: ALDH_CLAHE (Aldehyde dehydrogenase OS=Cladosporium herbarum GN=CLAH10 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.468e-25
Identity = 67/183 (36.61%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFN-SWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMG 782
            V NP+   VI  V     K+   A+++A  AF  SW + T   R K L    +L   + + L  + +L+ GK +  A G++      + +Y   A ++ G++I  T PD   +V K+P+GV G I PWNFPL M   K+GPA+ACG TVV+K +E TP             G PPGV+NV+ G
Sbjct:   37 VINPSDESVITQVHEATEKDVDIAVAAARKAFEGSWRQETPENRGKLLNNLANLFEKNIDLLAAVESLDNGKAISMAKGDISMCVGCLRYYGGWADKITGKVIDTT-PDTFNYVKKEPIGVCGQIIPWNFPLLMWAWKIGPAIACGNTVVLKTAEQTPLGGLVAASLVKEAGFPPGVINVISG 218          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: ALDH_ALTAL (Aldehyde dehydrogenase OS=Alternaria alternata GN=ALTA10 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 7.468e-25
Identity = 68/184 (36.96%), Postives = 99/184 (53.80%), Query Frame = 3
Query:  237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS-WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMG 782
            V NP+T EVI +V     K+   A+++A  AFN  W K T   R K L K  DL   + + +  +  L+ GK    A   +V   A  + +Y   A ++ G+++  T PD   ++ K+P+GV G I PWNFP+ M + K+GPA+A G TVV+K +E TP             G PPGV+NV+ G
Sbjct:   37 VINPSTEEVICSVQEATEKDVDIAVAAARKAFNGPWRKETPENRGKLLNKLADLFEKNADLIAAVEALDNGKAFSMAKNVDVPAAAGCLRYYGGWADKIEGKVVD-TAPDSFNYIRKEPIGVCGQIIPWNFPILMWSWKIGPAIATGNTVVLKTAEQTPLSAYIACKLIQEAGFPPGVINVITG 219          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: AL1A1_MOUSE (Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1 PE=1 SV=5)

HSP 1 Score: 114.39 bits (285), Expect = 7.468e-25
Identity = 70/189 (37.04%), Postives = 101/189 (53.44%), Query Frame = 3
Query:  237 VHNPATGEVIANVSCMGGKETKDAISSAFDAF---NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAP 791
            V NPAT EVI +V      +   A+ +A  AF   + W  + A+ER + L K  DL+   +  L  +  L  GK    A + ++    K +++ A  A +++G+ IP+   D   +  ++P+GV G I PWNFP+ M   K+GPAL+CG TVVVKP+E TP             G PPGVVN+V G  P
Sbjct:   40 VLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMEALNGGKVFANAYLSDLGGCIKALKYCAGWADKIHGQTIPSD-GDIFTYTRREPIGVCGQIIPWNFPMLMFIWKIGPALSCGNTVVVKPAEQTPLTALHLASLIKEAGFPPGVVNIVPGYGP 227          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: HPCC_ECOLX (5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase OS=Escherichia coli GN=hpcC PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.754e-25
Identity = 66/182 (36.26%), Postives = 100/182 (54.95%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGE-VDYGAKFIEFYAEEAKRVYGEIIPATLPDRRL-FVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMG 782
            NPATGEV+A+V+  G  E   A+++A +AF  W+ L   ER++ +R+  DL+  +  E+  + T + G P+ +     +   +   EF+AE  +++ G+  P  + D+ L + L QPVGV   ++PWN P    T KV P LA G T V+K SE +P             GIP GV+NVV G
Sbjct:   23 NPATGEVLADVASGGEAEINQAVATAKEAFPKWANLPMKERARLMRRLGDLIDQNVPEIAAMETADTGLPIHQTKNVLIPRASHNFEFFAEVCQQMNGKTYP--VDDKMLNYTLVQPVGVCALVSPWNVPFMTATWKVAPCLALGITAVLKMSELSPLTADRLGELALEAGIPAGVLNVVQG 202          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_VIBVY (Betaine aldehyde dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.754e-25
Identity = 68/183 (37.16%), Postives = 100/183 (54.64%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLF-VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGN 785
            NPATGEV+A++     +    AI SA   F+ WS ++AAERS+ L K   L+  H +EL +L   + GKP++EA V ++  GA  IE++A     + GE    +L   + F   ++P+G+   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NVV G+
Sbjct:   25 NPATGEVLAHIEQADERVLAHAIESAKLGFSVWSSMSAAERSRCLLKAAQLIRDHNDELAELEVRDTGKPIQEASVVDIATGADVIEYFAGLVNGLGGE--QQSLGSNQFFYTRREPLGICAGIGAWNYPIQIAMWKAAPALAAGNAMIFKPSEETPLSALKLAELFTQAGVPDGVFNVVQGD 205          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_VIBHB (Betaine aldehyde dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=betB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.754e-25
Identity = 67/183 (36.61%), Postives = 97/183 (53.01%), Query Frame = 3
Query:  240 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGN 785
            +NPA GE +ANV     ++ + AI SA   F  WS +TA ERS+ L K   LL    +EL  L   + GKP++EA   ++  GA  IE+YA  A  ++GE  P     +  +  ++P+G+   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NV+ G+
Sbjct:   24 YNPANGEPLANVKQANQQDMQAAIESAKRGFAIWSAMTATERSRILLKAVALLRERNDELAALEVADTGKPIQEANCVDIATGADVIEYYAGLAPSMHGEQQPLN-ESQFFYTRREPLGICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKPSEETPLTALKLAEIYSEAGLPDGVFNVIQGD 205          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_STRM5 (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain R551-3) GN=betB PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.754e-25
Identity = 67/186 (36.02%), Postives = 96/186 (51.61%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPATG+VIA V      + + A+ SA +    W+ +TA ERS+ LR+  ++L    +EL  L TL+ GK L E    ++  GA  +E+YA  A  + G  +P        +  ++P+GV   I  WN+P+ +   K  PALA G  +V KPSE TP             G+P GV NVV G   +I
Sbjct:   28 NPATGDVIAEVQVASQADVERAVQSAAEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPLR-ESSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVVQGPGREI 212          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: ALDH2_MESAU (Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.754e-25
Identity = 73/188 (38.83%), Postives = 101/188 (53.72%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAP 791
            NP+TGEVI  V+  G KE  D    A  +AF   + W ++ A++R + L +  DL+   +  L  L TL+ GKP +   + ++D   K + +YA  A + +G+ IP    D   +   +PVGV G I PWNFPL M   K+GPALA G  VV+K +E TP             G PPGVVN+V G  P
Sbjct:   41 NPSTGEVICQVA-EGSKEDVDKAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGP 226          
The following BLAST results are available for this feature:
BLAST of CK932658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BETB_BURCC7.468e-2535.16Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURA47.468e-2535.16Betaine aldehyde dehydrogenase OS=Burkholderia amb... [more]
ALDH_CLAHE7.468e-2536.61Aldehyde dehydrogenase OS=Cladosporium herbarum GN... [more]
ALDH_ALTAL7.468e-2536.96Aldehyde dehydrogenase OS=Alternaria alternata GN=... [more]
AL1A1_MOUSE7.468e-2537.04Retinal dehydrogenase 1 OS=Mus musculus GN=Aldh1a1... [more]
HPCC_ECOLX9.754e-2536.265-carboxymethyl-2-hydroxymuconate semialdehyde deh... [more]
BETB_VIBVY9.754e-2537.16Betaine aldehyde dehydrogenase OS=Vibrio vulnificu... [more]
BETB_VIBHB9.754e-2536.61Betaine aldehyde dehydrogenase OS=Vibrio harveyi (... [more]
BETB_STRM59.754e-2536.02Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]
ALDH2_MESAU9.754e-2538.83Aldehyde dehydrogenase, mitochondrial OS=Mesocrice... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_B06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932658 ID=CK932658; Name=CK932658; organism=Citrus sinensis; type=EST; length=797bp
GCGGGGGTATTTACAAACAAAAATCCTGCNNNTTTTGGGATCAAAGATCC
CAAATCGAATCTTTCATTTCAGTTCAGTTGTCATCACGCGAAACAGTAAT
AAAAGAGTAGTACACCAAACAAAGGACGAAGATGACGTTGAGTGGAGTGG
CACGTGTGGCATTTGTGGGCTCTCGCAGGATTTTCGCATCACATTTGCCA
AGCATGCAGAGCTACACTCCTGCTTTCTCTCGCCAGGTCCACAATCCAGC
AACTGGCGAAGTGATAGCAAATGTATCGTGTATGGGAGGAAAGGAAACAA
AAGATGCTATATCTTCGGCTTTTGATGCGTTTAATTCTTGGAGCAAGCTC
ACTGCTGCTGAGAGAAGCAAGGGTTTGCGGAAATGGTATGATCTACTGAT
GGCTCACAAAGAAGAGCTTGGCCAACTAATAACATTGGAGCAGGGGAAAC
CTCTTAAAGAAGCTGTCGGTGAGGTTGACTATGGAGCCAAGTTTATTGAG
TTCTATGCAGAGGAGGCGAAACGTGTATATGGTGAAATAATTCCCGCAAC
TCTGCCTGATCGCCGGTTATTTGTTCTAAAGCAGCCTGTAGGTGTTGCTG
GTGCAATTACACCATGGAACTTTCCCTTGGCTATGATTACCCGAAAGGTT
GGTCCGGCCCTTGCTTGTGGTTGTACAGTGGTTGTAAAACCCTCTGAATT
TACACCTCTCACTGCTTTAGCAGCAGCTGAGCTCGCCTTGCAGGCTGGAA
TCCCACCGGGTGTTGTGAATGTGGTTATGGGGAATGCTCCTGATATT
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