CK932658

Overview
NameCK932658
Unique NameCK932658
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: AL8A1_BOVIN (Aldehyde dehydrogenase family 8 member A1 OS=Bos taurus GN=ALDH8A1 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.664e-24
Identity = 65/187 (34.76%), Postives = 96/187 (51.34%), Query Frame = 3
Query:  240 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            ++P+TGEV  +V   G +E + A+ +A  AF  WS  +  ERS+ L++  DLL    EEL Q  + +QGK +  A   ++        F+A        E           + ++ PVG+A  I+PWN PL ++T K+ PA+A G TV+ KPSE T              G+PPGVVN+V G  P +
Sbjct:   28 YDPSTGEVYCHVPNSGKEEIEAAVEAARAAFPGWSSRSPQERSQVLQRLADLLEQSLEELAQAESKDQGKTITLARTMDIPRAVHNFRFFASSILHHTSECTQMDHLGCLHYTVRAPVGIAALISPWNLPLYLLTWKIAPAIAAGNTVIAKPSELTSVTAWMMCRLLEKAGVPPGVVNIVFGTGPRV 214          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_RHOS4 (Betaine aldehyde dehydrogenase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 69/180 (38.33%), Postives = 98/180 (54.44%), Query Frame = 3
Query:  246 PATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMG 782
            PATGE IA +        + A++S   A  +W+ +   ER++ LR+  DL+ AH EEL  L TL+ GKPL+E  V +   GA  +EF+A  A  V GE +P  L    ++ +++P+G+   I  WN+P  +   K  PALA G  +V KPSE TP             G+PPG+ NVV G
Sbjct:   29 PATGEEIARLHEATPAVIEAALASGARAQAAWAAMRPVERARILRRASDLIRAHNEELSLLETLDTGKPLQETLVADWASGADALEFFAGLAPVVTGETVP--LGQDFVYTIREPLGLCVGIGAWNYPSQIACWKAAPALALGNAMVFKPSEVTPLGALKLAEILIEAGLPPGLFNVVQG 206          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_BURCH (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 63/182 (34.62%), Postives = 98/182 (53.85%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGN 785
            +PATGE++A V      +   A++SA +    W+ +TA +RS+ LR+  +LL    +EL  + T + GKP+ E +  ++  GA  IE+YA  A  + G  +P    +  ++  ++P+GV   I  WN+P+ +   K  PALA G  +V KPSE TP             G+P GV NVV G+
Sbjct:   28 DPATGELLAQVQQASAADVDRAVASAQEGQREWAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRA-ESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGD 208          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_BURCA (Betaine aldehyde dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 63/182 (34.62%), Postives = 98/182 (53.85%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGN 785
            +PATGE++A V      +   A++SA +    W+ +TA +RS+ LR+  +LL    +EL  + T + GKP+ E +  ++  GA  IE+YA  A  + G  +P    +  ++  ++P+GV   I  WN+P+ +   K  PALA G  +V KPSE TP             G+P GV NVV G+
Sbjct:   28 DPATGELLAQVQQASAADVDRAVASAQEGQREWAAMTAMQRSRILRRAVELLRERNDELAAIETRDTGKPIGETLAVDIVTGADVIEYYAGLATAIEGLQVPLRA-ESFVYTRREPLGVCAGIGAWNYPIQIACWKTAPALAAGNAMVFKPSEVTPLTALKLAEIYTEAGVPAGVFNVVQGD 208          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_ACIBY (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AYE) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 65/186 (34.95%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPA GE+IA +     ++ + A+ SA      W+ +TA ERS+ LR+  D+L    +EL +L TL+ GK   E +  ++  GA  +E+YA  A  + GE +P        +  ++P+GV   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NVV G   +I
Sbjct:   28 NPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLR-ESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREI 212          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_ACIBT (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=betB PE=3 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 65/186 (34.95%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPA GE+IA +     ++ + A+ SA      W+ +TA ERS+ LR+  D+L    +EL +L TL+ GK   E +  ++  GA  +E+YA  A  + GE +P        +  ++P+GV   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NVV G   +I
Sbjct:   28 NPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLR-ESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREI 212          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_ACIBS (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain SDF) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 65/186 (34.95%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPA GE+IA +     ++ + A+ SA      W+ +TA ERS+ LR+  D+L    +EL +L TL+ GK   E +  ++  GA  +E+YA  A  + GE +P        +  ++P+GV   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NVV G   +I
Sbjct:   28 NPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLR-ESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREI 212          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_ACIBC (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain ACICU) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 65/186 (34.95%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPA GE+IA +     ++ + A+ SA      W+ +TA ERS+ LR+  D+L    +EL +L TL+ GK   E +  ++  GA  +E+YA  A  + GE +P        +  ++P+GV   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NVV G   +I
Sbjct:   28 NPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLR-ESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREI 212          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_ACIB5 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB0057) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 65/186 (34.95%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPA GE+IA +     ++ + A+ SA      W+ +TA ERS+ LR+  D+L    +EL +L TL+ GK   E +  ++  GA  +E+YA  A  + GE +P        +  ++P+GV   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NVV G   +I
Sbjct:   28 NPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLR-ESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREI 212          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_ACIB3 (Betaine aldehyde dehydrogenase OS=Acinetobacter baumannii (strain AB307-0294) GN=betB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.173e-24
Identity = 65/186 (34.95%), Postives = 97/186 (52.15%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKE-AVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPA GE+IA +     ++ + A+ SA      W+ +TA ERS+ LR+  D+L    +EL +L TL+ GK   E +  ++  GA  +E+YA  A  + GE +P        +  ++P+GV   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NVV G   +I
Sbjct:   28 NPANGEIIATLQQASEQDIEAAVKSAQQGQKIWAAMTAMERSRILRRAVDILRERNDELARLETLDTGKAYSETSTVDIVTGADVLEYYAGLATAIQGEQVPLR-ESSFFYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSETTPLTALKLAEIYTEAGLPDGVFNVVQGAGREI 212          
The following BLAST results are available for this feature:
BLAST of CK932658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL8A1_BOVIN1.664e-2434.76Aldehyde dehydrogenase family 8 member A1 OS=Bos t... [more]
BETB_RHOS42.173e-2438.33Betaine aldehyde dehydrogenase OS=Rhodobacter spha... [more]
BETB_BURCH2.173e-2434.62Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_BURCA2.173e-2434.62Betaine aldehyde dehydrogenase OS=Burkholderia cen... [more]
BETB_ACIBY2.173e-2434.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBT2.173e-2434.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBS2.173e-2434.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIBC2.173e-2434.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB52.173e-2434.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]
BETB_ACIB32.173e-2434.95Betaine aldehyde dehydrogenase OS=Acinetobacter ba... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_B06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932658 ID=CK932658; Name=CK932658; organism=Citrus sinensis; type=EST; length=797bp
GCGGGGGTATTTACAAACAAAAATCCTGCNNNTTTTGGGATCAAAGATCC
CAAATCGAATCTTTCATTTCAGTTCAGTTGTCATCACGCGAAACAGTAAT
AAAAGAGTAGTACACCAAACAAAGGACGAAGATGACGTTGAGTGGAGTGG
CACGTGTGGCATTTGTGGGCTCTCGCAGGATTTTCGCATCACATTTGCCA
AGCATGCAGAGCTACACTCCTGCTTTCTCTCGCCAGGTCCACAATCCAGC
AACTGGCGAAGTGATAGCAAATGTATCGTGTATGGGAGGAAAGGAAACAA
AAGATGCTATATCTTCGGCTTTTGATGCGTTTAATTCTTGGAGCAAGCTC
ACTGCTGCTGAGAGAAGCAAGGGTTTGCGGAAATGGTATGATCTACTGAT
GGCTCACAAAGAAGAGCTTGGCCAACTAATAACATTGGAGCAGGGGAAAC
CTCTTAAAGAAGCTGTCGGTGAGGTTGACTATGGAGCCAAGTTTATTGAG
TTCTATGCAGAGGAGGCGAAACGTGTATATGGTGAAATAATTCCCGCAAC
TCTGCCTGATCGCCGGTTATTTGTTCTAAAGCAGCCTGTAGGTGTTGCTG
GTGCAATTACACCATGGAACTTTCCCTTGGCTATGATTACCCGAAAGGTT
GGTCCGGCCCTTGCTTGTGGTTGTACAGTGGTTGTAAAACCCTCTGAATT
TACACCTCTCACTGCTTTAGCAGCAGCTGAGCTCGCCTTGCAGGCTGGAA
TCCCACCGGGTGTTGTGAATGTGGTTATGGGGAATGCTCCTGATATT
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