CK932658

Overview
NameCK932658
Unique NameCK932658
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length797
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: AL1A7_MOUSE (Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculus GN=Aldh1a7 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.965e-25
Identity = 71/191 (37.17%), Postives = 105/191 (54.97%), Query Frame = 3
Query:  237 VHNPATGEVIANVSCMGGKETKDAISSAFDAF---NSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVL--KQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAP 791
            V NPAT EVI +V      +   A+ +A  AF   + W  + A+ER + L K  DL+   +  L  + ++  GK    A + +V+   K ++++A  A +++G+ IP+   D  +F    ++P+GV G I PWN PL + T K+GPAL+CG TVVVKP+E TP             G PPGVVN+V G  P
Sbjct:   40 VLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLMERDRLLLATMESMNAGKVFAHAYLLDVEISIKALQYFAGWADKIHGQTIPS---DGNIFTYTRREPIGVCGQIIPWNGPLIIFTWKLGPALSCGNTVVVKPAEQTPLTALHMASLIKEAGFPPGVVNIVPGYGP 227          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: IOLA1_BACSK (Methylmalonate semialdehyde dehydrogenase [acylating] 1 OS=Bacillus clausii (strain KSM-K16) GN=iolA1 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.567e-25
Identity = 69/182 (37.91%), Postives = 93/182 (51.10%), Query Frame = 3
Query:  237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMG 782
            V NPAT EVI  V      + + A+ +A  AF  WSK+    R++ L  +  LL   KEEL +LIT+E GK L EA GEV  G + +EF A     + G+ +P    D      + P+GV G I P+NFP+ +       A+A G   ++KPSE TP             G+P GV NVV G
Sbjct:   30 VVNPATKEVICQVPLSTKADVEYAVEAAKTAFAKWSKVAVPRRARILFNYQQLLQRDKEELARLITIENGKNLTEARGEVQRGIENVEFAAGAPSLMMGDSLPMIATDVEASNYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNAFLLKPSERTPLLTEKLADLLTEAGVPDGVFNVVYG 211          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_PSEAE (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa GN=betB PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.567e-25
Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPA GEV+A V     ++ + A+ SA +    W+ +TA +RS+ LR+  D+L    +EL  L TL+ GKPL E    ++  GA  +E+YA     + GE IP       ++  ++P+GV   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NV+ G+  ++
Sbjct:   28 NPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREV 212          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_PSEAB (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=betB PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.567e-25
Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPA GEV+A V     ++ + A+ SA +    W+ +TA +RS+ LR+  D+L    +EL  L TL+ GKPL E    ++  GA  +E+YA     + GE IP       ++  ++P+GV   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NV+ G+  ++
Sbjct:   28 NPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTTLKLAEIYTEAGVPDGVFNVLTGSGREV 212          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_PSEA8 (Betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=betB PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.567e-25
Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPA GEV+A V     ++ + A+ SA +    W+ +TA +RS+ LR+  D+L    +EL  L TL+ GKPL E    ++  GA  +E+YA     + GE IP       ++  ++P+GV   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NV+ G+  ++
Sbjct:   28 NPANGEVLAKVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLR-ETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREV 212          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: AL1A2_HUMAN (Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 2.567e-25
Identity = 70/189 (37.04%), Postives = 97/189 (51.32%), Query Frame = 3
Query:  237 VHNPATGEVIANVSCMGGKETKDAISSAFDAFNS---WSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDYGA-KFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAP 791
            V+NPATGE +  V      +   A+ +A  AF+    W ++ A+ER + L K  DL+   +  L  + +L  GKP  +A      G  K   +YA  A +++G  IP    D   F   +P+GV G I PWNFPL M   K+ PAL CG TVV+KP+E TP             G PPGV+N++ G  P
Sbjct:   57 VYNPATGEQVCEVQEADKADIDKAVQAARLAFSLGSVWRRMDASERGRLLDKLADLVERDRAVLATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKIHGMTIPVD-GDYFTFTRHEPIGVCGQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILPGYGP 244          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: ALDH2_HORSE (Aldehyde dehydrogenase, mitochondrial OS=Equus caballus GN=ALDH2 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.352e-25
Identity = 74/188 (39.36%), Postives = 101/188 (53.72%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKD----AISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKP-LKEAVGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAP 791
            NP+TGEVI  V+  G KE  D    A  +AF   + W ++ A++R + L +  DL+   +  L  L TL+ GKP +   + ++D   K + +YA  A + +G+ IP    D   +   +PVGV G I PWNFPL M   K+GPALA G  VV+K +E TP             G PPGVVNVV G  P
Sbjct:   41 NPSTGEVICQVAA-GDKEDVDRAVKAARAAFQLGSPWRRMDASDRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPID-GDFFSYTRHEPVGVCGQIIPWNFPLLMQAAKLGPALATGNVVVMKVAEQTPLTALYVANLTKEAGFPPGVVNVVPGFGP 226          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: AL8A1_MOUSE (Aldehyde dehydrogenase family 8 member A1 OS=Mus musculus GN=Aldh8a1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.352e-25
Identity = 65/187 (34.76%), Postives = 97/187 (51.87%), Query Frame = 3
Query:  240 HNPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEA-VGEVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            ++P+TGEV   V   G +E + A+ +A +AF +WS  +  ERS  L +  D+L    EEL Q  + +QGK L  A   ++        F+A        E    +      + ++ PVG+AG I+PWN PL ++T K+ PA+A G TV+ KPSE T              G+PPGV+N+V G  P +
Sbjct:   28 YDPSTGEVYCKVPNSGKEEIEAAVEAAREAFPAWSSRSPQERSLVLNRLADVLEQSLEELAQAESKDQGKTLTLARTMDIPRSVLNFRFFASSNLHHVSECTQMSHLGCMHYTVRTPVGIAGLISPWNLPLYLLTWKIAPAIAAGNTVIAKPSEMTSVTAWMFCKLLDKAGVPPGVINIVFGTGPRV 214          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_VIBSL (Betaine aldehyde dehydrogenase OS=Vibrio splendidus (strain LGP32) GN=betB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.378e-25
Identity = 71/184 (38.59%), Postives = 100/184 (54.35%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVGEVDY--GAKFIEFYAEEAKRVYGEIIPATLPDRRLF-VLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGN 785
            NPA GE IA +      + ++AI SA   F  WS +TA ERS+ L K  ++L A   +L  L  ++ GKPL+EA+ EVD   GA  IE++A  A  + G+  P  L D + F   ++P+G+   I  WN+P+ +   K  PALA G  ++ KPSE TP             G+P GV NVV G+
Sbjct:   25 NPANGEPIATLGQASSADVENAIESAKRGFAVWSAMTAVERSRILLKAVEILRARNNDLANLEVVDTGKPLQEAI-EVDVASGADVIEYFAGLAPTLQGDQQP--LSDTQFFYTRREPLGICAGIGAWNYPIQIAMWKSAPALAAGNAMIFKPSEETPLTALKLAEIFTEAGLPDGVFNVVQGD 205          
BLAST of CK932658 vs. ExPASy Swiss-Prot
Match: BETB_STRMK (Betaine aldehyde dehydrogenase OS=Stenotrophomonas maltophilia (strain K279a) GN=betB PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.378e-25
Identity = 68/186 (36.56%), Postives = 96/186 (51.61%), Query Frame = 3
Query:  243 NPATGEVIANVSCMGGKETKDAISSAFDAFNSWSKLTAAERSKGLRKWYDLLMAHKEELGQLITLEQGKPLKEAVG-EVDYGAKFIEFYAEEAKRVYGEIIPATLPDRRLFVLKQPVGVAGAITPWNFPLAMITRKVGPALACGCTVVVKPSEFTPXXXXXXXXXXXXXGIPPGVVNVVMGNAPDI 797
            NPATGEVIA V      + + A+ SA +    W+ +TA ERS+ LR+  ++L    +EL  L TL+ GK L E    ++  GA  +E+YA  A  + G  +P        +  ++P+GV   I  WN+P+ +   K  PALA G  +V KPSE TP             G+P GV NVV G   +I
Sbjct:   28 NPATGEVIAEVQVASQADVERAVQSASEGQKVWAAMTAMERSRILRRAVEILRERNDELAHLETLDTGKALAETTTVDIVTGADVVEYYAGLATAIEGIQLPLR-ESSFFYTRREPLGVVAGIGAWNYPIQIAMWKSAPALAAGNAMVFKPSEVTPLTAIRLAEIYTEAGVPAGVFNVVQGPGREI 212          
The following BLAST results are available for this feature:
BLAST of CK932658 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AL1A7_MOUSE1.965e-2537.17Aldehyde dehydrogenase, cytosolic 1 OS=Mus musculu... [more]
IOLA1_BACSK2.567e-2537.91Methylmalonate semialdehyde dehydrogenase [acylati... [more]
BETB_PSEAE2.567e-2534.95Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEAB2.567e-2534.95Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
BETB_PSEA82.567e-2534.95Betaine aldehyde dehydrogenase OS=Pseudomonas aeru... [more]
AL1A2_HUMAN2.567e-2537.04Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2... [more]
ALDH2_HORSE3.352e-2539.36Aldehyde dehydrogenase, mitochondrial OS=Equus cab... [more]
AL8A1_MOUSE3.352e-2534.76Aldehyde dehydrogenase family 8 member A1 OS=Mus m... [more]
BETB_VIBSL4.378e-2538.59Betaine aldehyde dehydrogenase OS=Vibrio splendidu... [more]
BETB_STRMK4.378e-2536.56Betaine aldehyde dehydrogenase OS=Stenotrophomonas... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_B06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932658 ID=CK932658; Name=CK932658; organism=Citrus sinensis; type=EST; length=797bp
GCGGGGGTATTTACAAACAAAAATCCTGCNNNTTTTGGGATCAAAGATCC
CAAATCGAATCTTTCATTTCAGTTCAGTTGTCATCACGCGAAACAGTAAT
AAAAGAGTAGTACACCAAACAAAGGACGAAGATGACGTTGAGTGGAGTGG
CACGTGTGGCATTTGTGGGCTCTCGCAGGATTTTCGCATCACATTTGCCA
AGCATGCAGAGCTACACTCCTGCTTTCTCTCGCCAGGTCCACAATCCAGC
AACTGGCGAAGTGATAGCAAATGTATCGTGTATGGGAGGAAAGGAAACAA
AAGATGCTATATCTTCGGCTTTTGATGCGTTTAATTCTTGGAGCAAGCTC
ACTGCTGCTGAGAGAAGCAAGGGTTTGCGGAAATGGTATGATCTACTGAT
GGCTCACAAAGAAGAGCTTGGCCAACTAATAACATTGGAGCAGGGGAAAC
CTCTTAAAGAAGCTGTCGGTGAGGTTGACTATGGAGCCAAGTTTATTGAG
TTCTATGCAGAGGAGGCGAAACGTGTATATGGTGAAATAATTCCCGCAAC
TCTGCCTGATCGCCGGTTATTTGTTCTAAAGCAGCCTGTAGGTGTTGCTG
GTGCAATTACACCATGGAACTTTCCCTTGGCTATGATTACCCGAAAGGTT
GGTCCGGCCCTTGCTTGTGGTTGTACAGTGGTTGTAAAACCCTCTGAATT
TACACCTCTCACTGCTTTAGCAGCAGCTGAGCTCGCCTTGCAGGCTGGAA
TCCCACCGGGTGTTGTGAATGTGGTTATGGGGAATGCTCCTGATATT
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