CK932666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12 Identity = 35/107 (32.71%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 23 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVG-VIKSVDKKD 340 F Q++I+ H I GY VL HT V+ +++ +D++SG++ + P+F+K ++ + +ETF ++P +GRF +RD +T+A+G V+K V +KD Sbjct: 522 FDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: ERF3B_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Mus musculus GN=Gspt2 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12 Identity = 35/107 (32.71%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 23 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVG-VIKSVDKKD 340 F Q++I+ H I GY VL HT V+ +++ +D++SG++ + P+F+K ++ + +ETF ++P +GRF +RD +T+A+G V+K V +KD Sbjct: 526 FDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 632
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: ERF3B_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Homo sapiens GN=GSPT2 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 3.211e-12 Identity = 35/107 (32.71%), Postives = 63/107 (58.88%), Query Frame = 2 Query: 23 FTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVG-VIKSVDKKD 340 F Q++I+ H I GY VL HT V+ +++ +D++SG++ + P+F+K ++ + +ETF ++P +GRF +RD +T+A+G V+K V +KD Sbjct: 522 FDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: ERF3_ZYGRO (Eukaryotic peptide chain release factor GTP-binding subunit OS=Zygosaccharomyces rouxii GN=SUP35 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.477e-12 Identity = 34/107 (31.78%), Postives = 61/107 (57.01%), Query Frame = 2 Query: 8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 328 K + F +QV I+ + +G++ V+ HT+ V+ ++L K++R + ++ +K P F K G + +P+ VET+ +YP LGRF +RD T+A+G I + Sbjct: 554 KNVTRFVAQVAIVELKSILSSGFSCVMHVHTAIEEVRITKLLHKLERGTNRKSKKPPAFAKKGMKIIAVLETERPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 660
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 7.154e-12 Identity = 34/104 (32.69%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVI 319 K + F +Q+ I+ + NG++ V+ HT+ VKF E+ K+++ + ++ +K P F K G + ++P+ ET+ +YP LGRF +RD T+A+G I Sbjct: 605 KTVTKFEAQIAIVELKSILSNGFSCVMHLHTAIEEVKFVELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVSEPVCAETYKDYPQLGRFTLRDQGTTIAIGKI 708
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: ERF3_PICPI (Eukaryotic peptide chain release factor GTP-binding subunit OS=Pichia pinus GN=SUP2 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.637e-11 Identity = 31/104 (29.81%), Postives = 58/104 (55.77%), Query Frame = 2 Query: 8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVI 319 K + F +Q+ I+ + G++ V+ HT+ V F ++L + + + + +K P F K G + T+P+ +E++ +YP LGRF +RD QT+A+G + Sbjct: 634 KTVTRFEAQIAIVELKSILSTGFSCVMHVHTAIEEVTFTQLLHNLQKGTNRRSKKAPAFAKQGMKIIAVLETTEPVCIESYDDYPQLGRFTLRDQGQTIAIGKV 737
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: ERF3_YEAST (Eukaryotic peptide chain release factor GTP-binding subunit OS=Saccharomyces cerevisiae GN=SUP35 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 33/107 (30.84%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSV 328 K + F +Q+ I+ I G++ V+ HT+ V ++L K+++ + ++ +K P F K G + P+ VET+ +YP LGRF +RD T+A+G I + Sbjct: 577 KSVTKFVAQIAIVELKSIIAAGFSCVMHVHTAIEEVHIVKLLHKLEKGTNRKSKKPPAFAKKGMKVIAVLETEAPVCVETYQDYPQLGRFTLRDQGTTIAIGKIVKI 683 The following BLAST results are available for this feature:
BLAST of CK932666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 167
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932666 ID=CK932666; Name=CK932666; organism=Citrus sinensis; type=EST; length=792bpback to top |