CK932666

Overview
NameCK932666
Unique NameCK932666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2880 contig Csv1_Contig2880:1050..1841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A3_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis PE=1 SV=2)

HSP 1 Score: 179.104 bits (453), Expect = 2.436e-44
Identity = 86/108 (79.63%), Postives = 96/108 (88.89%), Query Frame = 2
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A +FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE +PKFLK+GDA  V+MIP KPM VETFS+YPPLGRFAVRDMRQTVAVGVIK VDKK
Sbjct:  337 AGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVETFSDYPPLGRFAVRDMRQTVAVGVIKGVDKK 444          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_ORYLA (Elongation factor 1-alpha OS=Oryzias latipes GN=eef1a PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 3.182e-44
Identity = 85/114 (74.56%), Postives = 98/114 (85.96%), Query Frame = 2
Query:    8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 349
            K A++F +QVII+NHPGQI  GYAPVLDCHT+HIA KF E++ KIDRRSGK+LE  PKF+K+GDA  VK+IP KPMVVE FS YPPLGRFAVRDMRQTVAVGVIK+VD K+ SG
Sbjct:  335 KAAASFNAQVIILNHPGQINQGYAPVLDCHTAHIACKFNELIEKIDRRSGKKLEDNPKFVKSGDAAIVKLIPQKPMVVEPFSNYPPLGRFAVRDMRQTVAVGVIKAVDTKEISG 448          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_YARLI (Elongation factor 1-alpha OS=Yarrowia lipolytica GN=TEF PE=2 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 4.155e-44
Identity = 81/114 (71.05%), Postives = 98/114 (85.96%), Query Frame = 2
Query:    8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 349
            KG  +F +QVI++NHPGQIG GYAPVLDCHT+HIA KF  ++ KIDRR+GK++E  PKF+K+GDA  VKM+P+KPM VE F+EYPPLGRFAVRDMRQTVAVGVIKSV+K D +G
Sbjct:  334 KGCDSFNAQVIVLNHPGQIGAGYAPVLDCHTAHIACKFDTLIEKIDRRTGKKMEDSPKFIKSGDAAIVKMVPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKSVEKSDKAG 447          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_TRIRE (Elongation factor 1-alpha OS=Trichoderma reesei GN=tef1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.155e-44
Identity = 82/114 (71.93%), Postives = 99/114 (86.84%), Query Frame = 2
Query:   11 GASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 352
            GA++FT+QVI+MNHPGQ+G GYAPVLDCHT+HIA KFAE+L KIDRR+GK  E  PKF+K+GD+  VKMIP+KPM VE F++YPPLGRFAVRDMRQTVAVGVIK+V+K   + A
Sbjct:  335 GAASFTAQVIVMNHPGQVGAGYAPVLDCHTAHIACKFAELLEKIDRRTGKATESAPKFIKSGDSAIVKMIPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKAVEKSSAAAA 448          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_AURPU (Elongation factor 1-alpha OS=Aureobasidium pullulans GN=TEF1 PE=3 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 4.155e-44
Identity = 81/115 (70.43%), Postives = 98/115 (85.22%), Query Frame = 2
Query:    8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSGA 352
            KG  +F +QVI++NHPGQ+G GYAPVLDCHT+HIA KF+E++ KIDRR+GK +E  PKF+K+GDA  VKM+P+KPM VE F++YPPLGRFAVRDMRQTVAVGVIKSV K D  GA
Sbjct:  332 KGCDSFNAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFSELVEKIDRRTGKSVEAAPKFIKSGDAAIVKMVPSKPMCVEAFTDYPPLGRFAVRDMRQTVAVGVIKSVAKSDKQGA 446          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A2_XENLA (Elongation factor 1-alpha, oocyte form OS=Xenopus laevis GN=eef1ao PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.427e-44
Identity = 86/111 (77.48%), Postives = 97/111 (87.39%), Query Frame = 2
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPS 346
            A +FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE +PKFLK+GDA  V+MIP KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK VDKK  S
Sbjct:  337 AGSFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKQKIDRRSGKKLEDDPKFLKSGDAAIVEMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKGVDKKAAS 447          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_ASPOR (Elongation factor 1-alpha OS=Aspergillus oryzae GN=tef1 PE=3 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.088e-44
Identity = 80/108 (74.07%), Postives = 98/108 (90.74%), Query Frame = 2
Query:   11 GASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 334
            G  +F +QVI++NHPGQ+GNGYAPVLDCHT+HIA KFAE+L KIDRR+GK +E +PKF+K+GDA  VKMIP+KPM VE+F+++PPLGRFAVRDMRQTVAVGVIKSV+K
Sbjct:  335 GCDSFNAQVIVLNHPGQVGNGYAPVLDCHTAHIACKFAELLEKIDRRTGKSVEDKPKFIKSGDAAIVKMIPSKPMCVESFTDFPPLGRFAVRDMRQTVAVGVIKSVEK 442          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_DROME (Elongation factor 1-alpha 1 OS=Drosophila melanogaster GN=Ef1alpha48D PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 9.257e-44
Identity = 81/114 (71.05%), Postives = 98/114 (85.96%), Query Frame = 2
Query:    8 KGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 349
            KGA++FT+QVI++NHPGQI NGY PVLDCHT+HIA KFAEI  K+DRRSGK  E+ PKF+K+GDA  V ++P+KP+ VE F E+PPLGRFAVRDMRQTVAVGVIK+V+ KD SG
Sbjct:  335 KGAADFTAQVIVLNHPGQIANGYTPVLDCHTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKDASG 448          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A0_XENLA (Elongation factor 1-alpha, somatic form OS=Xenopus laevis GN=eef1as PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.257e-44
Identity = 85/108 (78.70%), Postives = 96/108 (88.89%), Query Frame = 2
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A +FT+QVII+NHPGQIG GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V MIP KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+V+KK
Sbjct:  337 AGSFTAQVIILNHPGQIGAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDNPKFLKSGDAAIVDMIPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVEKK 444          
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_PODCU (Elongation factor 1-alpha OS=Podospora curvicolla GN=TEF PE=3 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.209e-43
Identity = 81/108 (75.00%), Postives = 97/108 (89.81%), Query Frame = 2
Query:   11 GASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDK 334
            GA++F +QVI++NHPGQ+G GYAPVLDCHT+HIA KFAE+L KIDRR+GK +E+ PKF+K+GDA  VKMIP+KPM VE F+EYPPLGRFAVRDMRQTVAVGVIK V+K
Sbjct:  335 GAASFDAQVIVLNHPGQVGAGYAPVLDCHTAHIACKFAELLQKIDRRTGKAVEESPKFIKSGDAAIVKMIPSKPMCVEAFTEYPPLGRFAVRDMRQTVAVGVIKKVEK 442          
The following BLAST results are available for this feature:
BLAST of CK932666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
EF1A3_XENLA2.436e-4479.63Elongation factor 1-alpha, oocyte form OS=Xenopus ... [more]
EF1A_ORYLA3.182e-4474.56Elongation factor 1-alpha OS=Oryzias latipes GN=ee... [more]
EF1A_YARLI4.155e-4471.05Elongation factor 1-alpha OS=Yarrowia lipolytica G... [more]
EF1A_TRIRE4.155e-4471.93Elongation factor 1-alpha OS=Trichoderma reesei GN... [more]
EF1A_AURPU4.155e-4470.43Elongation factor 1-alpha OS=Aureobasidium pullula... [more]
EF1A2_XENLA5.427e-4477.48Elongation factor 1-alpha, oocyte form OS=Xenopus ... [more]
EF1A_ASPOR7.088e-4474.07Elongation factor 1-alpha OS=Aspergillus oryzae GN... [more]
EF1A1_DROME9.257e-4471.05Elongation factor 1-alpha 1 OS=Drosophila melanoga... [more]
EF1A0_XENLA9.257e-4478.70Elongation factor 1-alpha, somatic form OS=Xenopus... [more]
EF1A_PODCU1.209e-4375.00Elongation factor 1-alpha OS=Podospora curvicolla ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_A07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932666 ID=CK932666; Name=CK932666; organism=Citrus sinensis; type=EST; length=792bp
GGGCGCCAAGGGGGCATCCAACTTCACCTCCCAAGTTATCATCATGAACC
ACCCTGGCCAGATTGGAAACGGTTATGCACCTGTTCTTGATTGCCACACT
TCCCACATAGCTGTCAAGTTTGCTGAAATCTTGACCAAGATTGACAGGCG
ATCTGGTAAGGAGCTGGAGAAGGAGCCCAAATTCTTAAAGAATGGTGATG
CTGGGTTTGTTAAGATGATTCCCACCAAGCCTATGGTTGTGGAAACTTTC
TCCGAATATCCCCCACTTGGTCGTTTTGCTGTGAGAGACATGCGCCAGAC
CGTCGCTGTTGGAGTCATCAAGAGCGTGGACAAGAAGGATCCATCTGGAG
CCAAGGTAACCAAGTCTGCTGTGAAGAAGAAGTGAACTGTGCTGGTATCT
TTGTCTGCAAGTAATGTCTATAGGCGTCATCACAATAAAGATTGTGTTCT
TTTTAGGCATAAATGTGTTGGATGTTTGGGTCGTCAATTTGCTGGTTATA
ATTACAATTCGTCACCATCGACAAGAGACTTTTGTTCACAGAACTGGGTT
CTTGATCGGCGGTGGCGAGATTACTGTATTGAGTCTATTTTTGTTGTCCA
TGTCATGTTCAAACTTGGATATTTTGTAAGCAGCTCAGGAGTTTTAGGTC
TCTGCTGAGCTCCTTAAGATGTTGTTTGTTGATGTTTTATGTTCTATCTA
GTTTGCCATTTTCCNAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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