CK932666

Overview
NameCK932666
Unique NameCK932666
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length792
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2880 contig Csv1_Contig2880:1050..1841. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_RAT (Elongation factor 1-alpha 1 OS=Rattus norvegicus GN=Eef1a1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  337 AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_RABIT (Elongation factor 1-alpha 1 OS=Oryctolagus cuniculus GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  337 AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_PONAB (Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF1A1 PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  337 AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_PANTR (Elongation factor 1-alpha 1 OS=Pan troglodytes GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  337 AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_MOUSE (Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef1a1 PE=1 SV=3)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  337 AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_HUMAN (Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF1A1 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  337 AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_FELCA (Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  337 AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_CRIGR (Elongation factor 1-alpha 1 OS=Cricetulus griseus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  337 AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A1_BOVIN (Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A1 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.518e-43
Identity = 84/108 (77.78%), Postives = 95/108 (87.96%), Query Frame = 2 
Query:   14 ASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKK 337
            A+ FT+QVII+NHPGQI  GYAPVLDCHT+HIA KFAE+  KIDRRSGK+LE  PKFLK+GDA  V M+P KPM VE+FS+YPPLGRFAVRDMRQTVAVGVIK+VDKK
Sbjct:  337 AAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKK 444
[Close]
BLAST of CK932666 vs. ExPASy Swiss-Prot
Match: EF1A_ONCVO (Elongation factor 1-alpha OS=Onchocerca volvulus PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.594e-43
Identity = 83/115 (72.17%), Postives = 96/115 (83.48%), Query Frame = 2 
Query:    5 AKGASNFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFAEILTKIDRRSGKELEKEPKFLKNGDAGFVKMIPTKPMVVETFSEYPPLGRFAVRDMRQTVAVGVIKSVDKKDPSG 349
            AK    FT+QVIIMNHPGQI  GY PVLDCHT+HIA KFAE+  K+DRRSGK++E  PK LK+GDAG + +IPTKP+ VETF+EYPPLGRFAVRDMRQTVAVGVIK+VDK +  G
Sbjct:  334 AKETKMFTAQVIIMNHPGQISAGYTPVLDCHTAHIACKFAELKEKVDRRSGKKVEDNPKSLKSGDAGIIDLIPTKPLCVETFTEYPPLGRFAVRDMRQTVAVGVIKNVDKSEGVG 448
The following BLAST results are available for this feature:
BLAST of CK932666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 167
Match NameE-valueIdentityDescription
EF1A1_RAT3.518e-4377.78Elongation factor 1-alpha 1 OS=Rattus norvegicus G... [more]
EF1A1_RABIT3.518e-4377.78Elongation factor 1-alpha 1 OS=Oryctolagus cunicul... [more]
EF1A1_PONAB3.518e-4377.78Elongation factor 1-alpha 1 OS=Pongo abelii GN=EEF... [more]
EF1A1_PANTR3.518e-4377.78Elongation factor 1-alpha 1 OS=Pan troglodytes GN=... [more]
EF1A1_MOUSE3.518e-4377.78Elongation factor 1-alpha 1 OS=Mus musculus GN=Eef... [more]
EF1A1_HUMAN3.518e-4377.78Elongation factor 1-alpha 1 OS=Homo sapiens GN=EEF... [more]
EF1A1_FELCA3.518e-4377.78Elongation factor 1-alpha 1 OS=Felis catus GN=EEF1... [more]
EF1A1_CRIGR3.518e-4377.78Elongation factor 1-alpha 1 OS=Cricetulus griseus ... [more]
EF1A1_BOVIN3.518e-4377.78Elongation factor 1-alpha 1 OS=Bos taurus GN=EEF1A... [more]
EF1A_ONCVO4.594e-4372.17Elongation factor 1-alpha OS=Onchocerca volvulus P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004531_A07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932666 ID=CK932666; Name=CK932666; organism=Citrus sinensis; type=EST; length=792bp
GGGCGCCAAGGGGGCATCCAACTTCACCTCCCAAGTTATCATCATGAACC
ACCCTGGCCAGATTGGAAACGGTTATGCACCTGTTCTTGATTGCCACACT
TCCCACATAGCTGTCAAGTTTGCTGAAATCTTGACCAAGATTGACAGGCG
ATCTGGTAAGGAGCTGGAGAAGGAGCCCAAATTCTTAAAGAATGGTGATG
CTGGGTTTGTTAAGATGATTCCCACCAAGCCTATGGTTGTGGAAACTTTC
TCCGAATATCCCCCACTTGGTCGTTTTGCTGTGAGAGACATGCGCCAGAC
CGTCGCTGTTGGAGTCATCAAGAGCGTGGACAAGAAGGATCCATCTGGAG
CCAAGGTAACCAAGTCTGCTGTGAAGAAGAAGTGAACTGTGCTGGTATCT
TTGTCTGCAAGTAATGTCTATAGGCGTCATCACAATAAAGATTGTGTTCT
TTTTAGGCATAAATGTGTTGGATGTTTGGGTCGTCAATTTGCTGGTTATA
ATTACAATTCGTCACCATCGACAAGAGACTTTTGTTCACAGAACTGGGTT
CTTGATCGGCGGTGGCGAGATTACTGTATTGAGTCTATTTTTGTTGTCCA
TGTCATGTTCAAACTTGGATATTTTGTAAGCAGCTCAGGAGTTTTAGGTC
TCTGCTGAGCTCCTTAAGATGTTGTTTGTTGATGTTTTATGTTCTATCTA
GTTTGCCATTTTCCNAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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