CK932688

Overview
NameCK932688
Unique NameCK932688
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length423
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_GORGO (Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_GEOCY (Ubiquitin OS=Geodia cydonium PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_FELCA (Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_DROME (Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_CRIGR (Ubiquitin OS=Cricetulus griseus PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_CHICK (Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata PE=1 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
[Close]
BLAST of CK932688 vs. ExPASy Swiss-Prot
Match: UBIQ_CAVPO (Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.220e-23
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 3 
Query:    6 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 167
            I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
The following BLAST results are available for this feature:
BLAST of CK932688 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
UBIQ_GORGO2.220e-2396.30Ubiquitin OS=Gorilla gorilla gorilla GN=UBB PE=3 S... [more]
UBIQ_GEOCY2.220e-2396.30Ubiquitin OS=Geodia cydonium PE=3 SV=1[more]
UBIQ_FELCA2.220e-2396.30Ubiquitin OS=Felis catus GN=UBA52 PE=3 SV=1[more]
UBIQ_EIMBO2.220e-2396.30Ubiquitin OS=Eimeria bovis PE=2 SV=1[more]
UBIQ_DROME2.220e-2396.30Ubiquitin OS=Drosophila melanogaster GN=RpL40 PE=1... [more]
UBIQ_DICDI2.220e-2396.30Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1... [more]
UBIQ_CRIGR2.220e-2396.30Ubiquitin OS=Cricetulus griseus PE=3 SV=1[more]
UBIQ_CHICK2.220e-2396.30Ubiquitin OS=Gallus gallus GN=UBA52 PE=3 SV=1[more]
UBIQ_CERCA2.220e-2396.30Ubiquitin OS=Ceratitis capitata PE=1 SV=1[more]
UBIQ_CAVPO2.220e-2396.30Ubiquitin OS=Cavia porcellus GN=RPS27A PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_G10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932688 ID=CK932688; Name=CK932688; organism=Citrus sinensis; type=EST; length=423bp
GGGCAATTGACAATGTGAAGGCTAAGATCCAGGATAAGGAGGGGATTCCC
CCAGACCAGCAGAGGTTGATCTTTGCTGGAAAACAACTTGAGGATGGAAG
GACTCTTGCTGATTACAACATCCAGAAGGAGTCCACTCTGCATCTTGTGC
TCCGACTCCGTGGAGGTTTCTGAGTTTGGTCATCTGGGTGTGTGTGTGTC
TTATTTGCTTCGGTTTGTCTTGGTTAATGTTTGCTGGCTATTGGTGAAAT
AGCTTAAATAACTATTTGAAGTTTATTTTGGTTTGTGGTAGTTGAACTCT
GTTTCTAAGATATTGATATGGTCCCACTAACGTCCCATTATAATATCTAA
GAATCTTTTTCTTGAATAAATACATGTTTAATGTGCAGTACCAGAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA
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