CK932690
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_DROME (DNA polymerase alpha catalytic subunit OS=Drosophila melanogaster GN=DNApol-alpha180 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 4.118e-28 Identity = 75/205 (36.59%), Postives = 115/205 (56.10%), Query Frame = 1 Query: 22 SERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQLN---KDRKEVGPHDVLKMFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDK 627 SERALL+ + + K+D+D++V + L+V+ + ++P WS++GRL+ S+ FG ++ GR++CD + + +R SY L L K L +R EV D+L+M++ ES+ +LI D + LM L+++PL Q+TNI GN +TLQG R++R E+LLLHAFH K YIVPDK Sbjct: 639 SERALLSWFLAQYQKIDADLIVTFDSMDCQLNVITDQIVALKIPQ--WSRMGRLRLSQS---------FGKR----LLEHFVGRMVCDVKRSAEECIRARSYDLQTLCKQVLKLKESERMEVNADDLLEMYEKGESITKLISLTMQDNSYLLRLMCELNIMPLALQITNICGNTMTRTLQGGRSERNEFLLLHAFHEKNYIVPDK 828
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOLA_TRYBB (DNA polymerase alpha catalytic subunit OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.565e-27 Identity = 80/212 (37.74%), Postives = 122/212 (57.55%), Query Frame = 1 Query: 22 SERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIM--SCIAGRLLCDTFLCSRDLLREVSYSLTQLAKTQL-------NKDRKEVGPHDVLK-MFQTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDK 627 +ERALL L LD D++VGHNI G+ ++ LL+R Q + WS IGRL P+++ G+ + I +C+ GRL+ DT+L +R+ + +Y L L+ TQ+ N+ E G ++K + E+L ++ A LS + L V+PLT++LT ++GNLW +TL GAR++R+EYLLLHAFH K++ PDK Sbjct: 506 NERALLTWFAETLAALDPDIIVGHNIIGYTVETLLNRYQELNIVR--WSTIGRLDVRRFPRIQ------GNNFNLAIEKEACV-GRLVVDTYLLAREYYKSTNYKLLSLS-TQMEIKGITDNRGHFEPGSTVLVKDSMMSSEALCPILLQLLNCAVLSFNVASFLDVIPLTKRLTLLAGNLWSRTLYGARSERIEYLLLHAFHNLKFVTPDK 707
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOA_SCHPO (DNA polymerase alpha catalytic subunit OS=Schizosaccharomyces pombe GN=pol1 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.854e-26 Identity = 80/232 (34.48%), Postives = 122/232 (52.59%), Query Frame = 1 Query: 13 CESSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPGIMSCIAGRLLCDTFL-CSRDLLREVSYSLTQLAKTQLNKDRKEVGPHDVLKMF-QTLESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTYVKETKMAKQRINHGVEDRNVEE 702 CE SE +LLN + ++ D DV GH+ VLL R + ++ + WS IGRL+RSE P R+ S IAGRL+CD R +++ S+SL+++ +L+ R+++ L+ + T L++ + + E D + + F + +L L++ LTNI+GN W +TL G RA+R EY+LLH F YIVPDK ++ A G ED EE Sbjct: 598 CERSEVSLLNNFLNKVRTYDPDVYFGHDFE-MCYSVLLSRLKERKIHN--WSSIGRLRRSEWP-----RSFNRSSQQFVEKQIIAGRLMCDLSNDFGRSMIKAQSWSLSEIVLKELDIKRQDINQEKALQSWTDTAHGLLDYLVHCEIDTFFIAAVAFKIQMLQLSKNLTNIAGNSWARTLTGTRAERNEYILLHEFKKNGYIVPDKQQSIRRHAEA-----FGAEDGLQEE 816
BLAST of CK932690 vs. ExPASy Swiss-Prot
Match: DPOA_YEAST (DNA polymerase alpha catalytic subunit A OS=Saccharomyces cerevisiae GN=POL1 PE=1 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 8.317e-21 Identity = 75/233 (32.19%), Postives = 115/233 (49.36%), Query Frame = 1 Query: 19 SSERALLNRLMIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSEMPKLRKGRTIFGSGASPG----IMSCIAGRLLCDTFLCSRDLLREV--SYSLTQLAKTQLNKDRKEVGPHDVLKMFQT-LESLMELIEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKYIVPDKFTYVKETKMAKQRINHGVEDRNV 696 ++E+A+L+ L D DV++GH + LDVL HR +P+ +S IGR R P+ FG G S I +GRL+CD L S+ L+++ + K+ K + +Q + S+ ++ T+ +S E+ + + +L LT+QLTN++GN W +TL G RA R EY+LLH F +IVPDK ++ KQR N D V Sbjct: 614 NNEKAMLSCFCAMLKVEDPDVIIGHRLQNVYLDVLAHRMHDLNIPT--FSSIGRRLRRTWPEK------FGRGNSNMNHFFISDICSGRLICDIANEMGQSLTPKCQSWDLSEMYQVTCEKEHKPLDIDYQNPQYQNDVNSMTMALQENITNCMISAEVSYRIQLLTLTKQLTNLAGNAWAQTLGGTRAGRNEYILLHEFSRNGFIVPDK--EGNRSRAQKQRQNEENADAPV 836 The following BLAST results are available for this feature:
BLAST of CK932690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932690 ID=CK932690; Name=CK932690; organism=Citrus sinensis; type=EST; length=784bpback to top |