CK932691

Overview
NameCK932691
Unique NameCK932691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_CHICK (Triosephosphate isomerase OS=Gallus gallus GN=TPI1 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.237e-38
Identity = 79/140 (56.43%), Postives = 96/140 (68.57%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            KFFVGGNWK NG K+S+ +L+  LN AKL            +Y+D  +  L  +I +AAQN +    GAFTGEIS   +KDIG  WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T  V F
Sbjct:    5 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVF 144          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_ARATH (Triosephosphate isomerase, cytosolic OS=Arabidopsis thaliana GN=CTIMC PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.237e-38
Identity = 74/140 (52.86%), Postives = 99/140 (70.71%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            KFFVGGNWKCNGT E + K+V+ LN+A++  +          +V++  VK++L     +AAQN WV KGGAFTGE+S E L ++   WV+LGHSERR ++ E  +F+G K AYAL++GL VIAC+GE L+EREAG T DV
Sbjct:    4 KFFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAAQNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKVIACVGETLEEREAGSTMDV 143          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_ORYLA (Triosephosphate isomerase OS=Oryzias latipes GN=tpi1 PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.439e-38
Identity = 77/140 (55.00%), Postives = 95/140 (67.86%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            +FFVGGNWK NG KES+ +L+S LN A L            +Y+D  ++ L  RI +AAQN +    GAFTGEIS   +KD G  WV+LGHSERRHV GE+D+ IG+K A+AL   L VIACIGE+L+EREAG T DV F
Sbjct:    5 RFFVGGNWKMNGNKESLEELMSTLNTASLHEDTEVVCAAPSIYLDFARSGLDSRISVAAQNCYKVAKGAFTGEISPAMIKDCGADWVILGHSERRHVFGENDELIGQKVAHALESDLSVIACIGEKLEEREAGTTEDVIF 144          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_RABIT (Triosephosphate isomerase OS=Oryctolagus cuniculus GN=TPI1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37
Identity = 79/140 (56.43%), Postives = 95/140 (67.86%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            KFFVGGNWK NG K+++ +L++ LN AK+             YID  +  L  +I +AAQN +    GAFTGEIS   +KD G  WVVLGHSERRHV GE D+ IG+K A+ALSEGLGVIACIGE+L EREAG T  V F
Sbjct:    5 KFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVF 144          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PONAB (Triosephosphate isomerase OS=Pongo abelii GN=TPI1 PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37
Identity = 79/140 (56.43%), Postives = 94/140 (67.14%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            KFFVGGNWK NG K+S+ +L+  LN AK+             YID  +  L  +I +AAQN +    GAFTGEIS   +KD G  WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T  V F
Sbjct:    6 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDYGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVF 145          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PANTR (Triosephosphate isomerase OS=Pan troglodytes GN=TPI1 PE=2 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37
Identity = 79/140 (56.43%), Postives = 94/140 (67.14%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            KFFVGGNWK NG K+S+ +L+  LN AK+             YID  +  L  +I +AAQN +    GAFTGEIS   +KD G  WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T  V F
Sbjct:    6 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVF 145          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_HUMAN (Triosephosphate isomerase OS=Homo sapiens GN=TPI1 PE=1 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37
Identity = 79/140 (56.43%), Postives = 94/140 (67.14%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            KFFVGGNWK NG K+S+ +L+  LN AK+             YID  +  L  +I +AAQN +    GAFTGEIS   +KD G  WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T  V F
Sbjct:    6 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVF 145          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_HORVU (Triosephosphate isomerase, cytosolic OS=Hordeum vulgare PE=1 SV=3)

HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37
Identity = 73/140 (52.14%), Postives = 97/140 (69.29%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKL--EXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            KFFVGGNWKCNGT E +  +V  LN  ++             +V++  VK  L   I++AAQN WV KGGAFTGE+S E L ++G  WV+LGHSERR ++GE  +F+G+K AYAL++GL VIAC+GE L++REAG T +V
Sbjct:    4 KFFVGGNWKCNGTVEQVEAIVQTLNAGQIVSPDVVEVVVSPPYVFLPIVKAKLRPEIQVAAQNCWVKKGGAFTGEVSAEMLANLGVPWVILGHSERRSLLGESSEFVGEKVAYALAQGLKVIACVGETLEQREAGSTMEV 143          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_GORGO (Triosephosphate isomerase OS=Gorilla gorilla gorilla GN=TPI1 PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37
Identity = 79/140 (56.43%), Postives = 94/140 (67.14%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            KFFVGGNWK NG K+S+ +L+  LN AK+             YID  +  L  +I +AAQN +    GAFTGEIS   +KD G  WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVIACIGE+L EREAG T  V F
Sbjct:    6 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTKVVCAPPTAYIDFARQKLDPKIAVAAQNCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVF 145          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPISA_DANRE (Triosephosphate isomerase A OS=Danio rerio GN=tpi1a PE=2 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.610e-37
Identity = 77/140 (55.00%), Postives = 93/140 (66.43%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            KFFVGGNWK NG KES+ +L+  LN A L            +Y+D  ++ L  RI +AAQN +    GAFTGEIS   +KD G  WV+LGHSERRHV GE D+ IG+K A+ L   LGVIACIGE+L+EREAG T DV F
Sbjct:    5 KFFVGGNWKMNGDKESLGELIMTLNTASLNDETDVVCGAPSIYLDYARSKLDQRIGVAAQNCYKVPKGAFTGEISPAMIKDCGIDWVILGHSERRHVFGESDELIGQKVAHCLESDLGVIACIGEKLEEREAGTTEDVVF 144          
The following BLAST results are available for this feature:
BLAST of CK932691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_CHICK4.237e-3856.43Triosephosphate isomerase OS=Gallus gallus GN=TPI1... [more]
TPIS_ARATH4.237e-3852.86Triosephosphate isomerase, cytosolic OS=Arabidopsi... [more]
TPIS_ORYLA9.439e-3855.00Triosephosphate isomerase OS=Oryzias latipes GN=tp... [more]
TPIS_RABIT1.610e-3756.43Triosephosphate isomerase OS=Oryctolagus cuniculus... [more]
TPIS_PONAB1.610e-3756.43Triosephosphate isomerase OS=Pongo abelii GN=TPI1 ... [more]
TPIS_PANTR1.610e-3756.43Triosephosphate isomerase OS=Pan troglodytes GN=TP... [more]
TPIS_HUMAN1.610e-3756.43Triosephosphate isomerase OS=Homo sapiens GN=TPI1 ... [more]
TPIS_HORVU1.610e-3752.14Triosephosphate isomerase, cytosolic OS=Hordeum vu... [more]
TPIS_GORGO1.610e-3756.43Triosephosphate isomerase OS=Gorilla gorilla goril... [more]
TPISA_DANRE1.610e-3755.00Triosephosphate isomerase A OS=Danio rerio GN=tpi1... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_H01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932691 ID=CK932691; Name=CK932691; organism=Citrus sinensis; type=EST; length=663bp
GGGGACACAAAGGCTCATCAAGAGGAAGGGCAAGAGCCAACGCAGCTGNN
ATTATAATTTGACTTTCACTTTGACTTTTCACAATGGCGTCAATGATCTC
CACAAACTGCGCTCAATTCTCCGGCTTGCGCCGCTCATCGCCCACACAGT
CTTATTCACAGCACGTCAACTCTCACCTCCGCCTTGTCTCTTCTCGTAGA
CCTCGCCGTAGCAGCAGCGTTGTCGCCATGGCCAGCTCCAACAAGTTCTT
TGTTGGGGGAAACTGGAAGTGTAATGGAACAAAGGAGTCTATCACCAAGC
TTGTTTCGGACCTGAACGATGCAAAGTTGGAGGCTGATGTTGATGTTGTG
GTAGCGCCTCCCTTTGTTTACATTGATCAAGTGAAGAATTCATTAACAGA
TAGAATTGAGATAGCAGCTCAGAACTCTTGGGTCGGAAAAGGTGGAGCAT
TTACAGGAGAAATCAGTGTGGAACAACTGAAAGATATTGGCTGCAAGTGG
GTTGTTTTGGGGCATTCTGAGCGCAGACATGTTATTGGTGAAGATGATCA
GTTTATAGGGAAGAAAGCTGCCTATGCCTTGAGCGAGGGACTTGGTGTCA
TAGCTTGTATCGGGGAACAGTTGCAAGAAAGAGAAGCAGGGAAAACTTTT
GATGTCTGTTTTC
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