CK932691

Overview
NameCK932691
Unique NameCK932691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PSEU5 (Triosephosphate isomerase OS=Pseudomonas stutzeri (strain A1501) GN=tpiA PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.113e-25
Identity = 57/137 (41.61%), Postives = 86/137 (62.77%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKG-GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            V GNWK NGT+ S+ +L+       L           FV++ QV + +   ++ + AQ+  +  G GA TGE+S +QL D+GC+WV++GHSERR V+GE D+ + +K A A + GL  + C+GE L+EREAG+T +V
Sbjct:    6 VAGNWKMNGTRASVAELIESFRRQALPAAVEIAVFPSFVHVSQVLDVVDGVQVSVGAQDCALQSGFGALTGEVSADQLVDLGCEWVLVGHSERRLVLGETDEVVSQKFAAAQAGGLKPVLCLGETLEEREAGRTLEV 142          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPG (Triosephosphate isomerase OS=Pseudomonas putida (strain GB-1) GN=tpiA PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 62/137 (45.26%), Postives = 88/137 (64.23%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVG-KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            V GNWK +GT+ S+ +L   L++  L            ++I+QV + L  + I + AQNS V  + GA TGE++ EQL + GCK V++GHSERR VIGE D+ + +K A A ++GL  + CIGE L+EREAGKT +V
Sbjct:    6 VAGNWKMHGTRASVAELTEGLSNLALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQVIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEV 142          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_COPC7 (Triosephosphate isomerase OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=TPI PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 62/139 (44.60%), Postives = 82/139 (58.99%), Query Frame = 3
Query:  246 FFVGGNWKCNGTKESITK-LVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVC 659
            FFVGGNWK N T  S  K LV  LN A L+           +Y+  ++      +++AAQN++  + GAFTGEIS +Q+ D G  +V+LGHSERR +  E  + +  K   AL  GL VI CIGE L+ERE G+T  VC
Sbjct:    5 FFVGGNWKLNPTSLSAAKALVEALNKADLDPSTEVVVAPPALYLLPIQEIAGKAVKVAAQNAYFKESGAFTGEISPKQISDAGIPYVILGHSERRTLFHETSEVVALKTRAALDNGLKVILCIGETLKEREEGRTAAVC 143          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_AEDTO (Triosephosphate isomerase (Fragment) OS=Aedes togoi GN=Tpi PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.372e-25
Identity = 61/125 (48.80%), Postives = 75/125 (60.00%), Query Frame = 3
Query:  288 SITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            SI +L   L    L             Y+   ++ L D + +AAQN +    GAFTGEIS   LKD+   WV+LGHSERR + GE D+ I  K A+AL+EGL VIACIGE LQEREAG+T  VCF
Sbjct:    1 SIAELCKVLTTGPLNADTEVVVGCPAPYLTLARSQLPDSVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESDELIADKVAHALAEGLKVIACIGETLQEREAGQTEAVCF 125          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPK (Triosephosphate isomerase OS=Pseudomonas putida (strain KT2440) GN=tpiA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25
Identity = 61/137 (44.53%), Postives = 88/137 (64.23%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVG-KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            V GNWK +GT+ S+ +L   L++  L            ++I+QV + L  + I + AQNS V  + GA TGE++ EQL + GCK V++GHSERR +IGE D+ + +K A A ++GL  + CIGE L+EREAGKT +V
Sbjct:    6 VAGNWKMHGTRASVAELTKGLSNLALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEV 142          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PSEP1 (Triosephosphate isomerase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=tpiA PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 7.017e-25
Identity = 61/137 (44.53%), Postives = 88/137 (64.23%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVG-KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            V GNWK +GT+ S+ +L   L++  L            ++I+QV + L  + I + AQNS V  + GA TGE++ EQL + GCK V++GHSERR +IGE D+ + +K A A ++GL  + CIGE L+EREAGKT +V
Sbjct:    6 VAGNWKMHGTRASVAELTKGLSNLALPSGVEVAVFPPALFINQVIDGLAGKEITVGAQNSAVQPEQGALTGEVAPEQLVEAGCKLVLIGHSERRQIIGETDEVLNRKFAAAQAKGLKPVLCIGETLEEREAGKTLEV 142          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_CULPI (Triosephosphate isomerase (Fragment) OS=Culex pipiens GN=Tpi PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.548e-24
Identity = 60/125 (48.00%), Postives = 73/125 (58.40%), Query Frame = 3
Query:  288 SITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCF 662
            SIT+L   L    L             Y+   ++ L D + +AAQN +    GAFTGEIS   LKD+   WV+LGHSERR + GE  + I  K  +AL+EGL VIACIGE LQEREA KT  VCF
Sbjct:    1 SITELCKVLTTGPLNADTEVVVGCPAPYLSLARSQLPDTVGVAAQNCYKVAKGAFTGEISPAMLKDLNIGWVILGHSERRAIFGESGELIADKIVHALAEGLKVIACIGETLQEREAAKTEAVCF 125          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPW (Triosephosphate isomerase OS=Pseudomonas putida (strain W619) GN=tpiA PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 7.758e-24
Identity = 58/137 (42.34%), Postives = 86/137 (62.77%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVG-KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            V GNWK +GT+ S+ +L   L +  +            ++I++V + L  + I + AQNS V  + GA TGE++  QL ++GCK+V++GHSERR VIGE ++ + +K A A   GL  + CIGE L+EREAGKT +V
Sbjct:    6 VAGNWKMHGTRASVAELTQGLGNMLIPEGIEVAVFPPALFINEVIDGLKGKGITVGAQNSAVQPEQGALTGEVAPSQLAEVGCKFVLIGHSERRQVIGESEEVLNRKFAAAQKSGLTPVLCIGETLEEREAGKTLEV 142          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_LAWIP (Triosephosphate isomerase OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=tpiA PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.013e-23
Identity = 63/138 (45.65%), Postives = 78/138 (56.52%), Query Frame = 3
Query:  243 KFFVGGNWKCNGT----KESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAG 641
            K  +  NWK N      K+ I KL+S      +           F+ ID +K  L +  I I AQN +    GAFTGEIS+E LKD+GC WV++GHSERRH+IGE    I +K   ALS G  +I CIGE  QEREAG
Sbjct:    2 KILIAANWKMNKNRLEAKDMIEKLMS--MPEGIPPQRDIVLFPPFLAIDTIKEKLKNSTIVIGAQNFYPAPSGAFTGEISLEMLKDVGCSWVLIGHSERRHIIGELPTLIEQKTKLALSYGFSIILCIGETAQEREAG 137          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_SCHPO (Triosephosphate isomerase OS=Schizosaccharomyces pombe GN=tpi1 PE=1 SV=4)

HSP 1 Score: 109.768 bits (273), Expect = 1.323e-23
Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXF-VYIDQVKNSLTDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            KFFVGGN+K NG+ ES+  ++  LN  KL             +Y+   +  +   I + AQN +  K GA+TGE S + L D G  + + GHSERR +  E D+F+  K  +AL +GL V+ACIGE L EREA +T +V
Sbjct:    4 KFFVGGNFKMNGSLESMKTIIEGLNTTKLNVGDVETVIFPQNMYLITTRQQVKKDIGVGAQNVFDKKNGAYTGENSAQSLIDAGITYTLTGHSERRTIFKESDEFVADKTKFALEQGLTVVACIGETLAEREANETINV 142          
The following BLAST results are available for this feature:
BLAST of CK932691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_PSEU54.113e-2541.61Triosephosphate isomerase OS=Pseudomonas stutzeri ... [more]
TPIS_PSEPG5.372e-2545.26Triosephosphate isomerase OS=Pseudomonas putida (s... [more]
TPIS_COPC75.372e-2544.60Triosephosphate isomerase OS=Coprinopsis cinerea (... [more]
TPIS_AEDTO5.372e-2548.80Triosephosphate isomerase (Fragment) OS=Aedes togo... [more]
TPIS_PSEPK7.017e-2544.53Triosephosphate isomerase OS=Pseudomonas putida (s... [more]
TPIS_PSEP17.017e-2544.53Triosephosphate isomerase OS=Pseudomonas putida (s... [more]
TPIS_CULPI4.548e-2448.00Triosephosphate isomerase (Fragment) OS=Culex pipi... [more]
TPIS_PSEPW7.758e-2442.34Triosephosphate isomerase OS=Pseudomonas putida (s... [more]
TPIS_LAWIP1.013e-2345.65Triosephosphate isomerase OS=Lawsonia intracellula... [more]
TPIS_SCHPO1.323e-2341.73Triosephosphate isomerase OS=Schizosaccharomyces p... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_H01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932691 ID=CK932691; Name=CK932691; organism=Citrus sinensis; type=EST; length=663bp
GGGGACACAAAGGCTCATCAAGAGGAAGGGCAAGAGCCAACGCAGCTGNN
ATTATAATTTGACTTTCACTTTGACTTTTCACAATGGCGTCAATGATCTC
CACAAACTGCGCTCAATTCTCCGGCTTGCGCCGCTCATCGCCCACACAGT
CTTATTCACAGCACGTCAACTCTCACCTCCGCCTTGTCTCTTCTCGTAGA
CCTCGCCGTAGCAGCAGCGTTGTCGCCATGGCCAGCTCCAACAAGTTCTT
TGTTGGGGGAAACTGGAAGTGTAATGGAACAAAGGAGTCTATCACCAAGC
TTGTTTCGGACCTGAACGATGCAAAGTTGGAGGCTGATGTTGATGTTGTG
GTAGCGCCTCCCTTTGTTTACATTGATCAAGTGAAGAATTCATTAACAGA
TAGAATTGAGATAGCAGCTCAGAACTCTTGGGTCGGAAAAGGTGGAGCAT
TTACAGGAGAAATCAGTGTGGAACAACTGAAAGATATTGGCTGCAAGTGG
GTTGTTTTGGGGCATTCTGAGCGCAGACATGTTATTGGTGAAGATGATCA
GTTTATAGGGAAGAAAGCTGCCTATGCCTTGAGCGAGGGACTTGGTGTCA
TAGCTTGTATCGGGGAACAGTTGCAAGAAAGAGAAGCAGGGAAAACTTTT
GATGTCTGTTTTC
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