CK932691

Overview
NameCK932691
Unique NameCK932691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6053 contig Csv1_Contig6053:1..660. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_THEPX (Triosephosphate isomerase OS=Thermoanaerobacter sp. (strain X514) GN=tpiA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 56/136 (41.18%), Postives = 76/136 (55.88%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            + GNWK + T     KLV +L     +          FV + +V   +    I + AQ+ +  + GA+TGEIS   LK+IG K+VV+GHSERR   GE D+ + KK   ALS GL  I C+GE   +RE GKTF+V
Sbjct:    6 IAGNWKMHMTPSEAVKLVDELIPQVKDAKAEVVVIPPFVDLTEVNKVIQGTNILLGAQDMFWEEKGAYTGEISPLMLKEIGVKYVVIGHSERRQYFGETDEMVNKKVLSALSHGLSPIVCVGESFSQREEGKTFEV 141          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_RUTMC (Triosephosphate isomerase OS=Ruthia magnifica subsp. Calyptogena magnifica GN=tpiA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 53/139 (38.13%), Postives = 79/139 (56.83%), Query Frame = 3
Query:  243 KFFVGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTD-RIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            +  + GNWK N +KE+   LV  +     +           +Y+ QV+  + D ++ + AQN  V K GAFTGEIS + +KD G K+V++GHSERR + GE D+ + +K   AL   L  + CIGE L++RE+  T  V
Sbjct:    3 QIIIAGNWKMNASKEATNTLVIGILSGMADVKSKVIVCVPSLYMSQVEVLVVDSQLNLGAQNLNVNKLGAFTGEISADMIKDFGAKYVIVGHSERRSLYGETDEIVAQKVQVALDNNLTPLFCIGELLEDRESNNTKSV 141          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA7 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain PA7) GN=tpiA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 59/137 (43.07%), Postives = 77/137 (56.20%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSLTDR-IEIAAQNSWVGK-GGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            V GNWK +GT  S+  L+  L    L            ++I QV   L  + I + AQNS V    GA TGEI+  QL D GC  V++GHSERR ++GE D+ + +K A A S GL  + C+GE   EREAGKT +V
Sbjct:    6 VAGNWKMHGTHSSVADLIKGLRQLALPSGVDVAVMPPCLFISQVVQGLAGKAIGVGAQNSAVEPMQGALTGEIAPSQLADAGCGMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEV 142          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPC (Triosephosphate isomerase OS=Legionella pneumophila (strain Corby) GN=tpiA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 54/134 (40.30%), Postives = 78/134 (58.21%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDA-KLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKT 647
            V GNWK NG  + +T+LVS + +    +           +YI +V++ L T RI + AQN +    GA+TGE+S   LKD  C++V++GHSERR    ED+ F+ +K  +    G+  I C+GE L ERE GKT
Sbjct:    6 VAGNWKMNGQIQQVTELVSQIEELIGFDCAAQVAVMPPSIYIPKVRDCLRTGRIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPILCVGETLSERENGKT 139          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_ENTCL (Triosephosphate isomerase OS=Enterobacter cloacae GN=tpiA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.618e-21
Identity = 59/138 (42.75%), Postives = 79/138 (57.25%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVC 659
            V GNWK NG++  + +LV++L  +               +Y+D  K++     I + AQN  V   GAFTGE S E LKDIG K++++GHSERR    E D+FI KK A    +GL  + CIGE   E EAGKT +VC
Sbjct:    6 VMGNWKLNGSRHMVNELVANLRKELAGVTGCAVAIAPPDMYLDLAKHAADGSHIILGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFAVLKEQGLIPVLCIGETEAENEAGKTEEVC 143          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_ERWCT (Triosephosphate isomerase OS=Erwinia carotovora subsp. atroseptica GN=tpiA PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.113e-21
Identity = 58/138 (42.03%), Postives = 75/138 (54.35%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVC 659
            V GNWK NG+   + +L++ L  +               +Y+DQ  + L   RI + AQN  V   GAFTGE S E LKDIG K++++GHSERR    E D+FI KK       GL  + CIGE   E EAG+T  VC
Sbjct:    6 VMGNWKLNGSTNLVNELIAGLRKELSTVDGCGVAIAPPAIYLDQANHQLAGSRIALGAQNVDVNLSGAFTGETSAEMLKDIGAKYIIIGHSERRTYHKESDEFIAKKFGVLKDAGLIPVLCIGETEAENEAGQTEAVC 143          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPH (Triosephosphate isomerase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=tpiA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.604e-21
Identity = 53/137 (38.69%), Postives = 79/137 (57.66%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDA-KLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            V GNWK NG  + +T+LVS + +    +           +YI +V++ L T +I + AQN +    GA+TGE+S   LKD  C++V++GHSERR    ED+ F+ +K  +    G+  + C+GE L ERE GKT  V
Sbjct:    6 VAGNWKMNGQIQQVTELVSQIEELIGFDCAAQVAVMPPSIYIPKVRDCLRTGKIVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPVLCVGETLSERENGKTEQV 142          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_LEGPA (Triosephosphate isomerase OS=Legionella pneumophila (strain Paris) GN=tpiA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.604e-21
Identity = 53/137 (38.69%), Postives = 79/137 (57.66%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDA-KLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            V GNWK NG  + +T+LVS + +    +           +YI +V++ L T ++ + AQN +    GA+TGE+S   LKD  C++V++GHSERR    ED+ F+ +K  +    G+  I C+GE L ERE GKT  V
Sbjct:    6 VAGNWKMNGQIQQVTELVSQIEELIGFDCAAQVAVMPPSIYIPKVRDCLKTGKVVVGAQNVYPKDYGAYTGELSAPMLKDFDCRYVLVGHSERRQFFHEDENFVAQKFHHVKDHGMIPILCVGETLSERENGKTEQV 142          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PSE14 (Triosephosphate isomerase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=tpiA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.706e-21
Identity = 56/137 (40.88%), Postives = 80/137 (58.39%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLNDAKLEXXXXXXXXXXFVYIDQVKNSL-TDRIEIAAQNSWV-GKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDV 656
            V GNWK +GT+ S+ +L+  L    L            ++ +QV   L    I + AQ++ +  + GA TGEI+  QL D GCK V++GHSERR +IGE D  + KK A   + GL  + CIGE L+ER+AG+T +V
Sbjct:    6 VAGNWKMHGTRASVAELIEGLGKQVLPGSVDIAVMPASLFTNQVIEGLRATSIIVGAQDAAIQAEQGALTGEIASSQLADAGCKLVLVGHSERRQLIGEQDDVLNKKFAAIQASGLTPVLCIGETLEERKAGQTLEV 142          
BLAST of CK932691 vs. ExPASy Swiss-Prot
Match: TPIS_PHOLL (Triosephosphate isomerase OS=Photorhabdus luminescens subsp. laumondii GN=tpiA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.706e-21
Identity = 57/138 (41.30%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  252 VGGNWKCNGTKESITKLVSDLN-DAKLEXXXXXXXXXXFVYIDQVKNSLT-DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVC 659
            V GNWK NG+   + +L++ L  +               +Y+ Q K +L   RI + AQ+  V   GAFTGE S   LKDIG +++++GHSERR    E D+FI KK A    +GL  + CIGE  QE EAG+T  VC
Sbjct:    6 VMGNWKLNGSTHMVNELITGLRQELSSVTGCDVAIAPPALYLSQAKQALAGSRIALGAQDVDVNLSGAFTGETSATMLKDIGAEYIIIGHSERRTYHQESDEFIAKKFAILKQQGLIPVLCIGETEQENEAGQTESVC 143          
The following BLAST results are available for this feature:
BLAST of CK932691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TPIS_THEPX1.618e-2141.18Triosephosphate isomerase OS=Thermoanaerobacter sp... [more]
TPIS_RUTMC1.618e-2138.13Triosephosphate isomerase OS=Ruthia magnifica subs... [more]
TPIS_PSEA71.618e-2143.07Triosephosphate isomerase OS=Pseudomonas aeruginos... [more]
TPIS_LEGPC1.618e-2140.30Triosephosphate isomerase OS=Legionella pneumophil... [more]
TPIS_ENTCL1.618e-2142.75Triosephosphate isomerase OS=Enterobacter cloacae ... [more]
TPIS_ERWCT2.113e-2142.03Triosephosphate isomerase OS=Erwinia carotovora su... [more]
TPIS_LEGPH3.604e-2138.69Triosephosphate isomerase OS=Legionella pneumophil... [more]
TPIS_LEGPA3.604e-2138.69Triosephosphate isomerase OS=Legionella pneumophil... [more]
TPIS_PSE144.706e-2140.88Triosephosphate isomerase OS=Pseudomonas syringae ... [more]
TPIS_PHOLL4.706e-2141.30Triosephosphate isomerase OS=Photorhabdus luminesc... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_H01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932691 ID=CK932691; Name=CK932691; organism=Citrus sinensis; type=EST; length=663bp
GGGGACACAAAGGCTCATCAAGAGGAAGGGCAAGAGCCAACGCAGCTGNN
ATTATAATTTGACTTTCACTTTGACTTTTCACAATGGCGTCAATGATCTC
CACAAACTGCGCTCAATTCTCCGGCTTGCGCCGCTCATCGCCCACACAGT
CTTATTCACAGCACGTCAACTCTCACCTCCGCCTTGTCTCTTCTCGTAGA
CCTCGCCGTAGCAGCAGCGTTGTCGCCATGGCCAGCTCCAACAAGTTCTT
TGTTGGGGGAAACTGGAAGTGTAATGGAACAAAGGAGTCTATCACCAAGC
TTGTTTCGGACCTGAACGATGCAAAGTTGGAGGCTGATGTTGATGTTGTG
GTAGCGCCTCCCTTTGTTTACATTGATCAAGTGAAGAATTCATTAACAGA
TAGAATTGAGATAGCAGCTCAGAACTCTTGGGTCGGAAAAGGTGGAGCAT
TTACAGGAGAAATCAGTGTGGAACAACTGAAAGATATTGGCTGCAAGTGG
GTTGTTTTGGGGCATTCTGAGCGCAGACATGTTATTGGTGAAGATGATCA
GTTTATAGGGAAGAAAGCTGCCTATGCCTTGAGCGAGGGACTTGGTGTCA
TAGCTTGTATCGGGGAACAGTTGCAAGAAAGAGAAGCAGGGAAAACTTTT
GATGTCTGTTTTC
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