CK932700

Overview
NameCK932700
Unique NameCK932700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9268 contig Csv1_Contig9268:277..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPPA_DICDI (Mannose-1-phosphate guanyltransferase alpha OS=Dictyostelium discoideum GN=gmppA PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.732e-24
Identity = 39/126 (30.95%), Postives = 71/126 (56.35%), Query Frame = 1
Query:  289 KAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDE--PSKYGVVVMEDSTGKVEKFVEKPK 660
            K   + E++L   +Q  V+  F+ E   +L + I    E + LGTAG L   RD +++      FVL+SD+   +P  ++++FHK HG   +IM T+++    ++YG +V ++ T ++  + EKP+
Sbjct:   50 KVENMKEIILIGFFQESVLSKFISETSKQLNVAIRYINEEKVLGTAGGLYHFRDIILEGGPSEIFVLHSDICCAFPLNDLLQFHKQHGRSCTIMGTEIESAYANQYGCLVRDEKTAELLHYAEKPE 175          

HSP 2 Score: 53.9138 bits (128), Expect = 9.732e-24
Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 2
Query:  164 TMKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQLE*LK 310
            T KA+ILVGG   GTR RPL+L VPK L   A KPMI H IEA  ++E +K
Sbjct:    5 TTKAIILVGGPSKGTRFRPLSLDVPKLLFPIAGKPMIYHHIEACSKVENMK 55          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPAA_XENLA (Mannose-1-phosphate guanyltransferase alpha-A OS=Xenopus laevis GN=gmppa-A PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.994e-23
Identity = 45/128 (35.16%), Postives = 68/128 (53.12%), Query Frame = 1
Query:  289 KAVGVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVMEDSTGKVEKFVEKP 657
            K   + E++L   YQP   LN FL + + +  + I   QE   LGT G +   RD+++    + FFV+N+DV SE+P   M++FHK HGG  S ++        +   YG +V    T +V  +VEKP
Sbjct:   46 KVPNLKEILLIGFYQPNEALNSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVSMLDFHKQHGGSQSYVILGTTANRTQSLNYGCIVANRDTQEVLHYVEKP 173          

HSP 2 Score: 49.2914 bits (116), Expect = 7.994e-23
Identity = 26/50 (52.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  167 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQLE*LK 310
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA  ++  LK
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLK 51          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPAB_XENLA (Mannose-1-phosphate guanyltransferase alpha-B OS=Xenopus laevis GN=gmppa-B PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.040e-22
Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = 1
Query:  289 KAVGVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVMEDSTGKVEKFVEKP 657
            K   + E++L   YQP E + +FL + + +  + I   QE   LGT G +   RD+++    + FFV+N+DV SE+P   M++FHK HGG  S ++        +   YG +V    T +V  +VEKP
Sbjct:   46 KVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSEFPLVPMLDFHKQHGGSQSYVILGTTANRTQSLNYGCIVSNGDTQEVLHYVEKP 173          

HSP 2 Score: 49.2914 bits (116), Expect = 1.040e-22
Identity = 26/50 (52.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  167 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQLE*LK 310
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA  ++  LK
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLK 51          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPPA_XENTR (Mannose-1-phosphate guanyltransferase alpha OS=Xenopus tropicalis GN=gmppa PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.878e-22
Identity = 43/128 (33.59%), Postives = 68/128 (53.12%), Query Frame = 1
Query:  289 KAVGVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMV----TKVDEPSKYGVVVMEDSTGKVEKFVEKP 657
            K   + E++L   YQP E + +FL + + +  + I   QE   LGT G +   RD+++    + FFV+N+DV S +P   M++FHK HGG  S ++        +   YG +V    T +V  +VEKP
Sbjct:   46 KVPNLKEILLIGFYQPNEALSSFLLKAQQEFKVAIRYLQEYSALGTGGGIYHFRDQILSGGPQAFFVMNADVCSAFPLVPMLDFHKQHGGSQSYVILGTTANRSQSLNYGCIVANGETQEVLHYVEKP 173          

HSP 2 Score: 49.2914 bits (116), Expect = 3.878e-22
Identity = 26/50 (52.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  167 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQLE*LK 310
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA  ++  LK
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMVQHHIEACSKVPNLK 51          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPAA_DANRE (Mannose-1-phosphate guanyltransferase alpha-A OS=Danio rerio GN=gmppaa PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.880e-21
Identity = 46/128 (35.94%), Postives = 66/128 (51.56%), Query Frame = 1
Query:  289 KAVGVTEVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSK----YGVVVMEDSTGKVEKFVEKP 657
            K   + E++L   YQP   LN FL   +    I I   QE   LGT G +   RD+++    + FFV+N+DV SE+P  EM++F K HG   S ++       K    YG +V  + T +V  +VEKP
Sbjct:   46 KLPNMKEILLIGFYQPNEELNRFLSCAQQDFKISIRYLQEYAALGTGGGIYHFRDQILSGGPDAFFVMNADVCSEFPLPEMLDFQKEHGDTYSFVILGTTANRKQSLNYGCIVENEQTDEVLHYVEKP 173          

HSP 2 Score: 49.2914 bits (116), Expect = 1.880e-21
Identity = 26/50 (52.00%), Postives = 33/50 (66.00%), Query Frame = 2
Query:  167 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQLE*LK 310
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA  +L  +K
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACSKLPNMK 51          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPPA_MOUSE (Mannose-1-phosphate guanyltransferase alpha OS=Mus musculus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.384e-21
Identity = 42/123 (34.15%), Postives = 67/123 (54.47%), Query Frame = 1
Query:  298 GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVMEDSTGKVEKFVEKP 657
            G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++    E FFVLN+DV S++P + M+E H+       ++ T  +  +   YG +V    T +V  +VEKP
Sbjct:   49 GMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKP 171          

HSP 2 Score: 49.6766 bits (117), Expect = 5.384e-21
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 2
Query:  167 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQL 298
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA  Q+
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQV 47          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPPA_PAPAN (Mannose-1-phosphate guanyltransferase alpha OS=Papio anubis GN=GMPPA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.003e-21
Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 1
Query:  298 GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVMEDSTGKVEKFVEKP 657
            G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++  + E FFVLN+DV S++P + M+E H+       ++ T  +  +   YG +V    T +V  +VEKP
Sbjct:   49 GMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKP 171          

HSP 2 Score: 49.6766 bits (117), Expect = 7.003e-21
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 2
Query:  167 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQL 298
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA  Q+
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQV 47          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPPA_HUMAN (Mannose-1-phosphate guanyltransferase alpha OS=Homo sapiens GN=GMPPA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.003e-21
Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 1
Query:  298 GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVMEDSTGKVEKFVEKP 657
            G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++  + E FFVLN+DV S++P + M+E H+       ++ T  +  +   YG +V    T +V  +VEKP
Sbjct:   49 GMQEILLIGFYQPDEPLTQFLEAAQQEFNLPVRYLQEFAPLGTGGGLYHFRDQILAGSPEAFFVLNADVCSDFPLSAMLEAHRRQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKP 171          

HSP 2 Score: 49.6766 bits (117), Expect = 7.003e-21
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 2
Query:  167 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQL 298
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA  Q+
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQV 47          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPPA_RAT (Mannose-1-phosphate guanyltransferase alpha OS=Rattus norvegicus GN=Gmppa PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.185e-20
Identity = 41/123 (33.33%), Postives = 67/123 (54.47%), Query Frame = 1
Query:  298 GVTEVVLAINYQP-EVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVD--EPSKYGVVVMEDSTGKVEKFVEKP 657
            G+ E++L   YQP E +  FL+  + +  + +   QE  PLGT G L   RD+++    E FFVLN+DV S++P + M++ H+       ++ T  +  +   YG +V    T +V  +VEKP
Sbjct:   49 GMQEILLIGFYQPDEALTQFLEAAQQEFNLPVRYLQEFTPLGTGGGLYHFRDQILAGAPEAFFVLNADVCSDFPLSAMLDAHRLQRHPFLLLGTTANRTQSLNYGCIVENPQTHEVLHYVEKP 171          

HSP 2 Score: 49.6766 bits (117), Expect = 1.185e-20
Identity = 26/46 (56.52%), Postives = 31/46 (67.39%), Query Frame = 2
Query:  167 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQL 298
            +KA+IL+GG   GTR RPL+  VPKPL   A  PMI H IEA  Q+
Sbjct:    2 LKAVILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMIQHHIEACAQV 47          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GMPAB_DANRE (Mannose-1-phosphate guanyltransferase alpha-B OS=Danio rerio GN=gmppab PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.005e-20
Identity = 43/122 (35.25%), Postives = 62/122 (50.82%), Query Frame = 1
Query:  307 EVVLAINYQPEVMLN-FLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHG----GEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKP 657
            E++L   YQP   LN F+   + +  I I   QE   LGT G +   RD+++      FF++N+DV SE+P  EM++FH+ HG    G          +   YG +V    T +V  FVEKP
Sbjct:   52 EIMLIGFYQPNDELNRFIYSAQQEFKIPIRYLQEFAALGTGGGIYHFRDQILSGGPAAFFLMNADVCSEFPLLEMLQFHRQHGENHCGVLLGTTANRTQSLNYGCIVENHETNEVLHFVEKP 173          

HSP 2 Score: 50.447 bits (119), Expect = 2.005e-20
Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 2
Query:  167 MKALILVGG--FGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQLE*LK*FWLL 325
            +KA+IL+GG   GTR RPL+  VPKPL   A  PM+ H IEA  Q+  +K   L+
Sbjct:    2 LKAIILIGGPQKGTRFRPLSFEVPKPLFPVAGVPMLQHHIEACAQVPDMKEIMLI 56          
The following BLAST results are available for this feature:
BLAST of CK932700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
GMPPA_DICDI9.732e-2430.95Mannose-1-phosphate guanyltransferase alpha OS=Dic... [more]
GMPAA_XENLA7.994e-2335.16Mannose-1-phosphate guanyltransferase alpha-A OS=X... [more]
GMPAB_XENLA1.040e-2234.38Mannose-1-phosphate guanyltransferase alpha-B OS=X... [more]
GMPPA_XENTR3.878e-2233.59Mannose-1-phosphate guanyltransferase alpha OS=Xen... [more]
GMPAA_DANRE1.880e-2135.94Mannose-1-phosphate guanyltransferase alpha-A OS=D... [more]
GMPPA_MOUSE5.384e-2134.15Mannose-1-phosphate guanyltransferase alpha OS=Mus... [more]
GMPPA_PAPAN7.003e-2134.15Mannose-1-phosphate guanyltransferase alpha OS=Pap... [more]
GMPPA_HUMAN7.003e-2134.15Mannose-1-phosphate guanyltransferase alpha OS=Hom... [more]
GMPPA_RAT1.185e-2033.33Mannose-1-phosphate guanyltransferase alpha OS=Rat... [more]
GMPAB_DANRE2.005e-2035.25Mannose-1-phosphate guanyltransferase alpha-B OS=D... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_F08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932700 ID=CK932700; Name=CK932700; organism=Citrus sinensis; type=EST; length=660bp
GGGGAGACAACAAAACGCCAAGCAAAAGNNNNNCGCGCGAAGCTCGCCTC
ATCCGTTGACTGAGCTGTCGGTCCCGAGTCACGACTCGCGACTCTTGTTT
TTCAACTCAGTTGTTTGCCGTTCGGATCCGGTCTTAATTAAAGGATAAAG
CAGGCTCCGTATCACAATGAAGGCACTTATTCTTGTTGGAGGGTTCGGAA
CACGGTTGAGGCCGTTGACGCTTAGTGTCCCTAAGCCACTTGTTGAATTT
GCTAACAAACCCATGATCCTGCATCAGATAGAGGCCCTAAGGCAGTTGGA
GTGACTGAAGTAGTTTTGGCTATTAACTACCAGCCAGAGGTGATGTTGAA
CTTTTTGAAGGAATTTGAAGCAAAGCTTGGGATCAAGATCATCTGCTCAC
AAGAGACTGAGCCACTGGGCACTGCTGGTCCTCTGGCTCTGGCTAGAGAC
AAATTGATTGACGATACTGGTGAGCCATTTTTCGTCCTTAACAGTGATGT
TATTAGTGAGTACCCATTTGCAGAAATGATTGAATTCCACAAAGCACATG
GAGGAGAGGCCTCCATCATGGTAACCAAGGTGGATGAGCCATCAAAATAT
GGTGTGGTGGTTATGGAAGACTCTACTGGAAAAGTTGAGAAATTCGTAGA
GAAACCTAAA
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