CK932700

Overview
NameCK932700
Unique NameCK932700
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9268 contig Csv1_Contig9268:277..937. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: MPG1_SULAC (Putative mannose-1-phosphate guanyltransferase OS=Sulfolobus acidocaldarius GN=mpg1 PE=3 SV=2)

HSP 1 Score: 58.5362 bits (140), Expect = 2.205e-14
Identity = 32/120 (26.67%), Postives = 66/120 (55.00%), Query Frame = 1
Query:  301 VTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPK 660
            V  + L++    + +L+ +K+   +  I  +   E   LG AGPL     K   +  +   V+  D+ +E  F +++E+H++ G  A++  T+V++PS+YGV++ +    ++ + +EKPK
Sbjct:   47 VDTIYLSLRVMADKVLDHVKQLNLQKNIVSVI--EESRLGDAGPLKFINSKY--NLSDDVIVVYGDIYAEIDFNKLLEYHQSKGCNATLTATQVEDPSRYGVLITDGH--RLIQIIEKPK 160          

HSP 2 Score: 40.4318 bits (93), Expect = 2.205e-14
Identity = 17/41 (41.46%), Postives = 29/41 (70.73%), Query Frame = 2
Query:  167 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEAL 289
            + A++L GG+ TRLRPL+L+ PK L+    KP++ + + +L
Sbjct:    2 VSAIVLAGGYATRLRPLSLTKPKALLPVLGKPLMDYTLYSL 42          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: STRD_STRGR (Glucose-1-phosphate thymidylyltransferase OS=Streptomyces griseus GN=strD PE=3 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 6.617e-13
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 2
Query:  167 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALR 292
            MKAL+L GG GTRLRP+T +  K LV  ANKP++ + +EA+R
Sbjct:    1 MKALVLAGGTGTRLRPITHTSAKQLVPVANKPVLFYGLEAIR 42          

HSP 2 Score: 42.3578 bits (98), Expect = 6.617e-13
Identity = 31/123 (25.20%), Postives = 63/123 (51.22%), Query Frame = 1
Query:  289 KAVGVTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKP 657
            +A G+ +V + +    + ++  + +  ++ G+K+    +++PLG A  + ++RD L +D    F +   D        + +   +A   +A +M+T+V EP  +GV  + DS G+V    EKP
Sbjct:   42 RAAGIIDVGIVVGDTADEIVAAVGD-GSRFGLKVSYIPQSKPLGLAHCVLISRDFLGED---DFIMYLGDNFVVGVVEDSVREFRAARPDAHLMLTRVPEPRSFGVAELSDS-GQVLGLEEKP 159          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GLMU_METM5 (Bifunctional protein glmU OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0513 PE=3 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 1.874e-12
Identity = 34/120 (28.33%), Postives = 60/120 (50.00%), Query Frame = 1
Query:  301 VTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPK 660
            V ++ L + ++ E ++ +  E       KI    + + LGT   +  A++ + DD    F VLN DVI E    E++++      E ++ ++KVD P  +GV+ +     KV   +EKPK
Sbjct:   45 VEKIYLVVGFEKEKIIEYFNE-----NPKIEYILQEKQLGTGHAVLTAKNFIKDD----FLVLNGDVIFEDSIDEILDY------ENAVALSKVDNPENFGVIEL-GYDNKVINLLEKPK 148          

HSP 2 Score: 45.4394 bits (106), Expect = 1.874e-12
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 2
Query:  167 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEAL 289
            M A+IL  G GTRL P+T S PKP++  A KP++ H IE +
Sbjct:    1 MDAIILCAGKGTRLHPITESRPKPMIPIAGKPILEHIIEKI 41          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GLMU_METMP (Bifunctional protein glmU OS=Methanococcus maripaludis GN=MMP1076 PE=3 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 5.327e-12
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 2
Query:  167 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEAL 289
            M A+IL  G GTRL P+T S PKP++  A KP+I H IE +
Sbjct:    1 MDAIILCAGKGTRLHPITESRPKPMIPIAGKPIIEHIIEKI 41          

HSP 2 Score: 44.669 bits (104), Expect = 5.327e-12
Identity = 33/120 (27.50%), Postives = 59/120 (49.17%), Query Frame = 1
Query:  301 VTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPK 660
            V ++ L + YQ E ++++ K+       KI    + + LGT   +  A++ +  D    F VLN DVI E    E++ +      E ++ ++ VD P  +GV+ +     K+   +EKPK
Sbjct:   45 VEKIYLIVGYQKEKIIDYFKD-----NPKIEYILQEKQLGTGHAVLTAKNFIKGD----FLVLNGDVIFEDSIDEILNY------ENAVSLSNVDNPENFGVIEL-GYDNKIINLLEKPK 148          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GLMU_METJA (Bifunctional protein glmU OS=Methanocaldococcus jannaschii GN=glmU PE=1 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 5.329e-12
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 2
Query:  167 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEALRQL 298
            M A+IL  G G RLRPLT + PKP++  A KP++ H IE +  L
Sbjct:    1 MDAIILCAGKGERLRPLTENRPKPMIPIAGKPILQHIIEKVEDL 44          

HSP 2 Score: 44.669 bits (104), Expect = 5.329e-12
Identity = 33/120 (27.50%), Postives = 58/120 (48.33%), Query Frame = 1
Query:  301 VTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPK 660
            V  + L + Y+ E ++++ K        KI   ++ E  GT   +  A+D + D+    F V+N D+I E    E +++  A      + V +V  P  +GVVV++D    +E   EKP+
Sbjct:   45 VDNIYLIVKYKKEKIVDYFKNHP-----KIKFLEQGEIDGTGQAVLTAKDYVDDE----FLVINGDIIFEDDLEEFLKYKYA------VAVKEVKNPENFGVVVLDDENNIIE-LQEKPE 148          
BLAST of CK932700 vs. ExPASy Swiss-Prot
Match: GLMU_METM7 (Bifunctional protein glmU OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0329 PE=3 SV=1)

HSP 1 Score: 44.669 bits (104), Expect = 1.965e-11
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 2
Query:  167 MKALILVGGFGTRLRPLTLSVPKPLVEFANKPMILHQIEAL 289
            M A+IL  G GTRL P+T S PKP++  A KP++ H IE +
Sbjct:    1 MDAIILCAGKGTRLYPITESRPKPMIPIAGKPILEHIIEKI 41          

HSP 2 Score: 44.2838 bits (103), Expect = 1.965e-11
Identity = 33/120 (27.50%), Postives = 59/120 (49.17%), Query Frame = 1
Query:  301 VTEVVLAINYQPEVMLNFLKEFEAKLGIKIICSQETEPLGTAGPLALARDKLIDDTGEPFFVLNSDVISEYPFAEMIEFHKAHGGEASIMVTKVDEPSKYGVVVMEDSTGKVEKFVEKPK 660
            V ++ L + ++ E ++ + KE       KI    + + LGT   +  A++ + DD    F VLN D+I E    E++ +      E ++ ++KV  P  +GVV +     K+   +EKPK
Sbjct:   45 VEKIYLVVGFEKEKIIEYFKE-----NPKIEYILQEKQLGTGHAVLTAKNFIKDD----FLVLNGDIIFEDSIDEILVY------ENAVALSKVGHPENFGVVEL-GYDNKIINLLEKPK 148          
The following BLAST results are available for this feature:
BLAST of CK932700 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
MPG1_SULAC2.205e-1426.67Putative mannose-1-phosphate guanyltransferase OS=... [more]
STRD_STRGR6.617e-1357.14Glucose-1-phosphate thymidylyltransferase OS=Strep... [more]
GLMU_METM51.874e-1228.33Bifunctional protein glmU OS=Methanococcus maripal... [more]
GLMU_METMP5.327e-1253.66Bifunctional protein glmU OS=Methanococcus maripal... [more]
GLMU_METJA5.329e-1250.00Bifunctional protein glmU OS=Methanocaldococcus ja... [more]
GLMU_METM71.965e-1151.22Bifunctional protein glmU OS=Methanococcus maripal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004530_F08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0001_IVF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932700 ID=CK932700; Name=CK932700; organism=Citrus sinensis; type=EST; length=660bp
GGGGAGACAACAAAACGCCAAGCAAAAGNNNNNCGCGCGAAGCTCGCCTC
ATCCGTTGACTGAGCTGTCGGTCCCGAGTCACGACTCGCGACTCTTGTTT
TTCAACTCAGTTGTTTGCCGTTCGGATCCGGTCTTAATTAAAGGATAAAG
CAGGCTCCGTATCACAATGAAGGCACTTATTCTTGTTGGAGGGTTCGGAA
CACGGTTGAGGCCGTTGACGCTTAGTGTCCCTAAGCCACTTGTTGAATTT
GCTAACAAACCCATGATCCTGCATCAGATAGAGGCCCTAAGGCAGTTGGA
GTGACTGAAGTAGTTTTGGCTATTAACTACCAGCCAGAGGTGATGTTGAA
CTTTTTGAAGGAATTTGAAGCAAAGCTTGGGATCAAGATCATCTGCTCAC
AAGAGACTGAGCCACTGGGCACTGCTGGTCCTCTGGCTCTGGCTAGAGAC
AAATTGATTGACGATACTGGTGAGCCATTTTTCGTCCTTAACAGTGATGT
TATTAGTGAGTACCCATTTGCAGAAATGATTGAATTCCACAAAGCACATG
GAGGAGAGGCCTCCATCATGGTAACCAAGGTGGATGAGCCATCAAAATAT
GGTGTGGTGGTTATGGAAGACTCTACTGGAAAAGTTGAGAAATTCGTAGA
GAAACCTAAA
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